RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C HIS5P07172 385 aa2.48□□□□□ -2.01
SWI5YDR146C EMC1P25574 760 aa2.48□□□□□ -2.01
SWI5YDR146C ATG19P35193 415 aa2.48□□□□□ -2.01
SWI5YDR146C POA1P38218 177 aa2.48□□□□□ -2.01
SWI5YDR146C GCV2P49095 1034 aa2.48□□□□□ -2.01
SWI5YDR146C NCS6P53088 359 aa2.48□□□□□ -2.01
SWI5YDR146C PBP1P53297 722 aaKnown RBP2.48□□□□□ -2.01
SWI5YDR146C YKR011CQ02209 353 aa2.48□□□□□ -2.01
SWI5YDR146C UGO1Q03327 502 aa2.48□□□□□ -2.01
SWI5YDR146C ACK1Q07622 623 aaPredicted RBP2.48□□□□□ -2.01
SWI5YDR146C NTG2Q08214 380 aa2.48□□□□□ -2.01
SWI5YDR146C ENA1P13587 1091 aa2.47□□□□□ -2.01
SWI5YDR146C THI4P32318 326 aa2.47□□□□□ -2.01
SWI5YDR146C RPD3P32561 433 aa2.47□□□□□ -2.01
SWI5YDR146C MTC2P34246 357 aa2.47□□□□□ -2.01
SWI5YDR146C CTF8P38877 133 aa2.47□□□□□ -2.01
SWI5YDR146C GTF1P53260 183 aaPredicted RBP2.47□□□□□ -2.01
SWI5YDR146C DAM1P53267 343 aa2.47□□□□□ -2.01
SWI5YDR146C ENA2Q01896 1091 aa2.47□□□□□ -2.01
SWI5YDR146C SLU7Q02775 382 aaKnown RBP2.47□□□□□ -2.01
SWI5YDR146C SSL1Q04673 461 aaPredicted RBP2.47□□□□□ -2.01
SWI5YDR146C RXT3Q07458 294 aa2.47□□□□□ -2.01
SWI5YDR146C WHI4Q07655 649 aaKnown RBP2.47□□□□□ -2.01
SWI5YDR146C THI21Q08975 551 aa2.47□□□□□ -2.01
SWI5YDR146C UPC2Q12151 913 aa2.47□□□□□ -2.01
SWI5YDR146C ENA5Q12691 1091 aa2.47□□□□□ -2.01
SWI5YDR146C RAD53P22216 821 aa2.47□□□□□ -2.01
SWI5YDR146C TYE7P33122 291 aaPredicted RBP2.47□□□□□ -2.01
SWI5YDR146C LST4P34239 828 aa2.47□□□□□ -2.01
SWI5YDR146C TAD1P53065 400 aa2.47□□□□□ -2.01
SWI5YDR146C POB3Q04636 552 aaKnown RBP2.47□□□□□ -2.01
SWI5YDR146C YLR224WQ05947 369 aa2.47□□□□□ -2.01
SWI5YDR146C RSC3Q06639 885 aa2.47□□□□□ -2.01
SWI5YDR146C YLR001CQ07895 862 aa2.47□□□□□ -2.01
SWI5YDR146C MET7Q08645 548 aa2.47□□□□□ -2.01
SWI5YDR146C KCS1Q12494 1050 aa2.47□□□□□ -2.01
SWI5YDR146C PHR1P05066 565 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SWI5YDR146C MET6P05694 767 aaKnown RBP2.46□□□□□ -2.02
SWI5YDR146C TOD6P34219 525 aa2.46□□□□□ -2.02
SWI5YDR146C MCD4P36051 919 aa2.46□□□□□ -2.02
SWI5YDR146C SPC42P36094 363 aa2.46□□□□□ -2.02
SWI5YDR146C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SWI5YDR146C NIT3P49954 291 aa2.46□□□□□ -2.02
SWI5YDR146C PSP2P50109 593 aaKnown RBP2.46□□□□□ -2.02
SWI5YDR146C SPT20P50875 604 aa2.46□□□□□ -2.02
SWI5YDR146C NOG2P53742 486 aaKnown RBP2.46□□□□□ -2.02
SWI5YDR146C LRS4Q04087 347 aaKnown RBP2.46□□□□□ -2.02
SWI5YDR146C YDR338CQ05497 695 aa2.46□□□□□ -2.02
SWI5YDR146C REH1Q06709 432 aa2.46□□□□□ -2.02
SWI5YDR146C GPR1Q12361 961 aa2.46□□□□□ -2.02
SWI5YDR146C YBR182C-AQ8TGU6 64 aa2.46□□□□□ -2.02
SWI5YDR146C CDC9P04819 755 aa2.45□□□□□ -2.02
SWI5YDR146C RPP2AP05319 106 aaKnown RBP2.45□□□□□ -2.02
SWI5YDR146C DAL7P21826 554 aa2.45□□□□□ -2.02
SWI5YDR146C RFA1P22336 621 aaKnown RBP2.45□□□□□ -2.02
SWI5YDR146C STE11P23561 717 aa2.45□□□□□ -2.02
SWI5YDR146C MIH1P23748 554 aa2.45□□□□□ -2.02
SWI5YDR146C YCL002CP25565 263 aa2.45□□□□□ -2.02
SWI5YDR146C PPG1P32838 368 aa2.45□□□□□ -2.02
SWI5YDR146C PEX6P33760 1030 aa2.45□□□□□ -2.02
SWI5YDR146C FLR1P38124 548 aa2.45□□□□□ -2.02
SWI5YDR146C SDP1P40479 209 aa2.45□□□□□ -2.02
SWI5YDR146C EXG2P52911 562 aa2.45□□□□□ -2.02
SWI5YDR146C CLU1Q03690 1277 aaKnown RBP2.45□□□□□ -2.02
SWI5YDR146C HAL9Q12180 1030 aa2.45□□□□□ -2.02
SWI5YDR146C NPC2Q12408 173 aa2.45□□□□□ -2.02
SWI5YDR146C LAS17Q12446 633 aa2.45□□□□□ -2.02
SWI5YDR146C TUB3P09734 445 aaKnown RBP2.45□□□□□ -2.02
SWI5YDR146C VBA3P25594 458 aa2.45□□□□□ -2.02
SWI5YDR146C PLB1P39105 664 aa2.45□□□□□ -2.02
SWI5YDR146C MNN1P39106 762 aa2.45□□□□□ -2.02
SWI5YDR146C CAF16P43569 289 aa2.45□□□□□ -2.02
SWI5YDR146C YOR352WQ08816 343 aa2.45□□□□□ -2.02
SWI5YDR146C NOP14Q99207 810 aaKnown RBP2.45□□□□□ -2.02
SWI5YDR146C SRD1P09007 221 aa2.44□□□□□ -2.02
SWI5YDR146C CYS3P31373 394 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C SEC21P32074 935 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C UBP5P39944 805 aa2.44□□□□□ -2.02
SWI5YDR146C YIL108WP40483 696 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C IRC24P40580 263 aa2.44□□□□□ -2.02
SWI5YDR146C CEP3P40969 608 aa2.44□□□□□ -2.02
SWI5YDR146C DUS1P53759 423 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C YDR514CQ04408 483 aa2.44□□□□□ -2.02
SWI5YDR146C AIM44Q99299 758 aa2.44□□□□□ -2.02
SWI5YDR146C YLR358CO13565 187 aa2.44□□□□□ -2.02
SWI5YDR146C RPL8AP17076 256 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C PRP4P20053 465 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C PER1P25625 357 aa2.44□□□□□ -2.02
SWI5YDR146C PCL2P25693 308 aa2.44□□□□□ -2.02
SWI5YDR146C CTS1P29029 562 aa2.44□□□□□ -2.02
SWI5YDR146C DCG1P32460 244 aa2.44□□□□□ -2.02
SWI5YDR146C YEL1P34225 687 aa2.44□□□□□ -2.02
SWI5YDR146C FPR3P38911 411 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C RLP7P40693 322 aaKnown RBP2.44□□□□□ -2.02
SWI5YDR146C BUL1P48524 976 aa2.44□□□□□ -2.02
SWI5YDR146C TMA10Q06177 86 aa2.44□□□□□ -2.02
SWI5YDR146C GUP2Q08929 609 aa2.44□□□□□ -2.02
SWI5YDR146C YOR022CQ12204 715 aa2.44□□□□□ -2.02
SWI5YDR146C GSY1P23337 708 aa2.43□□□□□ -2.02
SWI5YDR146C STO1P34160 861 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms