RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C RAD53P22216 821 aa4.02□□□□□ -1.77
SHE4YOR035C URA1P28272 314 aaPredicted RBP4.02□□□□□ -1.77
SHE4YOR035C UBP5P39944 805 aa4.02□□□□□ -1.77
SHE4YOR035C GYP8P43570 497 aa4.02□□□□□ -1.77
SHE4YOR035C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SHE4YOR035C DAM1P53267 343 aa4.02□□□□□ -1.77
SHE4YOR035C MET6P05694 767 aaKnown RBP4.02□□□□□ -1.77
SHE4YOR035C RPD3P32561 433 aa4.02□□□□□ -1.77
SHE4YOR035C MET12P46151 657 aa4.02□□□□□ -1.77
SHE4YOR035C YGR283CP53336 341 aaPredicted RBP4.02□□□□□ -1.77
SHE4YOR035C WHI4Q07655 649 aaKnown RBP4.02□□□□□ -1.77
SHE4YOR035C HIS5P07172 385 aa4.01□□□□□ -1.77
SHE4YOR035C YIL108WP40483 696 aaKnown RBP4.01□□□□□ -1.77
SHE4YOR035C PUS2P53167 370 aa4.01□□□□□ -1.77
SHE4YOR035C DAL7P21826 554 aa4□□□□□ -1.77
SHE4YOR035C TYE7P33122 291 aaPredicted RBP4□□□□□ -1.77
SHE4YOR035C THI80P35202 319 aa4□□□□□ -1.77
SHE4YOR035C NOG2P53742 486 aaKnown RBP4□□□□□ -1.77
SHE4YOR035C YKR011CQ02209 353 aa4□□□□□ -1.77
SHE4YOR035C YDR514CQ04408 483 aa4□□□□□ -1.77
SHE4YOR035C POB3Q04636 552 aaKnown RBP4□□□□□ -1.77
SHE4YOR035C SSL1Q04673 461 aaPredicted RBP4□□□□□ -1.77
SHE4YOR035C YLR224WQ05947 369 aa4□□□□□ -1.77
SHE4YOR035C NOP12Q08208 459 aaKnown RBP4□□□□□ -1.77
SHE4YOR035C SPC29P33419 253 aa4□□□□□ -1.77
SHE4YOR035C ATG19P35193 415 aa4□□□□□ -1.77
SHE4YOR035C RRP14P36080 434 aaKnown RBP4□□□□□ -1.77
SHE4YOR035C ALG12P53730 551 aa4□□□□□ -1.77
SHE4YOR035C TMA10Q06177 86 aa4□□□□□ -1.77
SHE4YOR035C YLR358CO13565 187 aa3.99□□□□□ -1.77
SHE4YOR035C PRE10P21242 288 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
SHE4YOR035C NMD2P38798 1089 aaKnown RBP3.99□□□□□ -1.77
SHE4YOR035C TAD1P53065 400 aa3.99□□□□□ -1.77
SHE4YOR035C HDA1P53973 706 aa3.99□□□□□ -1.77
SHE4YOR035C REH1Q06709 432 aa3.99□□□□□ -1.77
SHE4YOR035C MET7Q08645 548 aa3.99□□□□□ -1.77
SHE4YOR035C SED4P25365 1065 aa3.99□□□□□ -1.77
SHE4YOR035C SAP190P36123 1033 aa3.99□□□□□ -1.77
SHE4YOR035C PLB1P39105 664 aa3.99□□□□□ -1.77
SHE4YOR035C DSS1P39112 969 aa3.99□□□□□ -1.77
SHE4YOR035C MSH2P25847 964 aa3.98□□□□□ -1.77
SHE4YOR035C CYS3P31373 394 aaKnown RBP3.98□□□□□ -1.77
SHE4YOR035C MAL11P53048 616 aa3.98□□□□□ -1.77
SHE4YOR035C GSY1P23337 708 aa3.98□□□□□ -1.77
SHE4YOR035C PER1P25625 357 aa3.98□□□□□ -1.77
SHE4YOR035C URM1P40554 99 aaPredicted RBP3.98□□□□□ -1.77
SHE4YOR035C CHA4P43634 648 aa3.98□□□□□ -1.77
SHE4YOR035C ATP25Q03153 612 aa3.98□□□□□ -1.77
SHE4YOR035C FLR1P38124 548 aa3.97□□□□□ -1.77
SHE4YOR035C CLU1Q03690 1277 aaKnown RBP3.97□□□□□ -1.77
SHE4YOR035C LRS4Q04087 347 aaKnown RBP3.97□□□□□ -1.77
SHE4YOR035C UPC2Q12151 913 aa3.97□□□□□ -1.77
SHE4YOR035C YOR022CQ12204 715 aa3.97□□□□□ -1.77
SHE4YOR035C NPC2Q12408 173 aa3.97□□□□□ -1.77
SHE4YOR035C AIM44Q99299 758 aa3.97□□□□□ -1.77
SHE4YOR035C PRC1P00729 532 aa3.97□□□□□ -1.77
SHE4YOR035C YCL002CP25565 263 aa3.97□□□□□ -1.77
SHE4YOR035C PEX6P33760 1030 aa3.96□□□□□ -1.78
SHE4YOR035C LST4P34239 828 aa3.96□□□□□ -1.78
SHE4YOR035C SHR5P41912 237 aa3.96□□□□□ -1.78
SHE4YOR035C MCM6P53091 1017 aaKnown RBP3.96□□□□□ -1.78
SHE4YOR035C RSC3Q06639 885 aa3.96□□□□□ -1.78
SHE4YOR035C ESC8Q08119 714 aa3.96□□□□□ -1.78
SHE4YOR035C NTG2Q08214 380 aa3.96□□□□□ -1.78
SHE4YOR035C KCS1Q12494 1050 aa3.96□□□□□ -1.78
SHE4YOR035C MPT5P39016 859 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SHE4YOR035C SDP1P40479 209 aa3.96□□□□□ -1.78
SHE4YOR035C ALY2P47029 1046 aa3.96□□□□□ -1.78
SHE4YOR035C NCS6P53088 359 aa3.96□□□□□ -1.78
SHE4YOR035C UGO1Q03327 502 aa3.96□□□□□ -1.78
SHE4YOR035C MDM12Q92328 271 aa3.96□□□□□ -1.78
SHE4YOR035C MEF1P25039 761 aa3.95□□□□□ -1.78
SHE4YOR035C VBA3P25594 458 aa3.95□□□□□ -1.78
SHE4YOR035C SET5P38890 526 aaKnown RBP3.95□□□□□ -1.78
SHE4YOR035C MNN10P50108 393 aaKnown RBP3.95□□□□□ -1.78
SHE4YOR035C DUS1P53759 423 aaKnown RBP3.95□□□□□ -1.78
SHE4YOR035C DIF1O13577 133 aa3.95□□□□□ -1.78
SHE4YOR035C CDC9P04819 755 aa3.95□□□□□ -1.78
SHE4YOR035C STE11P23561 717 aa3.95□□□□□ -1.78
SHE4YOR035C CAD1P24813 409 aaKnown RBP3.95□□□□□ -1.78
SHE4YOR035C YHR078WP38799 552 aa3.95□□□□□ -1.78
SHE4YOR035C CTF8P38877 133 aa3.95□□□□□ -1.78
SHE4YOR035C TY4A-JP47023 414 aa3.95□□□□□ -1.78
SHE4YOR035C HAL9Q12180 1030 aa3.95□□□□□ -1.78
SHE4YOR035C FBP1P09201 348 aa3.94□□□□□ -1.78
SHE4YOR035C STE14P32584 239 aa3.94□□□□□ -1.78
SHE4YOR035C STO1P34160 861 aaKnown RBP3.94□□□□□ -1.78
SHE4YOR035C MNN1P39106 762 aa3.94□□□□□ -1.78
SHE4YOR035C ZDS1P50111 915 aaKnown RBP3.94□□□□□ -1.78
SHE4YOR035C CTS1P29029 562 aa3.94□□□□□ -1.78
SHE4YOR035C MTC2P34246 357 aa3.94□□□□□ -1.78
SHE4YOR035C RLP7P40693 322 aaKnown RBP3.94□□□□□ -1.78
SHE4YOR035C YKL222CP35995 705 aa3.93□□□□□ -1.78
SHE4YOR035C SHM2P37291 469 aaKnown RBP3.93□□□□□ -1.78
SHE4YOR035C CRR1Q05790 422 aa3.93□□□□□ -1.78
SHE4YOR035C TAF1P46677 1066 aa3.92□□□□□ -1.78
SHE4YOR035C SWM1Q12379 170 aa3.92□□□□□ -1.78
SHE4YOR035C RAD18P10862 487 aa3.92□□□□□ -1.78
SHE4YOR035C KAR4P25583 335 aa3.92□□□□□ -1.78
SHE4YOR035C SEC21P32074 935 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms