RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W ALG11P53954 548 aaKnown RBP11.33□□□□□ -0.6
MSF1YPR047W HIS4P00815 799 aaKnown RBP11.32□□□□□ -0.6
MSF1YPR047W HXK1P04806 485 aaKnown RBP11.32□□□□□ -0.6
MSF1YPR047W KEX2P13134 814 aa11.32□□□□□ -0.6
MSF1YPR047W MCM3P24279 971 aaKnown RBP11.32□□□□□ -0.6
MSF1YPR047W RAD54P32863 898 aa11.32□□□□□ -0.6
MSF1YPR047W UBP13P38187 747 aa11.32□□□□□ -0.6
MSF1YPR047W MOB1P40484 314 aa11.32□□□□□ -0.6
MSF1YPR047W MGA2P40578 1113 aa11.32□□□□□ -0.6
MSF1YPR047W SHE10P53075 577 aa11.32□□□□□ -0.6
MSF1YPR047W SEC5P89102 971 aa11.32□□□□□ -0.6
MSF1YPR047W RCR2Q03446 210 aaKnown RBP11.32□□□□□ -0.6
MSF1YPR047W CUR1Q06469 252 aa11.32□□□□□ -0.6
MSF1YPR047W SDH5Q08230 162 aa11.32□□□□□ -0.6
MSF1YPR047W SGO1Q08490 590 aa11.32□□□□□ -0.6
MSF1YPR047W HAP2P06774 265 aa11.31□□□□□ -0.6
MSF1YPR047W PRX1P34227 261 aaKnown RBP11.31□□□□□ -0.6
MSF1YPR047W MNN4P36044 1178 aa11.31□□□□□ -0.6
MSF1YPR047W SAF1P38352 637 aa11.31□□□□□ -0.6
MSF1YPR047W YML083CQ04526 418 aa11.31□□□□□ -0.6
MSF1YPR047W OSH2Q12451 1283 aa11.31□□□□□ -0.6
MSF1YPR047W PEX1P24004 1043 aa11.3□□□□□ -0.6
MSF1YPR047W PEX2P32800 271 aa11.3□□□□□ -0.6
MSF1YPR047W MNR2P35724 969 aa11.3□□□□□ -0.6
MSF1YPR047W MMS4P38257 691 aa11.3□□□□□ -0.6
MSF1YPR047W PEX28P38848 579 aa11.3□□□□□ -0.6
MSF1YPR047W ORC5P50874 479 aa11.3□□□□□ -0.6
MSF1YPR047W ART5P53244 586 aaKnown RBP11.3□□□□□ -0.6
MSF1YPR047W EEB1Q02891 456 aa11.3□□□□□ -0.6
MSF1YPR047W CWC21Q03375 135 aaKnown RBP11.3□□□□□ -0.6
MSF1YPR047W YDL057WQ07379 328 aa11.3□□□□□ -0.6
MSF1YPR047W SHS1Q07657 551 aa11.3□□□□□ -0.6
MSF1YPR047W PUS1Q12211 544 aaKnown RBP11.3□□□□□ -0.6
MSF1YPR047W TOR2P32600 2474 aaKnown RBP11.3□□□□□ -0.6
MSF1YPR047W CIT2P08679 460 aa11.29□□□□□ -0.6
MSF1YPR047W PCK1P10963 549 aa11.29□□□□□ -0.6
MSF1YPR047W IMG2P25642 146 aaPredicted RBP11.29□□□□□ -0.6
MSF1YPR047W PPS1P38148 807 aa11.29□□□□□ -0.6
MSF1YPR047W SCD6P45978 349 aaKnown RBP RIP-Chip data11.29□□□□□ -0.6 RIP-Chip
MSF1YPR047W PEX14P53112 341 aa11.29□□□□□ -0.6
MSF1YPR047W COG8Q04632 607 aa11.29□□□□□ -0.6
MSF1YPR047W PLP2Q12017 286 aa11.29□□□□□ -0.6
MSF1YPR047W APE1P14904 514 aa11.28□□□□□ -0.6
MSF1YPR047W REC8Q12188 680 aa11.28□□□□□ -0.6
MSF1YPR047W ATP1P07251 545 aaKnown RBP11.27□□□□□ -0.6
MSF1YPR047W RPL4AP10664 362 aaKnown RBP11.27□□□□□ -0.6
MSF1YPR047W TAF13P11747 167 aa11.27□□□□□ -0.6
MSF1YPR047W BET2P20133 325 aa11.27□□□□□ -0.6
MSF1YPR047W RDS1P25611 832 aa11.27□□□□□ -0.6
MSF1YPR047W RAD27P26793 382 aa11.27□□□□□ -0.6
MSF1YPR047W PRR1P28708 518 aa11.27□□□□□ -0.6
MSF1YPR047W CYS3P31373 394 aaKnown RBP11.27□□□□□ -0.6
MSF1YPR047W HMT1P38074 348 aa11.27□□□□□ -0.6
MSF1YPR047W VTC2P43585 828 aa11.27□□□□□ -0.6
MSF1YPR047W NPA3P47122 385 aa11.27□□□□□ -0.6
MSF1YPR047W RPL4BP49626 362 aaKnown RBP11.27□□□□□ -0.6
MSF1YPR047W NUT1P53114 1132 aa11.27□□□□□ -0.6
MSF1YPR047W HCR1Q05775 265 aaKnown RBP11.27□□□□□ -0.6
MSF1YPR047W RRD2Q12461 358 aa11.27□□□□□ -0.6
MSF1YPR047W VPH1P32563 840 aaKnown RBP11.26□□□□□ -0.61
MSF1YPR047W TRM2P33753 639 aa11.26□□□□□ -0.61
MSF1YPR047W PCM1P38628 557 aaKnown RBP11.26□□□□□ -0.61
MSF1YPR047W ULI1P43604 169 aa11.26□□□□□ -0.61
MSF1YPR047W ASN1P49089 572 aaKnown RBP11.26□□□□□ -0.61
MSF1YPR047W STB4P50104 949 aa11.26□□□□□ -0.61
MSF1YPR047W IRC10Q08118 586 aa11.26□□□□□ -0.61
MSF1YPR047W YPL277CQ08989 487 aa11.26□□□□□ -0.61
MSF1YPR047W LEO1P38439 464 aa11.26□□□□□ -0.61
MSF1YPR047W YFL034WP43564 1073 aa11.26□□□□□ -0.61
MSF1YPR047W CUE3P53137 624 aaKnown RBP11.26□□□□□ -0.61
MSF1YPR047W CDC53Q12018 815 aaKnown RBP11.26□□□□□ -0.61
MSF1YPR047W SPE1P08432 466 aa11.25□□□□□ -0.61
MSF1YPR047W MAS1P10507 462 aa11.25□□□□□ -0.61
MSF1YPR047W PHO8P11491 566 aa11.25□□□□□ -0.61
MSF1YPR047W YEL1P34225 687 aa11.25□□□□□ -0.61
MSF1YPR047W RIM4P38741 713 aa11.25□□□□□ -0.61
MSF1YPR047W SPC98P53540 846 aa11.25□□□□□ -0.61
MSF1YPR047W PSR2Q07949 397 aa11.25□□□□□ -0.61
MSF1YPR047W PGS1P25578 521 aa11.24□□□□□ -0.61
MSF1YPR047W UTP14Q04500 899 aaKnown RBP11.24□□□□□ -0.61
MSF1YPR047W CCH1P50077 2039 aa11.23□□□□□ -0.61
MSF1YPR047W KGD2P19262 463 aaPredicted RBP11.23□□□□□ -0.61
MSF1YPR047W BMH1P29311 267 aaKnown RBP11.23□□□□□ -0.61
MSF1YPR047W SNF7P39929 240 aaKnown RBP11.23□□□□□ -0.61
MSF1YPR047W SIP5P40210 489 aaKnown RBP11.23□□□□□ -0.61
MSF1YPR047W STP1Q00947 519 aa11.23□□□□□ -0.61
MSF1YPR047W YDR344CQ05510 147 aa11.23□□□□□ -0.61
MSF1YPR047W CTF3Q12748 733 aa11.23□□□□□ -0.61
MSF1YPR047W FAB1P34756 2278 aa11.22□□□□□ -0.61
MSF1YPR047W SSB1P11484 613 aaKnown RBP11.22□□□□□ -0.61
MSF1YPR047W HMG2P12684 1045 aa11.22□□□□□ -0.61
MSF1YPR047W DAL7P21826 554 aa11.22□□□□□ -0.61
MSF1YPR047W PUP3P25451 205 aaKnown RBP11.22□□□□□ -0.61
MSF1YPR047W YKL097CP34245 136 aa11.22□□□□□ -0.61
MSF1YPR047W SSB2P40150 613 aaKnown RBP11.22□□□□□ -0.61
MSF1YPR047W NBP1P52919 319 aaPredicted RBP11.22□□□□□ -0.61
MSF1YPR047W BIK1P11709 440 aa11.21□□□□□ -0.61
MSF1YPR047W MRF1P30775 413 aaPredicted RBP11.21□□□□□ -0.61
MSF1YPR047W HIR1P32479 840 aa11.21□□□□□ -0.61
MSF1YPR047W CCM1P48237 864 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms