RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	NIP100	P33420	868 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	KTR2	P33550	425 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	PXL1	P36166	706 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	VFA1	P40080	203 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	SMC3	P47037	1230 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	JJJ3	P47138	172 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	HFM1	P51979	1187 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	ULP1	Q02724	621 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	UME1	Q03010	460 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	HMI1	Q12039	706 aa		10.86	□□□□□ -0.67
TIR3	YIL011W	RRP43	P25359	394 aa	Predicted RBP	10.85	□□□□□ -0.67
TIR3	YIL011W	DPH2	P32461	534 aa		10.85	□□□□□ -0.67
TIR3	YIL011W	YKL023W	P36103	277 aa	Known RBP	10.85	□□□□□ -0.67
TIR3	YIL011W	PRY3	P47033	881 aa		10.85	□□□□□ -0.67
TIR3	YIL011W	SHE10	P53075	577 aa		10.85	□□□□□ -0.67
TIR3	YIL011W	UTP14	Q04500	899 aa	Known RBP	10.85	□□□□□ -0.67
TIR3	YIL011W	YPR078C	Q06813	372 aa		10.85	□□□□□ -0.67
TIR3	YIL011W	CDC53	Q12018	815 aa	Known RBP	10.85	□□□□□ -0.67
TIR3	YIL011W	SMC1	P32908	1225 aa		10.84	□□□□□ -0.67
TIR3	YIL011W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.84	□□□□□ -0.67	not detected
TIR3	YIL011W	VID24	P38263	362 aa		10.84	□□□□□ -0.67
TIR3	YIL011W	SMC2	P38989	1170 aa	Known RBP	10.84	□□□□□ -0.67
TIR3	YIL011W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.84	□□□□□ -0.67	not detected
TIR3	YIL011W	HSH155	P49955	971 aa	Known RBP	10.84	□□□□□ -0.67
TIR3	YIL011W	VPS62	P53285	467 aa		10.84	□□□□□ -0.67
TIR3	YIL011W	YLR297W	Q05899	129 aa		10.84	□□□□□ -0.67
TIR3	YIL011W	MDM20	Q12387	796 aa	Known RBP	10.84	□□□□□ -0.67
TIR3	YIL011W	WHI2	P12611	486 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	MSS51	P32335	436 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	AFG3	P39925	761 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	NPP2	P39997	493 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	YAP5	P40574	245 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	FIG4	P42837	879 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	ORC5	P50874	479 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	VPS72	Q03388	795 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	VPS38	Q05919	439 aa		10.83	□□□□□ -0.68
TIR3	YIL011W	SPO12	P17123	173 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	TMT1	P32643	299 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	SKG6	P32900	734 aa	Predicted RBP	10.82	□□□□□ -0.68
TIR3	YIL011W	PCH2	P38126	564 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	ATG3	P40344	310 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	IES1	P43579	692 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	SAD1	P43589	448 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	ASN1	P49089	572 aa	Known RBP	10.82	□□□□□ -0.68
TIR3	YIL011W	ERG5	P54781	538 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	TRS130	Q03660	1102 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	UTP5	Q04177	643 aa	Known RBP	10.82	□□□□□ -0.68
TIR3	YIL011W	OPY2	Q06810	360 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	SLX4	Q12098	748 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	YOL098C	Q12496	1037 aa		10.82	□□□□□ -0.68
TIR3	YIL011W	PPR1	P07272	904 aa	Predicted RBP	10.81	□□□□□ -0.68
TIR3	YIL011W	MTF2	P10849	440 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	PDC6	P26263	563 aa	Known RBP	10.81	□□□□□ -0.68
TIR3	YIL011W	DUR3	P33413	735 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	SHQ1	P40486	507 aa	Predicted RBP	10.81	□□□□□ -0.68
TIR3	YIL011W	AIM21	P40563	679 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	STU2	P46675	888 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.81	□□□□□ -0.68	not detected
TIR3	YIL011W	ENV11	P53246	860 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	CTR9	P89105	1077 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	CUS1	Q02554	436 aa	Predicted RBP	10.81	□□□□□ -0.68
TIR3	YIL011W	CEF1	Q03654	590 aa	Predicted RBP	10.81	□□□□□ -0.68
TIR3	YIL011W	ECM7	Q06200	448 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	CSR1	Q06705	408 aa	Known RBP	10.81	□□□□□ -0.68
TIR3	YIL011W	SHS1	Q07657	551 aa		10.81	□□□□□ -0.68
TIR3	YIL011W	JNM1	P36224	373 aa		10.8	□□□□□ -0.68
TIR3	YIL011W	LDH1	P38139	375 aa		10.8	□□□□□ -0.68
TIR3	YIL011W	MMS4	P38257	691 aa		10.8	□□□□□ -0.68
TIR3	YIL011W	MNP1	P53163	194 aa	Predicted RBP	10.8	□□□□□ -0.68
TIR3	YIL011W	ALF1	P53904	254 aa		10.8	□□□□□ -0.68
TIR3	YIL011W	TBF1	Q02457	562 aa		10.8	□□□□□ -0.68
TIR3	YIL011W	NEW1	Q08972	1196 aa	Known RBP	10.8	□□□□□ -0.68
TIR3	YIL011W	CBF2	P32504	956 aa		10.79	□□□□□ -0.68
TIR3	YIL011W	UIP5	P36137	443 aa		10.79	□□□□□ -0.68
TIR3	YIL011W	KIC1	P38692	1080 aa		10.79	□□□□□ -0.68
TIR3	YIL011W	FTR1	P40088	404 aa		10.79	□□□□□ -0.68
TIR3	YIL011W	SDS3	P40505	327 aa		10.79	□□□□□ -0.68
TIR3	YIL011W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.79	□□□□□ -0.68	not detected
TIR3	YIL011W	RGA2	Q06407	1009 aa		10.79	□□□□□ -0.68
TIR3	YIL011W	TUP1	P16649	713 aa		10.78	□□□□□ -0.68
TIR3	YIL011W	SWI3	P32591	825 aa		10.78	□□□□□ -0.68
TIR3	YIL011W	CAJ1	P39101	391 aa		10.78	□□□□□ -0.68
TIR3	YIL011W	ALD5	P40047	520 aa	Known RBP	10.78	□□□□□ -0.68
TIR3	YIL011W	AZR1	P50080	613 aa		10.78	□□□□□ -0.68
TIR3	YIL011W	YML082W	Q04533	649 aa	Known RBP	10.78	□□□□□ -0.68
TIR3	YIL011W	TSR1	Q07381	788 aa	Known RBP	10.78	□□□□□ -0.68
TIR3	YIL011W	YDL206W	Q12424	762 aa		10.78	□□□□□ -0.68
TIR3	YIL011W	ZPS1	Q12512	249 aa		10.78	□□□□□ -0.68
TIR3	YIL011W	NAT1	P12945	854 aa	Known RBP	10.77	□□□□□ -0.69
TIR3	YIL011W	PET123	P17558	318 aa		10.77	□□□□□ -0.69
TIR3	YIL011W	MRX3	P38172	270 aa		10.77	□□□□□ -0.69
TIR3	YIL011W	INP51	P40559	946 aa	Known RBP	10.77	□□□□□ -0.69
TIR3	YIL011W	MMM1	P41800	426 aa		10.77	□□□□□ -0.69
TIR3	YIL011W	APT1	P49435	187 aa	Known RBP	10.77	□□□□□ -0.69
TIR3	YIL011W	RPA49	Q01080	415 aa	Predicted RBP	10.77	□□□□□ -0.69
TIR3	YIL011W	TOM70	P07213	617 aa	Known RBP	10.76	□□□□□ -0.69
TIR3	YIL011W	KIP1	P28742	1111 aa		10.76	□□□□□ -0.69
TIR3	YIL011W	RAD54	P32863	898 aa		10.76	□□□□□ -0.69
TIR3	YIL011W	TAD1	P53065	400 aa		10.76	□□□□□ -0.69
TIR3	YIL011W	ESBP6	P53918	673 aa		10.76	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 48 ms