RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W YSP2Q06681 1438 aa1.99□□□□□ -2.09
MDS3YGL197W PRP9P19736 530 aaKnown RBP1.99□□□□□ -2.09
MDS3YGL197W MRP8P35719 219 aa1.99□□□□□ -2.09
MDS3YGL197W UGA2P38067 497 aa1.99□□□□□ -2.09
MDS3YGL197W MET3P08536 511 aa1.98□□□□□ -2.09
MDS3YGL197W EFT1P32324 842 aaKnown RBP1.98□□□□□ -2.09
MDS3YGL197W YAP1802P53309 568 aa1.98□□□□□ -2.09
MDS3YGL197W RNT1Q02555 471 aa1.98□□□□□ -2.09
MDS3YGL197W MRL1Q06815 381 aa1.98□□□□□ -2.09
MDS3YGL197W CDC6P09119 513 aa1.98□□□□□ -2.09
MDS3YGL197W CDC43P18898 376 aa1.98□□□□□ -2.09
MDS3YGL197W PET112P33893 541 aa1.98□□□□□ -2.09
MDS3YGL197W GFA1P14742 717 aaKnown RBP1.98□□□□□ -2.09
MDS3YGL197W CDC11P32458 415 aa1.98□□□□□ -2.09
MDS3YGL197W PIC2P40035 300 aa1.98□□□□□ -2.09
MDS3YGL197W YGR012WP53206 393 aa1.98□□□□□ -2.09
MDS3YGL197W YNR063WP53749 607 aa1.98□□□□□ -2.09
MDS3YGL197W TRP4P07285 380 aaPredicted RBP1.97□□□□□ -2.09
MDS3YGL197W CDC34P14682 295 aa1.97□□□□□ -2.09
MDS3YGL197W AGP1P25376 633 aa1.97□□□□□ -2.09
MDS3YGL197W ROD1Q02805 837 aa1.97□□□□□ -2.09
MDS3YGL197W SSM4P40318 1319 aa1.97□□□□□ -2.09
MDS3YGL197W SRB8P25648 1427 aa1.97□□□□□ -2.09
MDS3YGL197W RPL11AP0C0W9 174 aaKnown RBP1.97□□□□□ -2.09
MDS3YGL197W HXT13P39924 564 aa1.97□□□□□ -2.09
MDS3YGL197W QRI1P43123 477 aaKnown RBP1.97□□□□□ -2.09
MDS3YGL197W AMA1P50082 593 aa1.97□□□□□ -2.09
MDS3YGL197W HXT17P53631 564 aa1.97□□□□□ -2.09
MDS3YGL197W HXT15P54854 567 aa1.97□□□□□ -2.09
MDS3YGL197W VPS16Q03308 798 aa1.97□□□□□ -2.09
MDS3YGL197W TRM11Q12463 433 aa1.97□□□□□ -2.09
MDS3YGL197W RPL11BQ3E757 174 aaPredicted RBP1.97□□□□□ -2.09
MDS3YGL197W SPP41P38904 1435 aa1.97□□□□□ -2.09
MDS3YGL197W TSC11P40061 1430 aa1.97□□□□□ -2.09
MDS3YGL197W HCA4P20448 770 aaKnown RBP1.97□□□□□ -2.09
MDS3YGL197W EMC1P25574 760 aa1.97□□□□□ -2.09
MDS3YGL197W NDJ1Q12366 352 aa1.97□□□□□ -2.09
MDS3YGL197W ADE8P04161 214 aa1.97□□□□□ -2.09
MDS3YGL197W DMC1P25453 334 aa1.97□□□□□ -2.09
MDS3YGL197W HRR25P29295 494 aaKnown RBP1.97□□□□□ -2.09
MDS3YGL197W LST4P34239 828 aa1.97□□□□□ -2.09
MDS3YGL197W YJL049WP47048 450 aa1.97□□□□□ -2.09
MDS3YGL197W TMA10Q06177 86 aa1.97□□□□□ -2.09
MDS3YGL197W ECM21P38167 1117 aaKnown RBP1.96□□□□□ -2.1
MDS3YGL197W RIA1P53893 1110 aa1.96□□□□□ -2.1
MDS3YGL197W MDM38Q08179 573 aa1.96□□□□□ -2.1
MDS3YGL197W MCH5Q08777 521 aa1.96□□□□□ -2.1
MDS3YGL197W FIG2P25653 1609 aa1.96□□□□□ -2.1
MDS3YGL197W SED4P25365 1065 aa1.96□□□□□ -2.1
MDS3YGL197W CDC48P25694 835 aaKnown RBP1.96□□□□□ -2.1
MDS3YGL197W YHL017WP38745 532 aa1.96□□□□□ -2.1
MDS3YGL197W ECM1P39715 212 aa1.96□□□□□ -2.1
MDS3YGL197W SIT1P39980 628 aa1.96□□□□□ -2.1
MDS3YGL197W POL32P47110 350 aa1.96□□□□□ -2.1
MDS3YGL197W SEN54Q02825 467 aaPredicted RBP1.96□□□□□ -2.1
MDS3YGL197W PPM2Q08282 695 aa1.96□□□□□ -2.1
MDS3YGL197W YER152CP10356 443 aa1.96□□□□□ -2.1
MDS3YGL197W SPC42P36094 363 aa1.96□□□□□ -2.1
MDS3YGL197W MCM7P38132 845 aa1.96□□□□□ -2.1
MDS3YGL197W SNM1P40993 198 aa1.96□□□□□ -2.1
MDS3YGL197W NOP7P53261 605 aaKnown RBP1.96□□□□□ -2.1
MDS3YGL197W CDA1Q06702 301 aa1.96□□□□□ -2.1
MDS3YGL197W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
MDS3YGL197W STH1P32597 1359 aa1.96□□□□□ -2.1
MDS3YGL197W MLS1P30952 554 aa1.95□□□□□ -2.1
MDS3YGL197W PLB1P39105 664 aa1.95□□□□□ -2.1
MDS3YGL197W TYW3P53177 273 aa1.95□□□□□ -2.1
MDS3YGL197W YAP6Q03935 383 aa1.95□□□□□ -2.1
MDS3YGL197W IRC10Q08118 586 aa1.95□□□□□ -2.1
MDS3YGL197W RPN13O13563 156 aa1.95□□□□□ -2.1
MDS3YGL197W PBY1P38254 753 aa1.95□□□□□ -2.1
MDS3YGL197W FAA3P39002 694 aa1.95□□□□□ -2.1
MDS3YGL197W GUS1P46655 708 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
MDS3YGL197W RAI1P53063 387 aaKnown RBP1.95□□□□□ -2.1
MDS3YGL197W RER2P35196 286 aa1.95□□□□□ -2.1
MDS3YGL197W MOH1P38191 138 aa1.95□□□□□ -2.1
MDS3YGL197W YER158CP40095 573 aa1.95□□□□□ -2.1
MDS3YGL197W HFM1P51979 1187 aa1.95□□□□□ -2.1
MDS3YGL197W TIF35Q04067 274 aaKnown RBP1.95□□□□□ -2.1
MDS3YGL197W BCK1Q01389 1478 aa1.95□□□□□ -2.1
MDS3YGL197W PPR1P07272 904 aaPredicted RBP1.95□□□□□ -2.1
MDS3YGL197W CDC12P32468 407 aaKnown RBP1.95□□□□□ -2.1
MDS3YGL197W GPB2P39717 880 aa1.95□□□□□ -2.1
MDS3YGL197W OSW7P43611 510 aa1.95□□□□□ -2.1
MDS3YGL197W DAM1P53267 343 aa1.95□□□□□ -2.1
MDS3YGL197W COQ11Q05892 277 aa1.95□□□□□ -2.1
MDS3YGL197W ENA1P13587 1091 aa1.94□□□□□ -2.1
MDS3YGL197W MSS4P38994 779 aa1.94□□□□□ -2.1
MDS3YGL197W NCS6P53088 359 aa1.94□□□□□ -2.1
MDS3YGL197W ENA2Q01896 1091 aa1.94□□□□□ -2.1
MDS3YGL197W SRT1Q03175 343 aa1.94□□□□□ -2.1
MDS3YGL197W ROT1Q03691 256 aa1.94□□□□□ -2.1
MDS3YGL197W DLT1Q04216 342 aa1.94□□□□□ -2.1
MDS3YGL197W BDF2Q07442 638 aa1.94□□□□□ -2.1
MDS3YGL197W NPC2Q12408 173 aa1.94□□□□□ -2.1
MDS3YGL197W ENA5Q12691 1091 aa1.94□□□□□ -2.1
MDS3YGL197W NIT3P49954 291 aa1.94□□□□□ -2.1
MDS3YGL197W RCL1Q08096 367 aaPredicted RBP1.94□□□□□ -2.1
MDS3YGL197W BI4P03879 638 aa1.94□□□□□ -2.1
MDS3YGL197W CUE2P36075 443 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms