RNA–Protein interactions for RNA: YDL048C

STP4, Transcript of Protein containing a Kruppel-type zinc-finger domain, yeast

Gene STP4, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STP4	YDL048C	PEX18	P38855	283 aa		5.23	□□□□□ -1.57
STP4	YDL048C	YHR219W	P38900	624 aa		5.23	□□□□□ -1.57
STP4	YDL048C	RAD26	P40352	1085 aa		5.23	□□□□□ -1.57
STP4	YDL048C	YJR142W	P47173	342 aa		5.23	□□□□□ -1.57
STP4	YDL048C	ENP2	P48234	707 aa	Known RBP	5.23	□□□□□ -1.57
STP4	YDL048C	SHE10	P53075	577 aa		5.23	□□□□□ -1.57
STP4	YDL048C	PAP2	P53632	584 aa	Known RBP	5.23	□□□□□ -1.57
STP4	YDL048C	RTC4	P53850	401 aa		5.23	□□□□□ -1.57
STP4	YDL048C	RPN4	Q03465	531 aa		5.23	□□□□□ -1.57
STP4	YDL048C	UTP5	Q04177	643 aa	Known RBP	5.23	□□□□□ -1.57
STP4	YDL048C	SPO20	Q04359	397 aa		5.23	□□□□□ -1.57
STP4	YDL048C	YMR111C	Q04461	462 aa	Predicted RBP	5.23	□□□□□ -1.57
STP4	YDL048C	YOR352W	Q08816	343 aa		5.23	□□□□□ -1.57
STP4	YDL048C	RRP36	Q12481	300 aa	Predicted RBP	5.23	□□□□□ -1.57
STP4	YDL048C	ENT1	Q12518	454 aa		5.23	□□□□□ -1.57
STP4	YDL048C	FAR1	P21268	830 aa		5.22	□□□□□ -1.57
STP4	YDL048C	CDC60	P26637	1090 aa	Known RBP	5.22	□□□□□ -1.57
STP4	YDL048C	PRP40	P33203	583 aa	Known RBP	5.22	□□□□□ -1.57
STP4	YDL048C	MNN1	P39106	762 aa		5.22	□□□□□ -1.57
STP4	YDL048C	LAM5	P43560	674 aa		5.22	□□□□□ -1.57
STP4	YDL048C	VTC2	P43585	828 aa		5.22	□□□□□ -1.57
STP4	YDL048C	IOC3	P43596	787 aa		5.22	□□□□□ -1.57
STP4	YDL048C	DAS1	P47005	663 aa		5.22	□□□□□ -1.57
STP4	YDL048C	SRB7	P47822	140 aa		5.22	□□□□□ -1.57
STP4	YDL048C	EFM5	P53200	248 aa	Known RBP	5.22	□□□□□ -1.57
STP4	YDL048C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
STP4	YDL048C	VPS30	Q02948	557 aa		5.22	□□□□□ -1.57
STP4	YDL048C	SUI2	P20459	304 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	RET1	P22276	1149 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	YCR015C	P25616	317 aa		5.21	□□□□□ -1.58
STP4	YDL048C	ZUO1	P32527	433 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	ECM32	P32644	1121 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	PEX6	P33760	1030 aa		5.21	□□□□□ -1.58
STP4	YDL048C	THI80	P35202	319 aa		5.21	□□□□□ -1.58
STP4	YDL048C	CCT3	P39077	534 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	FTR1	P40088	404 aa		5.21	□□□□□ -1.58
STP4	YDL048C	FMP10	P40098	244 aa		5.21	□□□□□ -1.58
STP4	YDL048C	RIC1	P40395	1056 aa		5.21	□□□□□ -1.58
STP4	YDL048C	BUD6	P41697	788 aa		5.21	□□□□□ -1.58
STP4	YDL048C	PXR1	P53335	271 aa	Predicted RBP	5.21	□□□□□ -1.58
STP4	YDL048C	PEX13	P80667	386 aa		5.21	□□□□□ -1.58
STP4	YDL048C	RSM28	Q03430	361 aa		5.21	□□□□□ -1.58
STP4	YDL048C	ESF1	Q06344	628 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	ESC8	Q08119	714 aa		5.21	□□□□□ -1.58
STP4	YDL048C	SLK19	Q08581	821 aa	Known RBP	5.21	□□□□□ -1.58
STP4	YDL048C	YOR378W	Q08902	515 aa		5.21	□□□□□ -1.58
STP4	YDL048C	SLX4	Q12098	748 aa		5.21	□□□□□ -1.58
STP4	YDL048C	YDL177C	Q12257	170 aa		5.21	□□□□□ -1.58
STP4	YDL048C	PET494	P07390	489 aa	Predicted RBP	5.2	□□□□□ -1.58
STP4	YDL048C	RPB2	P08518	1224 aa	Known RBP	5.2	□□□□□ -1.58
STP4	YDL048C	RAD27	P26793	382 aa		5.2	□□□□□ -1.58
STP4	YDL048C	RRF1	P38771	230 aa		5.2	□□□□□ -1.58
STP4	YDL048C	PET100	P38958	111 aa		5.2	□□□□□ -1.58
STP4	YDL048C	POP2	P39008	433 aa		5.2	□□□□□ -1.58
STP4	YDL048C	GCD10	P41814	478 aa		5.2	□□□□□ -1.58
STP4	YDL048C	XKS1	P42826	600 aa		5.2	□□□□□ -1.58
STP4	YDL048C	FOL1	P53848	824 aa		5.2	□□□□□ -1.58
STP4	YDL048C	SPC19	Q03954	165 aa		5.2	□□□□□ -1.58
STP4	YDL048C	RRN11	Q04712	507 aa		5.2	□□□□□ -1.58
STP4	YDL048C	SSQ1	Q05931	657 aa	Predicted RBP	5.2	□□□□□ -1.58
STP4	YDL048C	MDM36	Q06820	579 aa		5.2	□□□□□ -1.58
STP4	YDL048C	YIL002W-A	Q3E7Z5	69 aa		5.2	□□□□□ -1.58
STP4	YDL048C	PHO4	P07270	312 aa	Known RBP	5.2	□□□□□ -1.58
STP4	YDL048C	RED1	P14291	827 aa		5.2	□□□□□ -1.58
STP4	YDL048C	SAM35	P14693	329 aa		5.2	□□□□□ -1.58
STP4	YDL048C	RAD4	P14736	754 aa		5.2	□□□□□ -1.58
STP4	YDL048C	STE11	P23561	717 aa		5.2	□□□□□ -1.58
STP4	YDL048C	DAL80	P26343	269 aa		5.2	□□□□□ -1.58
STP4	YDL048C	TIF3	P34167	436 aa	Known RBP	5.2	□□□□□ -1.58
STP4	YDL048C	YKL222C	P35995	705 aa		5.2	□□□□□ -1.58
STP4	YDL048C	VAC8	P39968	578 aa		5.2	□□□□□ -1.58
STP4	YDL048C	RSM26	P47141	266 aa		5.2	□□□□□ -1.58
STP4	YDL048C	VPS20	Q04272	221 aa		5.2	□□□□□ -1.58
STP4	YDL048C	ERB1	Q04660	807 aa	Known RBP	5.2	□□□□□ -1.58
STP4	YDL048C	YDR286C	Q05530	114 aa		5.2	□□□□□ -1.58
STP4	YDL048C	RSA3	Q05942	220 aa	Known RBP	5.2	□□□□□ -1.58
STP4	YDL048C	TOS4	Q06266	489 aa		5.2	□□□□□ -1.58
STP4	YDL048C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
STP4	YDL048C	PRP6	P19735	899 aa	Predicted RBP	5.19	□□□□□ -1.58
STP4	YDL048C	MRC1	P25588	1096 aa		5.19	□□□□□ -1.58
STP4	YDL048C	YKL050C	P35736	922 aa		5.19	□□□□□ -1.58
STP4	YDL048C	UBP13	P38187	747 aa		5.19	□□□□□ -1.58
STP4	YDL048C	ATG14	P38270	344 aa		5.19	□□□□□ -1.58
STP4	YDL048C	YHR020W	P38708	688 aa	Known RBP	5.19	□□□□□ -1.58
STP4	YDL048C	YHL012W	P38709	493 aa		5.19	□□□□□ -1.58
STP4	YDL048C	SAP185	P40856	1058 aa		5.19	□□□□□ -1.58
STP4	YDL048C	IAH1	P41734	238 aa		5.19	□□□□□ -1.58
STP4	YDL048C	PEX8	P53248	589 aa		5.19	□□□□□ -1.58
STP4	YDL048C	SDA1	P53313	767 aa	Known RBP	5.19	□□□□□ -1.58
STP4	YDL048C	SPO1	P53541	631 aa		5.19	□□□□□ -1.58
STP4	YDL048C	ULP1	Q02724	621 aa		5.19	□□□□□ -1.58
STP4	YDL048C	UTP14	Q04500	899 aa	Known RBP	5.19	□□□□□ -1.58
STP4	YDL048C	DAL4	Q04895	635 aa		5.19	□□□□□ -1.58
STP4	YDL048C	YBL111C	Q3E7Y5	667 aa		5.19	□□□□□ -1.58
STP4	YDL048C	GAL1	P04385	528 aa		5.18	□□□□□ -1.58
STP4	YDL048C	SEC15	P22224	910 aa		5.18	□□□□□ -1.58
STP4	YDL048C	VPS35	P34110	944 aa		5.18	□□□□□ -1.58
STP4	YDL048C	YBL028C	P38202	106 aa		5.18	□□□□□ -1.58
STP4	YDL048C	AIM3	P38266	947 aa	Known RBP	5.18	□□□□□ -1.58
STP4	YDL048C	HSM3	P38348	480 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms