RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W MRX3P38172 270 aa10.21□□□□□ -0.77
SMM1YNR015W VID24P38263 362 aa10.21□□□□□ -0.77
SMM1YNR015W UBX7P38349 436 aa10.21□□□□□ -0.77
SMM1YNR015W MSC7P38694 644 aa10.21□□□□□ -0.77
SMM1YNR015W YAP1801P38856 637 aa10.21□□□□□ -0.77
SMM1YNR015W CCM1P48237 864 aaPredicted RBP10.21□□□□□ -0.77
SMM1YNR015W GCV2P49095 1034 aa10.21□□□□□ -0.77
SMM1YNR015W EAF7P53911 425 aaKnown RBP10.21□□□□□ -0.77
SMM1YNR015W EAR1Q03212 550 aa10.21□□□□□ -0.77
SMM1YNR015W DOT1Q04089 582 aaKnown RBP10.21□□□□□ -0.77
SMM1YNR015W MED1Q12321 566 aa10.21□□□□□ -0.77
SMM1YNR015W PCD1Q12524 340 aa10.21□□□□□ -0.77
SMM1YNR015W OM45P16547 393 aa10.2□□□□□ -0.78
SMM1YNR015W PSO2P30620 661 aa10.2□□□□□ -0.78
SMM1YNR015W UBP5P39944 805 aa10.2□□□□□ -0.78
SMM1YNR015W LCB2P40970 561 aa10.2□□□□□ -0.78
SMM1YNR015W SHE10P53075 577 aa10.2□□□□□ -0.78
SMM1YNR015W MAG2Q06436 670 aaKnown RBP10.2□□□□□ -0.78
SMM1YNR015W ZPS1Q12512 249 aa10.2□□□□□ -0.78
SMM1YNR015W COX4P04037 155 aa10.19□□□□□ -0.78
SMM1YNR015W SCP160P06105 1222 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
SMM1YNR015W MAK16P10962 306 aaPredicted RBP10.19□□□□□ -0.78
SMM1YNR015W GLN3P18494 730 aa10.19□□□□□ -0.78
SMM1YNR015W YHL026CP38740 315 aa10.19□□□□□ -0.78
SMM1YNR015W JHD1P40034 492 aa10.19□□□□□ -0.78
SMM1YNR015W TOS3P43637 560 aa10.19□□□□□ -0.78
SMM1YNR015W AIP1P46680 615 aaKnown RBP10.19□□□□□ -0.78
SMM1YNR015W ORC5P50874 479 aa10.19□□□□□ -0.78
SMM1YNR015W YNL134CP53912 376 aaKnown RBP10.19□□□□□ -0.78
SMM1YNR015W TRS130Q03660 1102 aa10.19□□□□□ -0.78
SMM1YNR015W TOM70P07213 617 aaKnown RBP10.18□□□□□ -0.78
SMM1YNR015W TIF1P10081 395 aaKnown RBP10.18□□□□□ -0.78
SMM1YNR015W SKG6P32900 734 aaPredicted RBP10.18□□□□□ -0.78
SMM1YNR015W ADE17P38009 592 aaKnown RBP10.18□□□□□ -0.78
SMM1YNR015W LAM5P43560 674 aa10.18□□□□□ -0.78
SMM1YNR015W EBS1Q03466 884 aaKnown RBP10.18□□□□□ -0.78
SMM1YNR015W UTP14Q04500 899 aaKnown RBP10.18□□□□□ -0.78
SMM1YNR015W ADE4P04046 510 aaKnown RBP10.17□□□□□ -0.78
SMM1YNR015W ATE1P16639 503 aa10.17□□□□□ -0.78
SMM1YNR015W SLX1P38324 304 aa10.17□□□□□ -0.78
SMM1YNR015W AHC1Q12433 566 aa10.17□□□□□ -0.78
SMM1YNR015W MRC1P25588 1096 aa10.16□□□□□ -0.78
SMM1YNR015W MUD1P32605 298 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W RPT1P33299 467 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W MMS4P38257 691 aa10.16□□□□□ -0.78
SMM1YNR015W RSC8P43609 557 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W ISM1P48526 1002 aa10.16□□□□□ -0.78
SMM1YNR015W ASN1P49089 572 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W SKY1Q03656 742 aa10.16□□□□□ -0.78
SMM1YNR015W GFD1Q04839 188 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W HCR1Q05775 265 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W COG4Q06096 861 aa10.16□□□□□ -0.78
SMM1YNR015W RLP24Q07915 199 aaKnown RBP10.16□□□□□ -0.78
SMM1YNR015W UBR2Q07963 1872 aa10.15□□□□□ -0.78
SMM1YNR015W CDC37P06101 506 aaKnown RBP10.15□□□□□ -0.78
SMM1YNR015W PSY4P38193 441 aa10.15□□□□□ -0.78
SMM1YNR015W OPT1P40897 799 aa10.15□□□□□ -0.78
SMM1YNR015W SCD6P45978 349 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
SMM1YNR015W HSH155P49955 971 aaKnown RBP10.15□□□□□ -0.78
SMM1YNR015W SSL2Q00578 843 aa10.15□□□□□ -0.78
SMM1YNR015W DON1Q05610 365 aa10.15□□□□□ -0.78
SMM1YNR015W FAL1Q12099 399 aaKnown RBP10.15□□□□□ -0.78
SMM1YNR015W CHS2P14180 963 aa10.14□□□□□ -0.79
SMM1YNR015W KNS1P32350 737 aaPredicted RBP10.14□□□□□ -0.79
SMM1YNR015W NPP2P39997 493 aa10.14□□□□□ -0.79
SMM1YNR015W YER186CP40101 306 aa10.14□□□□□ -0.79
SMM1YNR015W ESL1P40456 1118 aa10.14□□□□□ -0.79
SMM1YNR015W ALT2P52892 507 aa10.14□□□□□ -0.79
SMM1YNR015W TIM8P57744 87 aa10.14□□□□□ -0.79
SMM1YNR015W YLR455WQ06188 304 aa10.14□□□□□ -0.79
SMM1YNR015W SHS1Q07657 551 aa10.14□□□□□ -0.79
SMM1YNR015W MLH2Q07980 695 aa10.14□□□□□ -0.79
SMM1YNR015W YAP7Q08182 245 aa10.14□□□□□ -0.79
SMM1YNR015W YOR022CQ12204 715 aa10.14□□□□□ -0.79
SMM1YNR015W VMA1P17255 1071 aaKnown RBP10.13□□□□□ -0.79
SMM1YNR015W RSA4P25382 515 aaKnown RBP10.13□□□□□ -0.79
SMM1YNR015W PRR1P28708 518 aa10.13□□□□□ -0.79
SMM1YNR015W PIN4P34217 668 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
SMM1YNR015W YET1P35723 206 aa10.13□□□□□ -0.79
SMM1YNR015W RKM3P38222 552 aa10.13□□□□□ -0.79
SMM1YNR015W ULI1P43604 169 aa10.13□□□□□ -0.79
SMM1YNR015W EMI2Q04409 500 aaKnown RBP10.13□□□□□ -0.79
SMM1YNR015W TMA16Q08687 178 aa10.13□□□□□ -0.79
SMM1YNR015W RPL4AP10664 362 aaKnown RBP10.12□□□□□ -0.79
SMM1YNR015W TAF13P11747 167 aa10.12□□□□□ -0.79
SMM1YNR015W MSD1P15179 658 aaKnown RBP10.12□□□□□ -0.79
SMM1YNR015W CSE2P33308 149 aa10.12□□□□□ -0.79
SMM1YNR015W BUD16P39988 312 aa10.12□□□□□ -0.79
SMM1YNR015W RPL4BP49626 362 aaKnown RBP10.12□□□□□ -0.79
SMM1YNR015W MCM6P53091 1017 aaKnown RBP10.12□□□□□ -0.79
SMM1YNR015W RSC1P53236 928 aa10.12□□□□□ -0.79
SMM1YNR015W YVH1Q02256 364 aaKnown RBP10.12□□□□□ -0.79
SMM1YNR015W WAR1Q03631 944 aa10.12□□□□□ -0.79
SMM1YNR015W GIR2Q03768 265 aaPredicted RBP10.12□□□□□ -0.79
SMM1YNR015W FIG4P42837 879 aa10.11□□□□□ -0.79
SMM1YNR015W YGR130CP53278 816 aa10.11□□□□□ -0.79
SMM1YNR015W ALG11P53954 548 aaKnown RBP10.11□□□□□ -0.79
SMM1YNR015W SGT2Q12118 346 aaKnown RBP10.11□□□□□ -0.79
SMM1YNR015W ASP3-2P0CX77 362 aa10.1□□□□□ -0.79
SMM1YNR015W ASP3-3P0CX78 362 aa10.1□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms