RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W YJR096WP47137 282 aa2.63□□□□□ -1.99
NUP100YKL068W RSM26P47141 266 aa2.63□□□□□ -1.99
NUP100YKL068W TAN1P53072 289 aaPredicted RBP2.63□□□□□ -1.99
NUP100YKL068W MEP3P53390 489 aa2.63□□□□□ -1.99
NUP100YKL068W GTR1Q00582 310 aa2.63□□□□□ -1.99
NUP100YKL068W PKH1Q03407 766 aa2.63□□□□□ -1.99
NUP100YKL068W VTI1Q04338 217 aa2.63□□□□□ -1.99
NUP100YKL068W CMR1Q12510 522 aaKnown RBP2.63□□□□□ -1.99
NUP100YKL068W COBP00163 385 aa2.62□□□□□ -1.99
NUP100YKL068W RPS31P05759 152 aaKnown RBP2.62□□□□□ -1.99
NUP100YKL068W MSN1P22148 382 aa2.62□□□□□ -1.99
NUP100YKL068W DPH2P32461 534 aa2.62□□□□□ -1.99
NUP100YKL068W LYP1P32487 611 aa2.62□□□□□ -1.99
NUP100YKL068W RKM3P38222 552 aa2.62□□□□□ -1.99
NUP100YKL068W APM2P38700 605 aa2.62□□□□□ -1.99
NUP100YKL068W CCT3P39077 534 aaKnown RBP2.62□□□□□ -1.99
NUP100YKL068W RGA1P39083 1007 aa2.62□□□□□ -1.99
NUP100YKL068W BTN2P53286 410 aa2.62□□□□□ -1.99
NUP100YKL068W PBP1P53297 722 aaKnown RBP2.62□□□□□ -1.99
NUP100YKL068W YNL165WP53891 406 aa2.62□□□□□ -1.99
NUP100YKL068W CTR9P89105 1077 aa2.62□□□□□ -1.99
NUP100YKL068W YMR018WQ04364 514 aa2.62□□□□□ -1.99
NUP100YKL068W YDR286CQ05530 114 aa2.62□□□□□ -1.99
NUP100YKL068W HDA2Q06629 674 aa2.62□□□□□ -1.99
NUP100YKL068W PFK1P16861 987 aaKnown RBP2.62□□□□□ -1.99
NUP100YKL068W PRP9P19736 530 aaKnown RBP2.62□□□□□ -1.99
NUP100YKL068W AEP2P22136 580 aa2.62□□□□□ -1.99
NUP100YKL068W SAN1P22470 610 aa2.62□□□□□ -1.99
NUP100YKL068W SQT1P35184 431 aa2.62□□□□□ -1.99
NUP100YKL068W RRN3P36070 627 aa2.62□□□□□ -1.99
NUP100YKL068W IRS4P36115 615 aaKnown RBP2.62□□□□□ -1.99
NUP100YKL068W ATP22P50273 684 aaPredicted RBP2.62□□□□□ -1.99
NUP100YKL068W TCB1Q12466 1186 aa2.62□□□□□ -1.99
NUP100YKL068W CDC9P04819 755 aa2.61□□□□□ -1.99
NUP100YKL068W INO1P11986 533 aa2.61□□□□□ -1.99
NUP100YKL068W RAD53P22216 821 aa2.61□□□□□ -1.99
NUP100YKL068W DUR3P33413 735 aa2.61□□□□□ -1.99
NUP100YKL068W STO1P34160 861 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W DRE2P36152 348 aa2.61□□□□□ -1.99
NUP100YKL068W YKR075CP36155 307 aa2.61□□□□□ -1.99
NUP100YKL068W UBS1P38290 277 aa2.61□□□□□ -1.99
NUP100YKL068W ACA1P39970 489 aa2.61□□□□□ -1.99
NUP100YKL068W UTP7P40055 554 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W NTA1P40354 457 aa2.61□□□□□ -1.99
NUP100YKL068W NIT2P47016 307 aa2.61□□□□□ -1.99
NUP100YKL068W VID30P53076 958 aa2.61□□□□□ -1.99
NUP100YKL068W YNR063WP53749 607 aa2.61□□□□□ -1.99
NUP100YKL068W GRX3Q03835 250 aa2.61□□□□□ -1.99
NUP100YKL068W SPN1Q06505 410 aaPredicted RBP2.61□□□□□ -1.99
NUP100YKL068W UTP4Q06679 776 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W YRF1-3P0CX14 1859 aa2.61□□□□□ -1.99
NUP100YKL068W YRF1-7P0CX15 1859 aa2.61□□□□□ -1.99
NUP100YKL068W YRF1-6P53819 1859 aa2.61□□□□□ -1.99
NUP100YKL068W PHR1P05066 565 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
NUP100YKL068W MSS18P08593 268 aa2.61□□□□□ -1.99
NUP100YKL068W SEC18P18759 758 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W GSY1P23337 708 aa2.61□□□□□ -1.99
NUP100YKL068W AAD3P25612 363 aa2.61□□□□□ -1.99
NUP100YKL068W CDC60P26637 1090 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W SAS3P34218 831 aa2.61□□□□□ -1.99
NUP100YKL068W PEX5P35056 612 aa2.61□□□□□ -1.99
NUP100YKL068W CAJ1P39101 391 aa2.61□□□□□ -1.99
NUP100YKL068W HXT13P39924 564 aa2.61□□□□□ -1.99
NUP100YKL068W GPD2P41911 440 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W HXT17P53631 564 aa2.61□□□□□ -1.99
NUP100YKL068W CAF120P53836 1060 aa2.61□□□□□ -1.99
NUP100YKL068W HXT15P54854 567 aa2.61□□□□□ -1.99
NUP100YKL068W PEX13P80667 386 aa2.61□□□□□ -1.99
NUP100YKL068W RCF1Q03713 159 aa2.61□□□□□ -1.99
NUP100YKL068W LCB5Q06147 687 aaKnown RBP2.61□□□□□ -1.99
NUP100YKL068W HIM1Q06674 414 aa2.61□□□□□ -1.99
NUP100YKL068W WTM2Q12206 467 aa2.61□□□□□ -1.99
NUP100YKL068W CLF1Q12309 687 aaPredicted RBP2.61□□□□□ -1.99
NUP100YKL068W SIR4P11978 1358 aa2.61□□□□□ -1.99
NUP100YKL068W SRD1P09007 221 aa2.6□□□□□ -1.99
NUP100YKL068W HEM13P11353 328 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W SPO16P17122 198 aa2.6□□□□□ -1.99
NUP100YKL068W SFL1P20134 766 aa2.6□□□□□ -1.99
NUP100YKL068W CHL1P22516 861 aaPredicted RBP2.6□□□□□ -1.99
NUP100YKL068W NAB2P32505 525 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
NUP100YKL068W HBS1P32769 611 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W SPC29P33419 253 aa2.6□□□□□ -1.99
NUP100YKL068W PXA2P34230 853 aa2.6□□□□□ -1.99
NUP100YKL068W YKL050CP35736 922 aa2.6□□□□□ -1.99
NUP100YKL068W MUD2P36084 527 aaKnown RBP2.6□□□□□ -1.99
NUP100YKL068W PEX28P38848 579 aa2.6□□□□□ -1.99
NUP100YKL068W SSN3P39073 555 aa2.6□□□□□ -1.99
NUP100YKL068W OAF1P39720 1047 aaPredicted RBP2.6□□□□□ -1.99
NUP100YKL068W QDR2P40474 542 aa2.6□□□□□ -1.99
NUP100YKL068W ROG3P43602 733 aa2.6□□□□□ -1.99
NUP100YKL068W CNN1P43618 361 aa2.6□□□□□ -1.99
NUP100YKL068W BFA1P47113 574 aa2.6□□□□□ -1.99
NUP100YKL068W NUT1P53114 1132 aa2.6□□□□□ -1.99
NUP100YKL068W PRP3Q03338 469 aaPredicted RBP2.6□□□□□ -1.99
NUP100YKL068W TRS130Q03660 1102 aa2.6□□□□□ -1.99
NUP100YKL068W ISA1Q07821 250 aaPredicted RBP2.6□□□□□ -1.99
NUP100YKL068W SDH5Q08230 162 aa2.6□□□□□ -1.99
NUP100YKL068W HSP42Q12329 375 aa2.6□□□□□ -1.99
NUP100YKL068W CSR2Q12734 1121 aa2.6□□□□□ -1.99
NUP100YKL068W TY3B-IQ7LHG5 1498 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms