RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C FMS1P50264 508 aa7.95□□□□□ -1.14
RUP1YOR138C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
RUP1YOR138C SYH1Q02875 849 aaKnown RBP7.95□□□□□ -1.14
RUP1YOR138C RRG1Q12167 365 aaPredicted RBP7.95□□□□□ -1.14
RUP1YOR138C FLO11P08640 1367 aa7.94□□□□□ -1.14
RUP1YOR138C ADH4P10127 382 aa7.94□□□□□ -1.14
RUP1YOR138C SUP45P12385 437 aaKnown RBP7.94□□□□□ -1.14
RUP1YOR138C CHS2P14180 963 aa7.94□□□□□ -1.14
RUP1YOR138C YCR051WP25631 222 aa7.94□□□□□ -1.14
RUP1YOR138C BCH2P36122 765 aa7.94□□□□□ -1.14
RUP1YOR138C CST26P38226 397 aa7.94□□□□□ -1.14
RUP1YOR138C SEN54Q02825 467 aaPredicted RBP7.94□□□□□ -1.14
RUP1YOR138C OYE2Q03558 400 aaKnown RBP7.94□□□□□ -1.14
RUP1YOR138C TDA9Q04545 1251 aa7.94□□□□□ -1.14
RUP1YOR138C YDR278CQ05612 105 aa7.94□□□□□ -1.14
RUP1YOR138C FUS2Q05670 677 aa7.94□□□□□ -1.14
RUP1YOR138C TAF10Q12030 206 aa7.94□□□□□ -1.14
RUP1YOR138C KRS1P15180 591 aaKnown RBP7.93□□□□□ -1.14
RUP1YOR138C GPI10P30777 616 aa7.93□□□□□ -1.14
RUP1YOR138C PLC1P32383 869 aa7.93□□□□□ -1.14
RUP1YOR138C HEK2P38199 381 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
RUP1YOR138C SIC1P38634 284 aa7.93□□□□□ -1.14
RUP1YOR138C ILM1P47155 203 aa7.93□□□□□ -1.14
RUP1YOR138C YJR142WP47173 342 aa7.93□□□□□ -1.14
RUP1YOR138C VID30P53076 958 aa7.93□□□□□ -1.14
RUP1YOR138C GTR1Q00582 310 aa7.93□□□□□ -1.14
RUP1YOR138C YPL109CQ02981 657 aa7.93□□□□□ -1.14
RUP1YOR138C YMR187CQ03236 431 aa7.93□□□□□ -1.14
RUP1YOR138C NCA2Q12374 616 aa7.93□□□□□ -1.14
RUP1YOR138C GRX6Q12438 231 aa7.93□□□□□ -1.14
RUP1YOR138C SPO16P17122 198 aa7.93□□□□□ -1.14
RUP1YOR138C SRV2P17555 526 aaKnown RBP7.93□□□□□ -1.14
RUP1YOR138C RRN6P32786 894 aa7.93□□□□□ -1.14
RUP1YOR138C AFG2P32794 780 aa7.93□□□□□ -1.14
RUP1YOR138C EXO5P38289 585 aa7.93□□□□□ -1.14
RUP1YOR138C YMR1P47147 688 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
RUP1YOR138C ATG1P53104 897 aa7.93□□□□□ -1.14
RUP1YOR138C FAR8Q05040 523 aa7.93□□□□□ -1.14
RUP1YOR138C ADP1P25371 1049 aa7.92□□□□□ -1.14
RUP1YOR138C YME1P32795 747 aa7.92□□□□□ -1.14
RUP1YOR138C RAD5P32849 1169 aaPredicted RBP7.92□□□□□ -1.14
RUP1YOR138C RPC37P36121 282 aa7.92□□□□□ -1.14
RUP1YOR138C RPN3P40016 523 aaKnown RBP7.92□□□□□ -1.14
RUP1YOR138C RIO2P40160 425 aaKnown RBP7.92□□□□□ -1.14
RUP1YOR138C ORC4P54791 529 aa7.92□□□□□ -1.14
RUP1YOR138C LCB5Q06147 687 aaKnown RBP7.92□□□□□ -1.14
RUP1YOR138C NOB1Q08444 459 aaKnown RBP7.92□□□□□ -1.14
RUP1YOR138C MPC54Q08550 464 aa7.92□□□□□ -1.14
RUP1YOR138C ARP6Q12509 438 aa7.92□□□□□ -1.14
RUP1YOR138C SEC39Q12745 709 aa7.92□□□□□ -1.14
RUP1YOR138C TY4A-HQ6Q5P6 413 aa7.92□□□□□ -1.14
RUP1YOR138C TFC4P33339 1025 aa7.91□□□□□ -1.14
RUP1YOR138C VPS35P34110 944 aa7.91□□□□□ -1.14
RUP1YOR138C TRZ1P36159 838 aaPredicted RBP7.91□□□□□ -1.14
RUP1YOR138C PGM2P37012 569 aaKnown RBP7.91□□□□□ -1.14
RUP1YOR138C SPC72P39723 622 aa7.91□□□□□ -1.14
RUP1YOR138C VPS4P52917 437 aa7.91□□□□□ -1.14
RUP1YOR138C ESBP6P53918 673 aa7.91□□□□□ -1.14
RUP1YOR138C NCS2P53923 493 aaPredicted RBP7.91□□□□□ -1.14
RUP1YOR138C CMS1Q07897 291 aaKnown RBP7.91□□□□□ -1.14
RUP1YOR138C SRD1P09007 221 aa7.91□□□□□ -1.14
RUP1YOR138C PCK1P10963 549 aa7.91□□□□□ -1.14
RUP1YOR138C VAN1P23642 535 aa7.91□□□□□ -1.14
RUP1YOR138C ICL1P28240 557 aaPredicted RBP7.91□□□□□ -1.14
RUP1YOR138C RAD54P32863 898 aa7.91□□□□□ -1.14
RUP1YOR138C NCL1P38205 684 aaKnown RBP7.91□□□□□ -1.14
RUP1YOR138C TIF4631P39935 952 aaKnown RBP7.91□□□□□ -1.14
RUP1YOR138C ZIP2P53061 704 aa7.91□□□□□ -1.14
RUP1YOR138C ENV11P53246 860 aa7.91□□□□□ -1.14
RUP1YOR138C TIM8P57744 87 aa7.91□□□□□ -1.14
RUP1YOR138C TFB2Q02939 513 aa7.91□□□□□ -1.14
RUP1YOR138C YLR177WQ06251 628 aa7.91□□□□□ -1.14
RUP1YOR138C RIB2Q12362 591 aaKnown RBP7.91□□□□□ -1.14
RUP1YOR138C HIF1Q12373 385 aa7.91□□□□□ -1.14
RUP1YOR138C CDC33P07260 213 aaKnown RBP7.9□□□□□ -1.14
RUP1YOR138C PHO8P11491 566 aa7.9□□□□□ -1.14
RUP1YOR138C KIN1P13185 1064 aa7.9□□□□□ -1.14
RUP1YOR138C CLN3P13365 580 aa7.9□□□□□ -1.14
RUP1YOR138C PGM1P33401 570 aaKnown RBP7.9□□□□□ -1.14
RUP1YOR138C UBP13P38187 747 aa7.9□□□□□ -1.14
RUP1YOR138C VHC1P38329 1120 aa7.9□□□□□ -1.14
RUP1YOR138C TDA10P42938 290 aa7.9□□□□□ -1.14
RUP1YOR138C TMA22P47089 198 aaPredicted RBP7.9□□□□□ -1.14
RUP1YOR138C HUL5P53119 910 aa7.9□□□□□ -1.14
RUP1YOR138C SPC24Q04477 213 aa7.9□□□□□ -1.14
RUP1YOR138C SLX4Q12098 748 aa7.9□□□□□ -1.14
RUP1YOR138C PMA1P05030 918 aaKnown RBP7.9□□□□□ -1.15
RUP1YOR138C BAS1P22035 811 aa7.9□□□□□ -1.15
RUP1YOR138C DBF4P32325 704 aa7.9□□□□□ -1.15
RUP1YOR138C MSG5P38590 489 aa7.9□□□□□ -1.15
RUP1YOR138C LCB2P40970 561 aa7.9□□□□□ -1.15
RUP1YOR138C SUB1P54000 292 aaKnown RBP7.9□□□□□ -1.15
RUP1YOR138C CEF1Q03654 590 aaPredicted RBP7.9□□□□□ -1.15
RUP1YOR138C ALR1Q08269 859 aa7.9□□□□□ -1.15
RUP1YOR138C RKM4Q12504 494 aa7.9□□□□□ -1.15
RUP1YOR138C GSC2P40989 1895 aa7.9□□□□□ -1.15
RUP1YOR138C SNF1P06782 633 aaKnown RBP7.89□□□□□ -1.15
RUP1YOR138C CBF2P32504 956 aa7.89□□□□□ -1.15
RUP1YOR138C YKR023WP36119 530 aaKnown RBP7.89□□□□□ -1.15
RUP1YOR138C END3P39013 349 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms