RNA–Protein interactions for RNA: YLL013C

PUF3, Transcript of Protein of the mitochondrial outer surface, yeast

Gene PUF3, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUF3	YLL013C	MMF1	P40185	145 aa	Known RBP	6.29	□□□□□ -1.4
PUF3	YLL013C	ORC5	P50874	479 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	PEX19	Q07418	342 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	DNL4	Q08387	944 aa	Predicted RBP	6.29	□□□□□ -1.4
PUF3	YLL013C	DAP1	Q12091	152 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	PKH2	Q12236	1081 aa	Known RBP	6.29	□□□□□ -1.4
PUF3	YLL013C	PHO8	P11491	566 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	HIR1	P32479	840 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	MNR2	P35724	969 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	APM2	P38700	605 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	TLG2	Q08144	397 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	OSH2	Q12451	1283 aa		6.29	□□□□□ -1.4
PUF3	YLL013C	DAL7	P21826	554 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	RDH54	P38086	958 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	RFT1	P38206	574 aa	Predicted RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	CCM1	P48237	864 aa	Predicted RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	SDH5	Q08230	162 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	PUS1	Q12211	544 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	RPL4A	P10664	362 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	MRF1	P30775	413 aa	Predicted RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	SAC6	P32599	642 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	YEL1	P34225	687 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	STB5	P38699	743 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	SNF7	P39929	240 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	YER186C	P40101	306 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	ASN1	P49089	572 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	RPL4B	P49626	362 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	SPP1	Q03012	353 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	UTP14	Q04500	899 aa	Known RBP	6.28	□□□□□ -1.4
PUF3	YLL013C	MNL2	Q12205	849 aa		6.28	□□□□□ -1.4
PUF3	YLL013C	CIT2	P08679	460 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	PRR1	P28708	518 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	TRM2	P33753	639 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	NBP1	P52919	319 aa	Predicted RBP	6.27	□□□□□ -1.41
PUF3	YLL013C	RCR2	Q03446	210 aa	Known RBP	6.27	□□□□□ -1.41
PUF3	YLL013C	YLR257W	Q06146	321 aa	Known RBP	6.27	□□□□□ -1.41
PUF3	YLL013C	PIG1	Q06216	648 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	MRI1	Q06489	411 aa	Known RBP	6.27	□□□□□ -1.41
PUF3	YLL013C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	RIP-Chip
PUF3	YLL013C	RAD54	P32863	898 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	GCS1	P35197	352 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	CCC2	P38995	1004 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	YIR016W	P40572	265 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	VID30	P53076	958 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	YGR130C	P53278	816 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	REC8	Q12188	680 aa		6.27	□□□□□ -1.41
PUF3	YLL013C	BIO2	P32451	375 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	BIM1	P40013	344 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	STB4	P50104	949 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	HST1	P53685	503 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
PUF3	YLL013C	EEB1	Q02891	456 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	YPL216W	Q08964	1102 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	CDC53	Q12018	815 aa	Known RBP	6.26	□□□□□ -1.41
PUF3	YLL013C	HAP2	P06774	265 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	VMA1	P17255	1071 aa	Known RBP	6.26	□□□□□ -1.41
PUF3	YLL013C	BDH2	P39713	417 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	YEL023C	P39992	682 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	HSH155	P49955	971 aa	Known RBP	6.26	□□□□□ -1.41
PUF3	YLL013C	YNR014W	P53719	212 aa		6.26	□□□□□ -1.41
PUF3	YLL013C	SSB1	P11484	613 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	COQ8	P27697	501 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	MUD1	P32605	298 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	YKT6	P36015	200 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	NPP2	P39997	493 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	SSB2	P40150	613 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	HUL4	P40985	892 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	ULI1	P43604	169 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	VMS1	Q04311	632 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	YML083C	Q04526	418 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	MED1	Q12321	566 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	TRK2	P28584	889 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	PEX2	P32800	271 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	YKL091C	P33324	310 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	PCM1	P38628	557 aa	Known RBP	6.25	□□□□□ -1.41
PUF3	YLL013C	MLH2	Q07980	695 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	TFC8	Q12308	588 aa		6.25	□□□□□ -1.41
PUF3	YLL013C	RPL22A	P05749	121 aa	Known RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	OM45	P16547	393 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
PUF3	YLL013C	CCT5	P40413	562 aa	Known RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	TOS3	P43637	560 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	TCO89	Q08921	799 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	PLP2	Q12017	286 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	SNF1	P06782	633 aa	Known RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	KGD2	P19262	463 aa	Predicted RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	PEX1	P24004	1043 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	CYS3	P31373	394 aa	Known RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	YER130C	P39959	443 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	HYR1	P40581	163 aa	Known RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	MAF1	P41910	395 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	NUT1	P53114	1132 aa		6.24	□□□□□ -1.41
PUF3	YLL013C	LSP1	Q12230	341 aa	Known RBP	6.24	□□□□□ -1.41
PUF3	YLL013C	LAA1	P39526	2014 aa		6.23	□□□□□ -1.41
PUF3	YLL013C	ATP1	P07251	545 aa	Known RBP	6.23	□□□□□ -1.41
PUF3	YLL013C	ASP3-2	P0CX77	362 aa		6.23	□□□□□ -1.41
PUF3	YLL013C	ASP3-3	P0CX78	362 aa		6.23	□□□□□ -1.41
PUF3	YLL013C	ASP3-4	P0CX79	362 aa		6.23	□□□□□ -1.41
PUF3	YLL013C	ASP3-1	P0CZ17	362 aa		6.23	□□□□□ -1.41
PUF3	YLL013C	MAS1	P10507	462 aa		6.23	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms