RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	DAL7	P21826	554 aa		4.09	□□□□□ -1.75
NDC80	YIL144W	GSY1	P23337	708 aa		4.09	□□□□□ -1.75
NDC80	YIL144W	PCM1	P38628	557 aa	Known RBP	4.09	□□□□□ -1.75
NDC80	YIL144W	GPP1	P41277	250 aa	Known RBP	4.09	□□□□□ -1.75
NDC80	YIL144W	AIM14	P53109	570 aa		4.09	□□□□□ -1.75
NDC80	YIL144W	SSL1	Q04673	461 aa	Predicted RBP	4.09	□□□□□ -1.75
NDC80	YIL144W	YPR196W	Q06595	470 aa		4.09	□□□□□ -1.75
NDC80	YIL144W	NOT3	P06102	836 aa	Known RBP	4.09	□□□□□ -1.76
NDC80	YIL144W	MPH2	P0CD99	609 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	ADP1	P25371	1049 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	APL1	P27351	700 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	SIZ1	Q04195	904 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	CDA1	Q06702	301 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	YOL057W	Q08225	711 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	YBR182C-A	Q8TGU6	64 aa		4.09	□□□□□ -1.76
NDC80	YIL144W	URA1	P28272	314 aa	Predicted RBP	4.08	□□□□□ -1.76
NDC80	YIL144W	STE13	P33894	931 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	TYS1	P36421	394 aa	Known RBP	4.08	□□□□□ -1.76
NDC80	YIL144W	PAF1	P38351	445 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	PMT3	P47190	753 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	ORC3	P54790	616 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	MTQ2	Q03920	221 aa	Predicted RBP	4.08	□□□□□ -1.76
NDC80	YIL144W	YDR514C	Q04408	483 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	YDR338C	Q05497	695 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	ATG33	Q06485	197 aa		4.08	□□□□□ -1.76
NDC80	YIL144W	STO1	P34160	861 aa	Known RBP	4.07	□□□□□ -1.76
NDC80	YIL144W	MNN4	P36044	1178 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	ENP1	P38333	483 aa	Known RBP	4.07	□□□□□ -1.76
NDC80	YIL144W	CEP3	P40969	608 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	TMA17	Q12513	150 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	HOG1	P32485	435 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	SRP101	P32916	621 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	YEL1	P34225	687 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	YJR096W	P47137	282 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	CTH1	P47976	325 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	NIT3	P49954	291 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	ALO1	P54783	526 aa	Known RBP	4.07	□□□□□ -1.76
NDC80	YIL144W	SNP1	Q00916	300 aa	Predicted RBP	4.07	□□□□□ -1.76
NDC80	YIL144W	PLB2	Q03674	706 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	YDL177C	Q12257	170 aa		4.07	□□□□□ -1.76
NDC80	YIL144W	FBP1	P09201	348 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	HMG1	P12683	1054 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	YKR011C	Q02209	353 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	BRE1	Q07457	700 aa	Known RBP	4.06	□□□□□ -1.76
NDC80	YIL144W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
NDC80	YIL144W	HAL9	Q12180	1030 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	NUP145	P49687	1317 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	CYC1	P00044	109 aa	Predicted RBP	4.06	□□□□□ -1.76
NDC80	YIL144W	CYS3	P31373	394 aa	Known RBP	4.06	□□□□□ -1.76
NDC80	YIL144W	RPC82	P32349	654 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	RAI1	P53063	387 aa	Known RBP	4.06	□□□□□ -1.76
NDC80	YIL144W	YGR012W	P53206	393 aa		4.06	□□□□□ -1.76
NDC80	YIL144W	RFA1	P22336	621 aa	Known RBP	4.05	□□□□□ -1.76
NDC80	YIL144W	HSP78	P33416	811 aa		4.05	□□□□□ -1.76
NDC80	YIL144W	RLP7	P40693	322 aa	Known RBP	4.05	□□□□□ -1.76
NDC80	YIL144W	UBC9	P50623	157 aa	Predicted RBP	4.05	□□□□□ -1.76
NDC80	YIL144W	NOG2	P53742	486 aa	Known RBP	4.05	□□□□□ -1.76
NDC80	YIL144W	YDL121C	Q07541	149 aa		4.05	□□□□□ -1.76
NDC80	YIL144W	THI21	Q08975	551 aa		4.05	□□□□□ -1.76
NDC80	YIL144W	GAL10	P04397	699 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	CMP2	P14747	604 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	RPA135	P22138	1203 aa	Known RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	CCR4	P31384	837 aa	Known RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	EUG1	P32474	517 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	TYE7	P33122	291 aa	Predicted RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	ETP1	P38748	585 aa	Known RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	AIM21	P40563	679 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	YFR016C	P43597	1233 aa	Known RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	RSM24	Q03976	319 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	REH1	Q06709	432 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	WHI4	Q07655	649 aa	Known RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	GUP2	Q08929	609 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	YOR022C	Q12204	715 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	Q0142	Q9ZZW4	58 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	SCT1	P32784	759 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	OMA1	P36163	345 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	CKB2	P38930	258 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	ZRG8	P40021	1076 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	GCV2	P49095	1034 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	COG6	P53959	839 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	NHX1	Q04121	633 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	MED7	Q08278	222 aa		4.04	□□□□□ -1.76
NDC80	YIL144W	FAP7	Q12055	197 aa	Predicted RBP	4.04	□□□□□ -1.76
NDC80	YIL144W	KIN2	P13186	1147 aa	Known RBP	4.03	□□□□□ -1.76
NDC80	YIL144W	YKR051W	P36142	418 aa		4.03	□□□□□ -1.76
NDC80	YIL144W	TOS1	P38288	455 aa		4.03	□□□□□ -1.76
NDC80	YIL144W	MND2	P40577	368 aa		4.03	□□□□□ -1.76
NDC80	YIL144W	NOP2	P40991	618 aa	Known RBP	4.03	□□□□□ -1.76
NDC80	YIL144W	ALY2	P47029	1046 aa		4.03	□□□□□ -1.76
NDC80	YIL144W	GUD1	Q07729	489 aa		4.03	□□□□□ -1.76
NDC80	YIL144W	MRC1	P25588	1096 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	PRP19	P32523	503 aa	Known RBP	4.02	□□□□□ -1.77
NDC80	YIL144W	TOA1	P32773	286 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	YIL108W	P40483	696 aa	Known RBP	4.02	□□□□□ -1.77
NDC80	YIL144W	INP52	P50942	1183 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	PEX8	P53248	589 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	TGL2	P54857	326 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	GPR1	Q12361	961 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	YLR149C	Q99296	730 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	CDC6	P09119	513 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms