RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	PDIA6	Q15084	440 aa		33.16	■■■□□ 2.9
R3HDM4-208	ENST00000626716	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.16	■■■□□ 2.9
R3HDM4-208	ENST00000626716	PPP1R42	Q7Z4L9	355 aa		33.16	■■■□□ 2.9
R3HDM4-208	ENST00000626716	LMOD3	Q0VAK6	560 aa		33.15	■■■□□ 2.9
R3HDM4-208	ENST00000626716	LRP10	Q7Z4F1	713 aa		33.15	■■■□□ 2.9
R3HDM4-208	ENST00000626716	RBM17	Q96I25	401 aa	Known RBP	33.15	■■■□□ 2.9
R3HDM4-208	ENST00000626716	HACL1	Q9UJ83	578 aa		33.15	■■■□□ 2.9
R3HDM4-208	ENST00000626716	NTSR2	O95665	410 aa		33.14	■■■□□ 2.9
R3HDM4-208	ENST00000626716	GRIPAP1	Q4V328	841 aa		33.14	■■■□□ 2.9
R3HDM4-208	ENST00000626716	PARP10	Q53GL7	1025 aa		33.14	■■■□□ 2.9
R3HDM4-208	ENST00000626716	CRAMP1	Q96RY5	1269 aa		33.14	■■■□□ 2.9
R3HDM4-208	ENST00000626716	SNED1	Q8TER0	1413 aa		33.13	■■■□□ 2.89
R3HDM4-208	ENST00000626716	JDP2	Q8WYK2	163 aa		33.13	■■■□□ 2.89
R3HDM4-208	ENST00000626716	EAPP	Q56P03	285 aa	Predicted RBP	33.11	■■■□□ 2.89
R3HDM4-208	ENST00000626716	GPC2	Q8N158	579 aa		33.11	■■■□□ 2.89
R3HDM4-208	ENST00000626716	EPHX2	P34913	555 aa		33.1	■■■□□ 2.89
R3HDM4-208	ENST00000626716	PROSER3	Q2NL68	480 aa		33.1	■■■□□ 2.89
R3HDM4-208	ENST00000626716	NLRP3	Q96P20	1036 aa		33.1	■■■□□ 2.89
R3HDM4-208	ENST00000626716	PASK	Q96RG2	1323 aa		33.09	■■■□□ 2.89
R3HDM4-208	ENST00000626716	ANXA1	P04083	346 aa		33.09	■■■□□ 2.89
R3HDM4-208	ENST00000626716	HSPA1A	P0DMV8	641 aa	Known RBP	33.09	■■■□□ 2.89
R3HDM4-208	ENST00000626716	HSPA1B	P0DMV9	641 aa	Known RBP	33.09	■■■□□ 2.89
R3HDM4-208	ENST00000626716	DDX10	Q13206	875 aa	Known RBP	33.09	■■■□□ 2.89
R3HDM4-208	ENST00000626716	UTP14A	Q9BVJ6	771 aa	Known RBP	33.09	■■■□□ 2.89
R3HDM4-208	ENST00000626716	SLC10A5	Q5PT55	438 aa		33.08	■■■□□ 2.89
R3HDM4-208	ENST00000626716	C3orf67	Q6ZVT6	689 aa		33.08	■■■□□ 2.89
R3HDM4-208	ENST00000626716	PNMA8A	Q86V59	439 aa	Predicted RBP	33.08	■■■□□ 2.89
R3HDM4-208	ENST00000626716	CLEC11A	Q9Y240	323 aa		33.08	■■■□□ 2.89
R3HDM4-208	ENST00000626716	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.07	■■■□□ 2.88
R3HDM4-208	ENST00000626716	PPEF1	O14829	653 aa	Predicted RBP	33.07	■■■□□ 2.88
R3HDM4-208	ENST00000626716	ITGBL1	O95965	494 aa	Predicted RBP	33.07	■■■□□ 2.88
R3HDM4-208	ENST00000626716	NEUROD2	Q15784	382 aa		33.07	■■■□□ 2.88
R3HDM4-208	ENST00000626716	MKRN1	Q9UHC7	482 aa	Known RBP	33.07	■■■□□ 2.88
R3HDM4-208	ENST00000626716	RNF123	Q5XPI4	1314 aa		33.06	■■■□□ 2.88
R3HDM4-208	ENST00000626716	TCERG1	O14776	1098 aa	Known RBP	33.06	■■■□□ 2.88
R3HDM4-208	ENST00000626716	EIF6	P56537	245 aa	Known RBP	33.06	■■■□□ 2.88
R3HDM4-208	ENST00000626716	COPS6	Q7L5N1	327 aa		33.06	■■■□□ 2.88
R3HDM4-208	ENST00000626716	CCDC146	Q8IYE0	955 aa		33.06	■■■□□ 2.88
R3HDM4-208	ENST00000626716	NECTIN2	Q92692	538 aa		33.05	■■■□□ 2.88
R3HDM4-208	ENST00000626716	LARGE2	Q8N3Y3	721 aa		33.04	■■■□□ 2.88
R3HDM4-208	ENST00000626716	TMX4	Q9H1E5	349 aa	Predicted RBP	33.04	■■■□□ 2.88
R3HDM4-208	ENST00000626716	CHL1	O00533	1208 aa		33.03	■■■□□ 2.88
R3HDM4-208	ENST00000626716	AIMP1	Q12904	312 aa	Known RBP	33.03	■■■□□ 2.88
R3HDM4-208	ENST00000626716	HSP90AB3P	Q58FF7	597 aa		33.03	■■■□□ 2.88
R3HDM4-208	ENST00000626716	GJA3	Q9Y6H8	435 aa		33.03	■■■□□ 2.88
R3HDM4-208	ENST00000626716	XAGE3	Q8WTP9	111 aa		33.02	■■■□□ 2.88
R3HDM4-208	ENST00000626716	RUNDC1	Q96C34	613 aa		33.02	■■■□□ 2.88
R3HDM4-208	ENST00000626716	TMEM88B	A6NKF7	163 aa		33.01	■■■□□ 2.87
R3HDM4-208	ENST00000626716	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.01	■■■□□ 2.87
R3HDM4-208	ENST00000626716	COL4A5	P29400	1685 aa		33.01	■■■□□ 2.87
R3HDM4-208	ENST00000626716	SLC51A	Q86UW1	340 aa		33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	NLRP10	Q86W26	655 aa		33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	TNS4	Q8IZW8	715 aa		33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	CNTROB	Q8N137	903 aa		33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	TRIM35	Q9UPQ4	493 aa		33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	ATP6V0A2	Q9Y487	856 aa		33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	LAS1L	Q9Y4W2	734 aa	Known RBP	33	■■■□□ 2.87
R3HDM4-208	ENST00000626716	CNTNAP1	P78357	1384 aa		32.99	■■■□□ 2.87
R3HDM4-208	ENST00000626716	ADAMTSL1	Q8N6G6	1762 aa		32.99	■■■□□ 2.87
R3HDM4-208	ENST00000626716	TCIRG1	Q13488	830 aa		32.99	■■■□□ 2.87
R3HDM4-208	ENST00000626716	WDR43	Q15061	677 aa	Known RBP eCLIP	32.99	■■■□□ 2.87
R3HDM4-208	ENST00000626716	KRT24	Q2M2I5	525 aa		32.98	■■■□□ 2.87
R3HDM4-208	ENST00000626716	MAP1S	Q66K74	1059 aa	Predicted RBP	32.98	■■■□□ 2.87
R3HDM4-208	ENST00000626716	VPS33B	Q9H267	617 aa		32.98	■■■□□ 2.87
R3HDM4-208	ENST00000626716	BBOX1	O75936	387 aa		32.97	■■■□□ 2.87
R3HDM4-208	ENST00000626716	LMOD1	P29536	600 aa	Predicted RBP	32.97	■■■□□ 2.87
R3HDM4-208	ENST00000626716	NIM1K	Q8IY84	436 aa		32.97	■■■□□ 2.87
R3HDM4-208	ENST00000626716	ABCC4	O15439	1325 aa		32.97	■■■□□ 2.87
R3HDM4-208	ENST00000626716	ANKRD36C	Q5JPF3	1778 aa		32.96	■■■□□ 2.87
R3HDM4-208	ENST00000626716	TRMT112	Q9UI30	125 aa	Known RBP	32.96	■■■□□ 2.87
R3HDM4-208	ENST00000626716	ADAMTS8	Q9UP79	889 aa		32.96	■■■□□ 2.87
R3HDM4-208	ENST00000626716	PPIP5K2	O43314	1243 aa		32.95	■■■□□ 2.87
R3HDM4-208	ENST00000626716	HCLS1	P14317	486 aa	Predicted RBP	32.95	■■■□□ 2.87
R3HDM4-208	ENST00000626716	EPS15	P42566	896 aa		32.93	■■■□□ 2.86
R3HDM4-208	ENST00000626716	SCNN1D	P51172	638 aa		32.93	■■■□□ 2.86
R3HDM4-208	ENST00000626716	AOC3	Q16853	763 aa		32.93	■■■□□ 2.86
R3HDM4-208	ENST00000626716	SP8	Q8IXZ3	490 aa		32.93	■■■□□ 2.86
R3HDM4-208	ENST00000626716	SUPT20H	Q8NEM7	779 aa		32.93	■■■□□ 2.86
R3HDM4-208	ENST00000626716	CHPF2	Q9P2E5	772 aa		32.93	■■■□□ 2.86
R3HDM4-208	ENST00000626716	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.92	■■■□□ 2.86
R3HDM4-208	ENST00000626716	SH3TC1	Q8TE82	1336 aa		32.92	■■■□□ 2.86
R3HDM4-208	ENST00000626716	HOXB7	P09629	217 aa		32.91	■■■□□ 2.86
R3HDM4-208	ENST00000626716	VEGFB	P49765	207 aa		32.91	■■■□□ 2.86
R3HDM4-208	ENST00000626716	DDX46	Q7L014	1031 aa	Known RBP	32.91	■■■□□ 2.86
R3HDM4-208	ENST00000626716	LAMB2	P55268	1798 aa		32.91	■■■□□ 2.86
R3HDM4-208	ENST00000626716	HDGFL1	Q5TGJ6	251 aa		32.9	■■■□□ 2.86
R3HDM4-208	ENST00000626716	LTBP1	Q14766	1721 aa		32.9	■■■□□ 2.86
R3HDM4-208	ENST00000626716	DPP8	Q6V1X1	898 aa	Predicted RBP	32.89	■■■□□ 2.86
R3HDM4-208	ENST00000626716	ANKRD13D	Q6ZTN6	518 aa		32.89	■■■□□ 2.86
R3HDM4-208	ENST00000626716	MPND	Q8N594	471 aa		32.89	■■■□□ 2.86
R3HDM4-208	ENST00000626716	PLBD2	Q8NHP8	589 aa		32.89	■■■□□ 2.86
R3HDM4-208	ENST00000626716	DBF4	Q9UBU7	674 aa	Predicted RBP	32.89	■■■□□ 2.86
R3HDM4-208	ENST00000626716	ZNRF3	Q9ULT6	936 aa		32.89	■■■□□ 2.86
R3HDM4-208	ENST00000626716	USP50	Q70EL3	339 aa	Predicted RBP	32.88	■■■□□ 2.85
R3HDM4-208	ENST00000626716	CFAP44	Q96MT7	982 aa		32.88	■■■□□ 2.85
R3HDM4-208	ENST00000626716	GRAP	Q13588	217 aa		32.87	■■■□□ 2.85
R3HDM4-208	ENST00000626716	DEFB115	Q30KQ5	88 aa		32.87	■■■□□ 2.85
R3HDM4-208	ENST00000626716	GRAPL	Q8TC17	118 aa	Predicted RBP	32.87	■■■□□ 2.85
R3HDM4-208	ENST00000626716	CAPN15	O75808	1086 aa		32.86	■■■□□ 2.85
R3HDM4-208	ENST00000626716	CXCL9	Q07325	125 aa		32.86	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms