RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C YHL012WP38709 493 aa5.43□□□□□ -1.54
EAR1YMR171C RTA1P53047 317 aa5.43□□□□□ -1.54
EAR1YMR171C ACM1Q08981 209 aa5.43□□□□□ -1.54
EAR1YMR171C COQ4O13525 335 aa5.43□□□□□ -1.54
EAR1YMR171C LEU2P04173 364 aaPredicted RBP5.43□□□□□ -1.54
EAR1YMR171C ROX1P25042 368 aa5.43□□□□□ -1.54
EAR1YMR171C VPS24P36095 224 aaKnown RBP5.43□□□□□ -1.54
EAR1YMR171C CCC2P38995 1004 aa5.43□□□□□ -1.54
EAR1YMR171C GEM1P39722 662 aa5.43□□□□□ -1.54
EAR1YMR171C HEF3P53978 1044 aaKnown RBP5.43□□□□□ -1.54
EAR1YMR171C DUS3Q06053 668 aaKnown RBP5.43□□□□□ -1.54
EAR1YMR171C YOR059CQ08448 450 aaKnown RBP5.43□□□□□ -1.54
EAR1YMR171C HBN1Q96VH4 193 aa5.43□□□□□ -1.54
EAR1YMR171C PHO8P11491 566 aa5.42□□□□□ -1.54
EAR1YMR171C CHS2P14180 963 aa5.42□□□□□ -1.54
EAR1YMR171C SPC42P36094 363 aa5.42□□□□□ -1.54
EAR1YMR171C BET3P36149 193 aa5.42□□□□□ -1.54
EAR1YMR171C UGA2P38067 497 aa5.42□□□□□ -1.54
EAR1YMR171C RIA1P53893 1110 aa5.42□□□□□ -1.54
EAR1YMR171C DOS2P54858 310 aa5.42□□□□□ -1.54
EAR1YMR171C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
EAR1YMR171C ECM16Q04217 1267 aaKnown RBP5.42□□□□□ -1.54
EAR1YMR171C YLR125WQ12138 136 aa5.42□□□□□ -1.54
EAR1YMR171C PUS1Q12211 544 aaKnown RBP5.42□□□□□ -1.54
EAR1YMR171C YLR122CQ12312 125 aa5.42□□□□□ -1.54
EAR1YMR171C RPO41P13433 1351 aaKnown RBP5.41□□□□□ -1.54
EAR1YMR171C AAR2P32357 355 aaPredicted RBP5.41□□□□□ -1.54
EAR1YMR171C OYE3P41816 400 aaPredicted RBP5.41□□□□□ -1.54
EAR1YMR171C MAK10Q02197 733 aa5.41□□□□□ -1.54
EAR1YMR171C HIM1Q06674 414 aa5.41□□□□□ -1.54
EAR1YMR171C YDL124WQ07551 312 aaKnown RBP5.41□□□□□ -1.54
EAR1YMR171C AUS1Q08409 1394 aa5.41□□□□□ -1.54
EAR1YMR171C SRO9P25567 434 aaKnown RBP5.4□□□□□ -1.54
EAR1YMR171C PRO1P32264 428 aa5.4□□□□□ -1.54
EAR1YMR171C PPH3P32345 308 aa5.4□□□□□ -1.54
EAR1YMR171C YKL151CP36059 337 aa5.4□□□□□ -1.54
EAR1YMR171C YBR284WP38150 797 aa5.4□□□□□ -1.54
EAR1YMR171C TPO2P53283 614 aa5.4□□□□□ -1.54
EAR1YMR171C HRQ1Q05549 1077 aa5.4□□□□□ -1.54
EAR1YMR171C RTT109Q07794 436 aa5.4□□□□□ -1.54
EAR1YMR171C MET6P05694 767 aaKnown RBP5.4□□□□□ -1.55
EAR1YMR171C TOP3P13099 656 aa5.4□□□□□ -1.55
EAR1YMR171C MSB1P21339 1137 aaKnown RBP5.4□□□□□ -1.55
EAR1YMR171C CDC11P32458 415 aa5.4□□□□□ -1.55
EAR1YMR171C CDC12P32468 407 aaKnown RBP5.4□□□□□ -1.55
EAR1YMR171C MDL2P33311 773 aa5.4□□□□□ -1.55
EAR1YMR171C CCZ1P38273 704 aa5.4□□□□□ -1.55
EAR1YMR171C PIK1P39104 1066 aa5.4□□□□□ -1.55
EAR1YMR171C PEX7P39108 375 aa5.4□□□□□ -1.55
EAR1YMR171C KAE1P36132 386 aa5.39□□□□□ -1.55
EAR1YMR171C SIT1P39980 628 aa5.39□□□□□ -1.55
EAR1YMR171C SRP1Q02821 542 aaKnown RBP5.39□□□□□ -1.55
EAR1YMR171C TRE1Q08919 783 aa5.39□□□□□ -1.55
EAR1YMR171C LSP1Q12230 341 aaKnown RBP5.39□□□□□ -1.55
EAR1YMR171C TY4B-HP0C2J7 1802 aa5.39□□□□□ -1.55
EAR1YMR171C TY4B-JP47024 1803 aa5.39□□□□□ -1.55
EAR1YMR171C BI4P03879 638 aa5.38□□□□□ -1.55
EAR1YMR171C THI4P32318 326 aa5.38□□□□□ -1.55
EAR1YMR171C SAH1P39954 449 aaKnown RBP5.38□□□□□ -1.55
EAR1YMR171C DJP1P40564 432 aa5.38□□□□□ -1.55
EAR1YMR171C RSC58Q07979 502 aa5.38□□□□□ -1.55
EAR1YMR171C YPR071WQ12346 211 aa5.38□□□□□ -1.55
EAR1YMR171C YGR130CP53278 816 aa5.37□□□□□ -1.55
EAR1YMR171C NBA1Q08229 501 aaKnown RBP5.37□□□□□ -1.55
EAR1YMR171C EDE1P34216 1381 aa5.37□□□□□ -1.55
EAR1YMR171C YRF1-2P40105 1681 aa5.37□□□□□ -1.55
EAR1YMR171C RRP5Q05022 1729 aaKnown RBP5.37□□□□□ -1.55
EAR1YMR171C ADE8P04161 214 aa5.37□□□□□ -1.55
EAR1YMR171C THS1P04801 734 aaKnown RBP5.37□□□□□ -1.55
EAR1YMR171C MSD1P15179 658 aaKnown RBP5.37□□□□□ -1.55
EAR1YMR171C MSP1P28737 362 aa5.37□□□□□ -1.55
EAR1YMR171C AFR1P33304 620 aa5.37□□□□□ -1.55
EAR1YMR171C PET10P36139 283 aa5.37□□□□□ -1.55
EAR1YMR171C YRO2P38079 344 aa5.37□□□□□ -1.55
EAR1YMR171C PTC7P38797 343 aa5.37□□□□□ -1.55
EAR1YMR171C CCT8P47079 568 aaKnown RBP5.37□□□□□ -1.55
EAR1YMR171C BUL2Q03758 920 aaKnown RBP5.37□□□□□ -1.55
EAR1YMR171C RSB1Q08417 382 aa5.37□□□□□ -1.55
EAR1YMR171C FKS3Q04952 1785 aa5.36□□□□□ -1.55
EAR1YMR171C TOM70P07213 617 aaKnown RBP5.36□□□□□ -1.55
EAR1YMR171C GCD1P09032 578 aaPredicted RBP5.36□□□□□ -1.55
EAR1YMR171C AKL1P38080 1108 aaKnown RBP5.36□□□□□ -1.55
EAR1YMR171C ERT1P38140 529 aa5.36□□□□□ -1.55
EAR1YMR171C GTS1P40956 396 aa5.36□□□□□ -1.55
EAR1YMR171C UBP6P43593 499 aaKnown RBP5.36□□□□□ -1.55
EAR1YMR171C GYP7P48365 746 aa5.36□□□□□ -1.55
EAR1YMR171C MTC3P53077 123 aa5.36□□□□□ -1.55
EAR1YMR171C RAD50P12753 1312 aa5.35□□□□□ -1.55
EAR1YMR171C NPP1P25353 742 aa5.35□□□□□ -1.55
EAR1YMR171C MNN1P39106 762 aa5.35□□□□□ -1.55
EAR1YMR171C MAM1P40065 302 aa5.35□□□□□ -1.55
EAR1YMR171C TCB2P48231 1178 aa5.35□□□□□ -1.55
EAR1YMR171C SSY1Q03770 852 aa5.35□□□□□ -1.55
EAR1YMR171C MDM38Q08179 573 aa5.35□□□□□ -1.55
EAR1YMR171C YLL058WQ12198 575 aa5.35□□□□□ -1.55
EAR1YMR171C NSI1Q12457 570 aa5.35□□□□□ -1.55
EAR1YMR171C RPS24AP0CX31 135 aaKnown RBP5.34□□□□□ -1.55
EAR1YMR171C RPS24BP0CX32 135 aaKnown RBP5.34□□□□□ -1.55
EAR1YMR171C ACE2P21192 770 aa5.34□□□□□ -1.55
EAR1YMR171C AIM26P32858 118 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms