RNA–Protein interactions for RNA: YPL208W

RKM1, Transcript of SET-domain lysine-N-methyltransferase, yeast

Gene RKM1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM1	YPL208W	SDP1	P40479	209 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	STU2	P46675	888 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	TIM44	Q01852	431 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	OMS1	Q06668	471 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	PPR1	P07272	904 aa	Predicted RBP	3.12	□□□□□ -1.91
RKM1	YPL208W	STE5	P32917	917 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	CCM1	P48237	864 aa	Predicted RBP	3.12	□□□□□ -1.91
RKM1	YPL208W	MUK1	Q02866	612 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	TDA5	Q06417	326 aa	Known RBP	3.12	□□□□□ -1.91
RKM1	YPL208W	SWM1	Q12379	170 aa		3.12	□□□□□ -1.91
RKM1	YPL208W	FBP1	P09201	348 aa		3.11	□□□□□ -1.91
RKM1	YPL208W	PRP9	P19736	530 aa	Known RBP	3.11	□□□□□ -1.91
RKM1	YPL208W	TYE7	P33122	291 aa	Predicted RBP	3.11	□□□□□ -1.91
RKM1	YPL208W	YBR184W	P38299	523 aa		3.11	□□□□□ -1.91
RKM1	YPL208W	SPF1	P39986	1215 aa	Known RBP	3.11	□□□□□ -1.91
RKM1	YPL208W	ERG5	P54781	538 aa		3.11	□□□□□ -1.91
RKM1	YPL208W	YKR011C	Q02209	353 aa		3.11	□□□□□ -1.91
RKM1	YPL208W	LCD1	Q04377	747 aa		3.11	□□□□□ -1.91
RKM1	YPL208W	RPS9A	O13516	197 aa	Known RBP	3.1	□□□□□ -1.91
RKM1	YPL208W	REC104	P33323	182 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	CTF13	P35203	478 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	YBR284W	P38150	797 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	TOK1	P40310	691 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	YPR071W	Q12346	211 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	HBS1	P32769	611 aa	Known RBP	3.1	□□□□□ -1.91
RKM1	YPL208W	CTF8	P38877	133 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	ALR2	P43553	858 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	HDA1	P53973	706 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	IRC10	Q08118	586 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	FRE5	Q08908	694 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	TRM11	Q12463	433 aa		3.1	□□□□□ -1.91
RKM1	YPL208W	MET3	P08536	511 aa		3.09	□□□□□ -1.91
RKM1	YPL208W	TUB3	P09734	445 aa	Known RBP	3.09	□□□□□ -1.91
RKM1	YPL208W	URA1	P28272	314 aa	Predicted RBP	3.09	□□□□□ -1.91
RKM1	YPL208W	CDC11	P32458	415 aa		3.09	□□□□□ -1.91
RKM1	YPL208W	QRI1	P43123	477 aa	Known RBP	3.09	□□□□□ -1.91
RKM1	YPL208W	PUS2	P53167	370 aa		3.09	□□□□□ -1.91
RKM1	YPL208W	GND2	P53319	492 aa		3.09	□□□□□ -1.91
RKM1	YPL208W	BUL2	Q03758	920 aa	Known RBP	3.09	□□□□□ -1.91
RKM1	YPL208W	DLT1	Q04216	342 aa		3.09	□□□□□ -1.91
RKM1	YPL208W	MTH1	P35198	433 aa		3.08	□□□□□ -1.92
RKM1	YPL208W	SPC42	P36094	363 aa		3.08	□□□□□ -1.92
RKM1	YPL208W	PPS1	P38148	807 aa		3.08	□□□□□ -1.92
RKM1	YPL208W	YHR078W	P38799	552 aa		3.08	□□□□□ -1.92
RKM1	YPL208W	ELO3	P40319	345 aa		3.08	□□□□□ -1.92
RKM1	YPL208W	PFD1	P46988	109 aa		3.08	□□□□□ -1.92
RKM1	YPL208W	CAF20	P12962	161 aa	Known RBP	3.07	□□□□□ -1.92
RKM1	YPL208W	RPP1	P38786	293 aa		3.07	□□□□□ -1.92
RKM1	YPL208W	FKH2	P41813	862 aa		3.07	□□□□□ -1.92
RKM1	YPL208W	VHR1	P40522	640 aa		3.07	□□□□□ -1.92
RKM1	YPL208W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
RKM1	YPL208W	SNU71	P53207	620 aa	Known RBP	3.07	□□□□□ -1.92
RKM1	YPL208W	UBX5	Q06682	500 aa		3.07	□□□□□ -1.92
RKM1	YPL208W	HBT1	Q07653	1046 aa	Known RBP	3.07	□□□□□ -1.92
RKM1	YPL208W	FMP25	Q08023	583 aa		3.07	□□□□□ -1.92
RKM1	YPL208W	WRS1	Q12109	432 aa	Known RBP	3.07	□□□□□ -1.92
RKM1	YPL208W	MPH2	P0CD99	609 aa		3.06	□□□□□ -1.92
RKM1	YPL208W	GRX1	P25373	110 aa	Known RBP	3.06	□□□□□ -1.92
RKM1	YPL208W	CYS3	P31373	394 aa	Known RBP	3.06	□□□□□ -1.92
RKM1	YPL208W	ATF1	P40353	525 aa		3.06	□□□□□ -1.92
RKM1	YPL208W	DAS1	P47005	663 aa		3.06	□□□□□ -1.92
RKM1	YPL208W	MUP1	P50276	574 aa		3.06	□□□□□ -1.92
RKM1	YPL208W	LGE1	Q02796	332 aa	Known RBP	3.06	□□□□□ -1.92
RKM1	YPL208W	EAF1	Q06337	982 aa		3.06	□□□□□ -1.92
RKM1	YPL208W	SPO75	Q07798	868 aa		3.06	□□□□□ -1.92
RKM1	YPL208W	PRP4	P20053	465 aa	Known RBP	3.05	□□□□□ -1.92
RKM1	YPL208W	SCT1	P32784	759 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	UTP8	P53276	713 aa	Known RBP	3.05	□□□□□ -1.92
RKM1	YPL208W	MRPS35	P53292	345 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	PKH1	Q03407	766 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	ADY4	Q05955	493 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	HAL9	Q12180	1030 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	HBN1	Q96VH4	193 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	MSD1	P15179	658 aa	Known RBP	3.05	□□□□□ -1.92
RKM1	YPL208W	ARE1	P25628	610 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	RPL8B	P29453	256 aa	Known RBP	3.05	□□□□□ -1.92
RKM1	YPL208W	PET10	P36139	283 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	YHL017W	P38745	532 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	PZF1	P39933	429 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	SDS3	P40505	327 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	ERP6	P53198	216 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	DUS1	P53759	423 aa	Known RBP	3.05	□□□□□ -1.92
RKM1	YPL208W	CRR1	Q05790	422 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	ENV7	Q12003	364 aa		3.05	□□□□□ -1.92
RKM1	YPL208W	NIT3	P49954	291 aa		3.04	□□□□□ -1.92
RKM1	YPL208W	NOG2	P53742	486 aa	Known RBP	3.04	□□□□□ -1.92
RKM1	YPL208W	NAN1	Q02931	896 aa	Known RBP	3.04	□□□□□ -1.92
RKM1	YPL208W	MRH1	Q12117	320 aa	Predicted RBP	3.04	□□□□□ -1.92
RKM1	YPL208W	YOR022C	Q12204	715 aa		3.04	□□□□□ -1.92
RKM1	YPL208W	DAL7	P21826	554 aa		3.03	□□□□□ -1.92
RKM1	YPL208W	NGG1	P32494	702 aa		3.03	□□□□□ -1.92
RKM1	YPL208W	CUE2	P36075	443 aa	Known RBP	3.03	□□□□□ -1.92
RKM1	YPL208W	SAK1	P38990	1142 aa		3.03	□□□□□ -1.92
RKM1	YPL208W	AMA1	P50082	593 aa		3.03	□□□□□ -1.92
RKM1	YPL208W	ASI2	P53895	289 aa		3.03	□□□□□ -1.92
RKM1	YPL208W	BDF2	Q07442	638 aa		3.03	□□□□□ -1.92
RKM1	YPL208W	PRC1	P00729	532 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	SSY5	P47002	699 aa		3.02	□□□□□ -1.93
RKM1	YPL208W	MUS81	Q04149	632 aa	Predicted RBP	3.02	□□□□□ -1.93
RKM1	YPL208W	SSF2	Q12153	453 aa	Predicted RBP	3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms