RNA–Protein interactions for RNA: YDR188W

CCT6, Transcript of Subunit of the cytosolic chaperonin Cct ring complex, yeast

Gene CCT6, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCT6	YDR188W	YKL023W	P36103	277 aa	Known RBP	13.59	□□□□□ -0.23
CCT6	YDR188W	SMC2	P38989	1170 aa	Known RBP	13.59	□□□□□ -0.23
CCT6	YDR188W	YJR107W	P47145	328 aa		13.59	□□□□□ -0.23
CCT6	YDR188W	ERG5	P54781	538 aa		13.59	□□□□□ -0.23
CCT6	YDR188W	UTP5	Q04177	643 aa	Known RBP	13.59	□□□□□ -0.23
CCT6	YDR188W	YLR297W	Q05899	129 aa		13.59	□□□□□ -0.23
CCT6	YDR188W	FIG4	P42837	879 aa		13.58	□□□□□ -0.24
CCT6	YDR188W	SKP2	P42843	763 aa		13.58	□□□□□ -0.24
CCT6	YDR188W	IES1	P43579	692 aa		13.58	□□□□□ -0.24
CCT6	YDR188W	YDR090C	Q03193	310 aa		13.58	□□□□□ -0.24
CCT6	YDR188W	MSC2	Q03455	724 aa		13.58	□□□□□ -0.24
CCT6	YDR188W	CDC53	Q12018	815 aa	Known RBP	13.58	□□□□□ -0.24
CCT6	YDR188W	MTF2	P10849	440 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	SNA3	P14359	133 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	PDC6	P26263	563 aa	Known RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	SMC1	P32908	1225 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	SHQ1	P40486	507 aa	Predicted RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	CUL3	P53202	744 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	ALF1	P53904	254 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	YML020W	Q03722	664 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	UTP14	Q04500	899 aa	Known RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	HFI1	Q12060	488 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	YOR131C	Q12486	218 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	ATG11	Q12527	1178 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	PPR1	P07272	904 aa	Predicted RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	VMA1	P17255	1071 aa	Known RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	HSH155	P49955	971 aa	Known RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	SHE10	P53075	577 aa		13.57	□□□□□ -0.24
CCT6	YDR188W	DAK1	P54838	584 aa	Known RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	NEW1	Q08972	1196 aa	Known RBP	13.57	□□□□□ -0.24
CCT6	YDR188W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.56	□□□□□ -0.24	not detected
CCT6	YDR188W	CSR1	Q06705	408 aa	Known RBP	13.56	□□□□□ -0.24
CCT6	YDR188W	OPY2	Q06810	360 aa		13.56	□□□□□ -0.24
CCT6	YDR188W	SUT2	Q12286	268 aa		13.56	□□□□□ -0.24
CCT6	YDR188W	DPH2	P32461	534 aa		13.55	□□□□□ -0.24
CCT6	YDR188W	BCS1	P32839	456 aa		13.55	□□□□□ -0.24
CCT6	YDR188W	CAJ1	P39101	391 aa		13.55	□□□□□ -0.24
CCT6	YDR188W	NPP2	P39997	493 aa		13.55	□□□□□ -0.24
CCT6	YDR188W	ORC5	P50874	479 aa		13.55	□□□□□ -0.24
CCT6	YDR188W	SLX4	Q12098	748 aa		13.55	□□□□□ -0.24
CCT6	YDR188W	TUP1	P16649	713 aa		13.54	□□□□□ -0.24
CCT6	YDR188W	AFT1	P22149	690 aa		13.54	□□□□□ -0.24
CCT6	YDR188W	VID24	P38263	362 aa		13.54	□□□□□ -0.24
CCT6	YDR188W	SDS3	P40505	327 aa		13.54	□□□□□ -0.24
CCT6	YDR188W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	13.54	□□□□□ -0.24	RIP-Chip
CCT6	YDR188W	JJJ3	P47138	172 aa		13.54	□□□□□ -0.24
CCT6	YDR188W	RTP1	Q12751	981 aa		13.54	□□□□□ -0.24
CCT6	YDR188W	PET123	P17558	318 aa		13.53	□□□□□ -0.24
CCT6	YDR188W	JNM1	P36224	373 aa		13.53	□□□□□ -0.24
CCT6	YDR188W	ASN1	P49089	572 aa	Known RBP	13.53	□□□□□ -0.24
CCT6	YDR188W	APT1	P49435	187 aa	Known RBP	13.53	□□□□□ -0.24
CCT6	YDR188W	TMT1	P32643	299 aa		13.53	□□□□□ -0.24
CCT6	YDR188W	STO1	P34160	861 aa	Known RBP	13.53	□□□□□ -0.24
CCT6	YDR188W	TAD1	P53065	400 aa		13.53	□□□□□ -0.24
CCT6	YDR188W	ENV11	P53246	860 aa		13.53	□□□□□ -0.24
CCT6	YDR188W	TOM70	P07213	617 aa	Known RBP	13.52	□□□□□ -0.25
CCT6	YDR188W	WHI2	P12611	486 aa		13.52	□□□□□ -0.25
CCT6	YDR188W	SEC23	P15303	768 aa	Known RBP	13.52	□□□□□ -0.25
CCT6	YDR188W	SEC9	P40357	651 aa		13.52	□□□□□ -0.25
CCT6	YDR188W	SAD1	P43589	448 aa		13.52	□□□□□ -0.25
CCT6	YDR188W	PRY3	P47033	881 aa		13.52	□□□□□ -0.25
CCT6	YDR188W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.52	□□□□□ -0.25	RIP-Chip
CCT6	YDR188W	CEF1	Q03654	590 aa	Predicted RBP	13.52	□□□□□ -0.25
CCT6	YDR188W	MAM3	Q12296	706 aa		13.52	□□□□□ -0.25
CCT6	YDR188W	MSS51	P32335	436 aa		13.51	□□□□□ -0.25
CCT6	YDR188W	SKG6	P32900	734 aa	Predicted RBP	13.51	□□□□□ -0.25
CCT6	YDR188W	MMM1	P41800	426 aa		13.51	□□□□□ -0.25
CCT6	YDR188W	TRS130	Q03660	1102 aa		13.51	□□□□□ -0.25
CCT6	YDR188W	ECM7	Q06200	448 aa		13.51	□□□□□ -0.25
CCT6	YDR188W	SHS1	Q07657	551 aa		13.51	□□□□□ -0.25
CCT6	YDR188W	CBF2	P32504	956 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	KIC1	P38692	1080 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	MNP1	P53163	194 aa	Predicted RBP	13.5	□□□□□ -0.25
CCT6	YDR188W	TBF1	Q02457	562 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	ULP1	Q02724	621 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	YML082W	Q04533	649 aa	Known RBP	13.5	□□□□□ -0.25
CCT6	YDR188W	TSR1	Q07381	788 aa	Known RBP	13.5	□□□□□ -0.25
CCT6	YDR188W	KIP1	P28742	1111 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	PAH1	P32567	862 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	RAD54	P32863	898 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	RRD1	P40454	393 aa	Known RBP	13.5	□□□□□ -0.25
CCT6	YDR188W	ESBP6	P53918	673 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	VPS72	Q03388	795 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	RGA2	Q06407	1009 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	YDL206W	Q12424	762 aa		13.5	□□□□□ -0.25
CCT6	YDR188W	SWI3	P32591	825 aa		13.49	□□□□□ -0.25
CCT6	YDR188W	MMS4	P38257	691 aa		13.49	□□□□□ -0.25
CCT6	YDR188W	MCX1	P38323	520 aa	Predicted RBP	13.49	□□□□□ -0.25
CCT6	YDR188W	FTR1	P40088	404 aa		13.49	□□□□□ -0.25
CCT6	YDR188W	AFG3	P39925	761 aa		13.48	□□□□□ -0.25
CCT6	YDR188W	RPA49	Q01080	415 aa	Predicted RBP	13.48	□□□□□ -0.25
CCT6	YDR188W	CUS1	Q02554	436 aa	Predicted RBP	13.48	□□□□□ -0.25
CCT6	YDR188W	MDM20	Q12387	796 aa	Known RBP	13.48	□□□□□ -0.25
CCT6	YDR188W	NAT1	P12945	854 aa	Known RBP	13.47	□□□□□ -0.25
CCT6	YDR188W	RAD57	P25301	460 aa		13.47	□□□□□ -0.25
CCT6	YDR188W	YMR124W	P39523	943 aa	Known RBP	13.47	□□□□□ -0.25
CCT6	YDR188W	HXT8	P40886	569 aa		13.47	□□□□□ -0.25
CCT6	YDR188W	VPS62	P53285	467 aa		13.47	□□□□□ -0.25
CCT6	YDR188W	IWR1	Q07532	353 aa	Predicted RBP	13.47	□□□□□ -0.25
CCT6	YDR188W	ZPS1	Q12512	249 aa		13.47	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms