RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	PSE1	P32337	1089 aa	Known RBP	6.27	□□□□□ -1.41
RSC30	YHR056C	VPS25	P47142	202 aa		6.27	□□□□□ -1.41
RSC30	YHR056C	ALG11	P53954	548 aa	Known RBP	6.27	□□□□□ -1.41
RSC30	YHR056C	SLG1	P54867	378 aa		6.27	□□□□□ -1.41
RSC30	YHR056C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	RIP-Chip
RSC30	YHR056C	PEP7	P32609	515 aa		6.27	□□□□□ -1.41
RSC30	YHR056C	YPT35	P38815	214 aa	Known RBP	6.27	□□□□□ -1.41
RSC30	YHR056C	DAN4	P47179	1161 aa		6.27	□□□□□ -1.41
RSC30	YHR056C	IES4	Q08561	116 aa		6.27	□□□□□ -1.41
RSC30	YHR056C	ISF1	P32488	338 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	CIC1	P38779	376 aa	Known RBP	6.26	□□□□□ -1.41
RSC30	YHR056C	YGR273C	P53329	174 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	RTT102	P53330	157 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	YHM2	Q04013	314 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	MTF1	P14908	341 aa	Known RBP	6.26	□□□□□ -1.41
RSC30	YHR056C	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
RSC30	YHR056C	RAD55	P38953	406 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	FYV8	P46949	817 aa	Known RBP	6.26	□□□□□ -1.41
RSC30	YHR056C	CAF130	P53280	1122 aa	Predicted RBP	6.26	□□□□□ -1.41
RSC30	YHR056C	UBP10	P53874	792 aa	Predicted RBP	6.26	□□□□□ -1.41
RSC30	YHR056C	CUR1	Q06469	252 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	APM4	Q99186	491 aa		6.26	□□□□□ -1.41
RSC30	YHR056C	BI4	P03879	638 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	COX4	P04037	155 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	GAL80	P04387	435 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	MET4	P32389	672 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	CDC27	P38042	758 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	YER158C	P40095	573 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
RSC30	YHR056C	YNL146W	P53906	100 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	AIM33	Q04516	312 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	SMD2	Q06217	110 aa	Known RBP	6.25	□□□□□ -1.41
RSC30	YHR056C	THR4	P16120	514 aa	Known RBP	6.25	□□□□□ -1.41
RSC30	YHR056C	GSY1	P23337	708 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	GPI10	P30777	616 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	PTC3	P34221	468 aa	Known RBP	6.25	□□□□□ -1.41
RSC30	YHR056C	BCH2	P36122	765 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	YBL036C	P38197	257 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	AKR1	P39010	764 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	SIP5	P40210	489 aa	Known RBP	6.25	□□□□□ -1.41
RSC30	YHR056C	NCS2	P53923	493 aa	Predicted RBP	6.25	□□□□□ -1.41
RSC30	YHR056C	TMN2	Q04562	672 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	YDL129W	Q07555	291 aa		6.25	□□□□□ -1.41
RSC30	YHR056C	NOC3	Q07896	663 aa	Predicted RBP	6.25	□□□□□ -1.41
RSC30	YHR056C	KDX1	P36005	433 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	PCI8	P40512	444 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	ALT1	P52893	592 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	LAA1	P39526	2014 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	ADE4	P04046	510 aa	Known RBP	6.24	□□□□□ -1.41
RSC30	YHR056C	RPC53	P25441	422 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	TRM2	P33753	639 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	MMS4	P38257	691 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	UBP5	P39944	805 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	BIM1	P40013	344 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	RPN3	P40016	523 aa	Known RBP	6.24	□□□□□ -1.41
RSC30	YHR056C	BRE2	P43132	505 aa		6.24	□□□□□ -1.41
RSC30	YHR056C	JIP5	Q06214	492 aa	Predicted RBP	6.24	□□□□□ -1.41
RSC30	YHR056C	LEA1	Q08963	238 aa	Predicted RBP	6.24	□□□□□ -1.41
RSC30	YHR056C	TOM70	P07213	617 aa	Known RBP	6.23	□□□□□ -1.41
RSC30	YHR056C	SUP45	P12385	437 aa	Known RBP	6.23	□□□□□ -1.41
RSC30	YHR056C	PDE1	P22434	369 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	STE11	P23561	717 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	MSH2	P25847	964 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	IES1	P43579	692 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	EEB1	Q02891	456 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	REC8	Q12188	680 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
RSC30	YHR056C	PDR3	P33200	976 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	DUG2	P38149	878 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	CCM1	P48237	864 aa	Predicted RBP	6.23	□□□□□ -1.41
RSC30	YHR056C	NUP84	P52891	726 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	STP1	Q00947	519 aa		6.23	□□□□□ -1.41
RSC30	YHR056C	DBP5	P20449	482 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	MNR2	P35724	969 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	YHR054C	P38780	354 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	DIP5	P53388	608 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	SPC98	P53540	846 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	HPF1	Q05164	967 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	TIP41	Q12199	356 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	CBP3	P21560	335 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	VPS3	P23643	1011 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	MCM3	P24279	971 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	SWI4	P25302	1093 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	SNF7	P39929	240 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	BTT1	P40314	149 aa	Predicted RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	CHS6	P40955	746 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	FAR11	P53917	953 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	CKA2	P19454	339 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	FPR1	P20081	114 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	TSA1	P34760	196 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	NUP82	P40368	713 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	CWC24	P53769	259 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	FMP25	Q08023	583 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	SLK19	Q08581	821 aa	Known RBP	6.22	□□□□□ -1.41
RSC30	YHR056C	TAF10	Q12030	206 aa		6.22	□□□□□ -1.41
RSC30	YHR056C	TEL1	P38110	2787 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	VID24	P38263	362 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	VTC2	P43585	828 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	POL31	P46957	487 aa		6.21	□□□□□ -1.42
RSC30	YHR056C	TIF35	Q04067	274 aa	Known RBP	6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms