RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	YLL058W	Q12198	575 aa		4.8	□□□□□ -1.64
YPT35	YHR105W	PER1	P25625	357 aa		4.79	□□□□□ -1.64
YPT35	YHR105W	MCD4	P36051	919 aa		4.79	□□□□□ -1.64
YPT35	YHR105W	YKR078W	P36158	585 aa	Known RBP	4.79	□□□□□ -1.64
YPT35	YHR105W	RFC5	P38251	354 aa		4.79	□□□□□ -1.64
YPT35	YHR105W	YER158C	P40095	573 aa		4.79	□□□□□ -1.64
YPT35	YHR105W	CCM1	P48237	864 aa	Predicted RBP	4.79	□□□□□ -1.64
YPT35	YHR105W	SRT1	Q03175	343 aa		4.79	□□□□□ -1.64
YPT35	YHR105W	MTQ2	Q03920	221 aa	Predicted RBP	4.79	□□□□□ -1.64
YPT35	YHR105W	CDA2	Q06703	312 aa		4.79	□□□□□ -1.64
YPT35	YHR105W	THS1	P04801	734 aa	Known RBP	4.78	□□□□□ -1.64
YPT35	YHR105W	SFL1	P20134	766 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	MIH1	P23748	554 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	TSA1	P34760	196 aa	Known RBP	4.78	□□□□□ -1.64
YPT35	YHR105W	NUG1	P40010	520 aa	Known RBP	4.78	□□□□□ -1.64
YPT35	YHR105W	TPM2	P40414	161 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	RRT14	P40470	206 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	HXT16	P47185	567 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	MRPL22	P53881	309 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	COG6	P53959	839 aa		4.78	□□□□□ -1.64
YPT35	YHR105W	TOP1	P04786	769 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	HMG1	P12683	1054 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	APL1	P27351	700 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	EUG1	P32474	517 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	GRX7	P38068	203 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	PCM1	P38628	557 aa	Known RBP	4.77	□□□□□ -1.65
YPT35	YHR105W	CAF16	P43569	289 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	YJR096W	P47137	282 aa		4.77	□□□□□ -1.65
YPT35	YHR105W	FAP7	Q12055	197 aa	Predicted RBP	4.77	□□□□□ -1.65
YPT35	YHR105W	CYC1	P00044	109 aa	Predicted RBP	4.76	□□□□□ -1.65
YPT35	YHR105W	CMP2	P14747	604 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	YCL002C	P25565	263 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	CDC48	P25694	835 aa	Known RBP	4.76	□□□□□ -1.65
YPT35	YHR105W	FUN30	P31380	1131 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	STO1	P34160	861 aa	Known RBP	4.76	□□□□□ -1.65
YPT35	YHR105W	YEL1	P34225	687 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	YBR071W	P38243	211 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	AIM14	P53109	570 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	DAM1	P53267	343 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	SNO2	P53823	222 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	TGL2	P54857	326 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	RSM24	Q03976	319 aa		4.76	□□□□□ -1.65
YPT35	YHR105W	GAL10	P04397	699 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	YAP1801	P38856	637 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	TAD1	P53065	400 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	ENV11	P53246	860 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	MSC2	Q03455	724 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	PLB2	Q03674	706 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	LRS4	Q04087	347 aa	Known RBP	4.75	□□□□□ -1.65
YPT35	YHR105W	ATG33	Q06485	197 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
YPT35	YHR105W	OSW2	Q12202	724 aa		4.75	□□□□□ -1.65
YPT35	YHR105W	MPH2	P0CD99	609 aa		4.74	□□□□□ -1.65
YPT35	YHR105W	KIN2	P13186	1147 aa	Known RBP	4.74	□□□□□ -1.65
YPT35	YHR105W	HOG1	P32485	435 aa		4.74	□□□□□ -1.65
YPT35	YHR105W	SEC6	P32844	805 aa		4.74	□□□□□ -1.65
YPT35	YHR105W	AIM3	P38266	947 aa	Known RBP	4.74	□□□□□ -1.65
YPT35	YHR105W	PMC1	P38929	1173 aa	Predicted RBP	4.74	□□□□□ -1.65
YPT35	YHR105W	SNP1	Q00916	300 aa	Predicted RBP	4.74	□□□□□ -1.65
YPT35	YHR105W	SIZ1	Q04195	904 aa		4.74	□□□□□ -1.65
YPT35	YHR105W	YDR338C	Q05497	695 aa		4.74	□□□□□ -1.65
YPT35	YHR105W	YOR352W	Q08816	343 aa		4.74	□□□□□ -1.65
YPT35	YHR105W	SGS1	P35187	1447 aa		4.73	□□□□□ -1.65
YPT35	YHR105W	PRP6	P19735	899 aa	Predicted RBP	4.73	□□□□□ -1.65
YPT35	YHR105W	ECM21	P38167	1117 aa	Known RBP	4.73	□□□□□ -1.65
YPT35	YHR105W	YNL034W	P53963	612 aa		4.73	□□□□□ -1.65
YPT35	YHR105W	HDA1	P53973	706 aa		4.73	□□□□□ -1.65
YPT35	YHR105W	YNL018C	P53976	612 aa		4.73	□□□□□ -1.65
YPT35	YHR105W	ROT1	Q03691	256 aa		4.73	□□□□□ -1.65
YPT35	YHR105W	YOR378W	Q08902	515 aa		4.73	□□□□□ -1.65
YPT35	YHR105W	DAL7	P21826	554 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	PLC1	P32383	869 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	PRP19	P32523	503 aa	Known RBP	4.72	□□□□□ -1.65
YPT35	YHR105W	SCT1	P32784	759 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	SND1	Q04007	877 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	YDR514C	Q04408	483 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	HFD1	Q04458	532 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	GUD1	Q07729	489 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	GUP2	Q08929	609 aa		4.72	□□□□□ -1.65
YPT35	YHR105W	URA1	P28272	314 aa	Predicted RBP	4.71	□□□□□ -1.66
YPT35	YHR105W	CCR4	P31384	837 aa	Known RBP	4.71	□□□□□ -1.66
YPT35	YHR105W	DAL3	P32459	195 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	SRP101	P32916	621 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	THI80	P35202	319 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	LAM1	P38851	1228 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	CKB2	P38930	258 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	OAF1	P39720	1047 aa	Predicted RBP	4.71	□□□□□ -1.66
YPT35	YHR105W	NIT3	P49954	291 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	UBC9	P50623	157 aa	Predicted RBP	4.71	□□□□□ -1.66
YPT35	YHR105W	RIM8	P53179	542 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	SGD1	Q06132	899 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	YPR196W	Q06595	470 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	REH1	Q06709	432 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	GIN4	Q12263	1142 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	YBR182C-A	Q8TGU6	64 aa		4.71	□□□□□ -1.66
YPT35	YHR105W	SOD2	P00447	233 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	RPS13	P05756	151 aa	Known RBP	4.7	□□□□□ -1.66
YPT35	YHR105W	NOT3	P06102	836 aa	Known RBP	4.7	□□□□□ -1.66
YPT35	YHR105W	PIF1	P07271	859 aa		4.7	□□□□□ -1.66
YPT35	YHR105W	SWE1	P32944	819 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms