RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YMR018WQ04364 514 aa8.5□□□□□ -1.05
ABP1YCR088W DPL1Q05567 589 aa8.5□□□□□ -1.05
ABP1YCR088W MPC54Q08550 464 aa8.5□□□□□ -1.05
ABP1YCR088W ACM1Q08981 209 aa8.5□□□□□ -1.05
ABP1YCR088W GRX6Q12438 231 aa8.5□□□□□ -1.05
ABP1YCR088W YBL111CQ3E7Y5 667 aa8.5□□□□□ -1.05
ABP1YCR088W TUB2P02557 457 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W PBP2P38151 413 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
ABP1YCR088W SAP185P40856 1058 aa8.5□□□□□ -1.05
ABP1YCR088W MTC3P53077 123 aa8.5□□□□□ -1.05
ABP1YCR088W OYE2Q03558 400 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W YML082WQ04533 649 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W WHI4Q07655 649 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W RIB2Q12362 591 aaKnown RBP8.5□□□□□ -1.05
ABP1YCR088W PHR1P05066 565 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
ABP1YCR088W KRS1P15180 591 aaKnown RBP8.49□□□□□ -1.05
ABP1YCR088W ESS1P22696 170 aa8.49□□□□□ -1.05
ABP1YCR088W CDC10P25342 322 aaKnown RBP8.49□□□□□ -1.05
ABP1YCR088W ILV6P25605 309 aaKnown RBP8.49□□□□□ -1.05
ABP1YCR088W GLN1P32288 370 aaKnown RBP8.49□□□□□ -1.05
ABP1YCR088W CDC11P32458 415 aa8.49□□□□□ -1.05
ABP1YCR088W BLI1P35727 113 aa8.49□□□□□ -1.05
ABP1YCR088W FRA1Q07825 749 aa8.49□□□□□ -1.05
ABP1YCR088W SEC20P28791 383 aa8.48□□□□□ -1.05
ABP1YCR088W RAD54P32863 898 aa8.48□□□□□ -1.05
ABP1YCR088W SWH1P35845 1188 aa8.48□□□□□ -1.05
ABP1YCR088W UBP11P36026 717 aa8.48□□□□□ -1.05
ABP1YCR088W YKR018CP36114 725 aa8.48□□□□□ -1.05
ABP1YCR088W YBL086CP38177 466 aa8.48□□□□□ -1.05
ABP1YCR088W ECM2P38241 364 aaKnown RBP8.48□□□□□ -1.05
ABP1YCR088W EXO5P38289 585 aa8.48□□□□□ -1.05
ABP1YCR088W RRT2P38332 387 aa8.48□□□□□ -1.05
ABP1YCR088W HIS2P38635 335 aa8.48□□□□□ -1.05
ABP1YCR088W VHR2P40041 505 aa8.48□□□□□ -1.05
ABP1YCR088W UTP7P40055 554 aaKnown RBP8.48□□□□□ -1.05
ABP1YCR088W FIG4P42837 879 aa8.48□□□□□ -1.05
ABP1YCR088W VPS4P52917 437 aa8.48□□□□□ -1.05
ABP1YCR088W ATG1P53104 897 aa8.48□□□□□ -1.05
ABP1YCR088W CPR6P53691 371 aaKnown RBP8.48□□□□□ -1.05
ABP1YCR088W EEB1Q02891 456 aa8.48□□□□□ -1.05
ABP1YCR088W PRP22P24384 1145 aaKnown RBP8.48□□□□□ -1.05
ABP1YCR088W LOS1P33418 1100 aaPredicted RBP8.48□□□□□ -1.05
ABP1YCR088W CTR1P49573 406 aa8.48□□□□□ -1.05
ABP1YCR088W SCY1P53009 804 aa8.48□□□□□ -1.05
ABP1YCR088W VID30P53076 958 aa8.48□□□□□ -1.05
ABP1YCR088W ESBP6P53918 673 aa8.48□□□□□ -1.05
ABP1YCR088W UTP6Q02354 440 aaKnown RBP8.48□□□□□ -1.05
ABP1YCR088W YLR177WQ06251 628 aa8.48□□□□□ -1.05
ABP1YCR088W NCA2Q12374 616 aa8.48□□□□□ -1.05
ABP1YCR088W PCK1P10963 549 aa8.47□□□□□ -1.05
ABP1YCR088W CLN3P13365 580 aa8.47□□□□□ -1.05
ABP1YCR088W CHS2P14180 963 aa8.47□□□□□ -1.05
ABP1YCR088W POL3P15436 1097 aa8.47□□□□□ -1.05
ABP1YCR088W GAL11P19659 1081 aa8.47□□□□□ -1.05
ABP1YCR088W CAP1P28495 268 aaKnown RBP8.47□□□□□ -1.05
ABP1YCR088W PLC1P32383 869 aa8.47□□□□□ -1.05
ABP1YCR088W UGA4P32837 571 aa8.47□□□□□ -1.05
ABP1YCR088W STV1P37296 890 aa8.47□□□□□ -1.05
ABP1YCR088W MAP2P38174 421 aaKnown RBP8.47□□□□□ -1.05
ABP1YCR088W TPS3P38426 1054 aaKnown RBP8.47□□□□□ -1.05
ABP1YCR088W GPD2P41911 440 aaKnown RBP8.47□□□□□ -1.05
ABP1YCR088W YJR142WP47173 342 aa8.47□□□□□ -1.05
ABP1YCR088W JJJ1P53863 590 aa8.47□□□□□ -1.05
ABP1YCR088W KIN4Q01919 800 aa8.47□□□□□ -1.05
ABP1YCR088W SLX4Q12098 748 aa8.47□□□□□ -1.05
ABP1YCR088W SEY1Q99287 776 aa8.47□□□□□ -1.05
ABP1YCR088W PMA1P05030 918 aaKnown RBP8.46□□□□□ -1.05
ABP1YCR088W SRD1P09007 221 aa8.46□□□□□ -1.05
ABP1YCR088W ADH4P10127 382 aa8.46□□□□□ -1.05
ABP1YCR088W PUF4P25339 888 aaKnown RBP RIP-Chip data8.46□□□□□ -1.05not detected
ABP1YCR088W RRN6P32786 894 aa8.46□□□□□ -1.05
ABP1YCR088W PTC3P34221 468 aaKnown RBP8.46□□□□□ -1.05
ABP1YCR088W NCL1P38205 684 aaKnown RBP8.46□□□□□ -1.05
ABP1YCR088W TIF5P38431 405 aaKnown RBP8.46□□□□□ -1.05
ABP1YCR088W SIC1P38634 284 aa8.46□□□□□ -1.05
ABP1YCR088W ERC1P38767 581 aa8.46□□□□□ -1.05
ABP1YCR088W END3P39013 349 aa8.46□□□□□ -1.05
ABP1YCR088W YGL039WP53183 348 aaKnown RBP8.46□□□□□ -1.05
ABP1YCR088W NCS2P53923 493 aaPredicted RBP8.46□□□□□ -1.05
ABP1YCR088W TIM8P57744 87 aa8.46□□□□□ -1.05
ABP1YCR088W YPL109CQ02981 657 aa8.46□□□□□ -1.05
ABP1YCR088W SWI6P09959 803 aa8.45□□□□□ -1.06
ABP1YCR088W SRV2P17555 526 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W PRP4P20053 465 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W MMS21P38632 267 aa8.45□□□□□ -1.06
ABP1YCR088W DMA1P38823 416 aa8.45□□□□□ -1.06
ABP1YCR088W EAF6P47128 113 aa8.45□□□□□ -1.06
ABP1YCR088W PHO8P11491 566 aa8.45□□□□□ -1.06
ABP1YCR088W YME1P32795 747 aa8.45□□□□□ -1.06
ABP1YCR088W PGM1P33401 570 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W YKL222CP35995 705 aa8.45□□□□□ -1.06
ABP1YCR088W KEL1P38853 1164 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W TIF4631P39935 952 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W RPN3P40016 523 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W TDA10P42938 290 aa8.45□□□□□ -1.06
ABP1YCR088W VPS70P47161 811 aa8.45□□□□□ -1.06
ABP1YCR088W COS5P47187 383 aa8.45□□□□□ -1.06
ABP1YCR088W MTG1Q03151 367 aaPredicted RBP8.45□□□□□ -1.06
ABP1YCR088W FAR8Q05040 523 aa8.45□□□□□ -1.06
ABP1YCR088W YLR326WQ06170 240 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms