RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 JDP2Q8WYK2 163 aa19.05■□□□□ 0.64
TUBB3-215ENST00000625617 NTSR2O95665 410 aa19.04■□□□□ 0.64
TUBB3-215ENST00000625617 HOXA10P31260 410 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-215ENST00000625617 GIGYF2Q6Y7W6 1299 aaKnown RBP19.04■□□□□ 0.64
TUBB3-215ENST00000625617 ZNF34Q8IZ26 560 aa19.04■□□□□ 0.64
TUBB3-215ENST00000625617 SCN4AP35499 1836 aa19.04■□□□□ 0.64
TUBB3-215ENST00000625617 CNTNAP1P78357 1384 aa19.04■□□□□ 0.64
TUBB3-215ENST00000625617 PARP10Q53GL7 1025 aa19.03■□□□□ 0.64
TUBB3-215ENST00000625617 PPP1R42Q7Z4L9 355 aa19.03■□□□□ 0.64
TUBB3-215ENST00000625617 PNMA8AQ86V59 439 aaPredicted RBP19.03■□□□□ 0.64
TUBB3-215ENST00000625617 GPC2Q8N158 579 aa19.03■□□□□ 0.64
TUBB3-215ENST00000625617 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
TUBB3-215ENST00000625617 CLEC11AQ9Y240 323 aa19.03■□□□□ 0.64
TUBB3-215ENST00000625617 PPEF1O14829 653 aaPredicted RBP19.02■□□□□ 0.64
TUBB3-215ENST00000625617 EIF6P56537 245 aaKnown RBP19.02■□□□□ 0.64
TUBB3-215ENST00000625617 RIPK4P57078 832 aa19.02■□□□□ 0.64
TUBB3-215ENST00000625617 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
TUBB3-215ENST00000625617 GRIPAP1Q4V328 841 aa19.02■□□□□ 0.64
TUBB3-215ENST00000625617 CRAMP1Q96RY5 1269 aa19.02■□□□□ 0.64
TUBB3-215ENST00000625617 EIF2S2P20042 333 aaKnown RBP19.01■□□□□ 0.63
TUBB3-215ENST00000625617 RALBP1Q15311 655 aa19.01■□□□□ 0.63
TUBB3-215ENST00000625617 TMEM88BA6NKF7 163 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 CAPN15O75808 1086 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 ITGBL1O95965 494 aaPredicted RBP19■□□□□ 0.63
TUBB3-215ENST00000625617 C3orf67Q6ZVT6 689 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 LRP10Q7Z4F1 713 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 LARGE2Q8N3Y3 721 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 COL4A5P29400 1685 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 PCNTO95613 3336 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 NUP98P52948 1817 aa19■□□□□ 0.63
TUBB3-215ENST00000625617 ADAMTSL1Q8N6G6 1762 aa18.99■□□□□ 0.63
TUBB3-215ENST00000625617 LMOD1P29536 600 aaPredicted RBP18.99■□□□□ 0.63
TUBB3-215ENST00000625617 PDIA6Q15084 440 aa18.99■□□□□ 0.63
TUBB3-215ENST00000625617 PROSER3Q2NL68 480 aa18.99■□□□□ 0.63
TUBB3-215ENST00000625617 SLC51AQ86UW1 340 aa18.99■□□□□ 0.63
TUBB3-215ENST00000625617 UTP14AQ9BVJ6 771 aaKnown RBP18.99■□□□□ 0.63
TUBB3-215ENST00000625617 GJA3Q9Y6H8 435 aa18.99■□□□□ 0.63
TUBB3-215ENST00000625617 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
TUBB3-215ENST00000625617 ANXA1P04083 346 aa18.98■□□□□ 0.63
TUBB3-215ENST00000625617 TMPOP42166 694 aaKnown RBP18.98■□□□□ 0.63
TUBB3-215ENST00000625617 MAP1SQ66K74 1059 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-215ENST00000625617 NLRP3Q96P20 1036 aa18.98■□□□□ 0.63
TUBB3-215ENST00000625617 TMX4Q9H1E5 349 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-215ENST00000625617 NIM1KQ8IY84 436 aa18.97■□□□□ 0.63
TUBB3-215ENST00000625617 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
TUBB3-215ENST00000625617 PPIP5K2O43314 1243 aa18.96■□□□□ 0.63
TUBB3-215ENST00000625617 HSP90AB3PQ58FF7 597 aa18.96■□□□□ 0.63
TUBB3-215ENST00000625617 VEGFBP49765 207 aa18.95■□□□□ 0.62
TUBB3-215ENST00000625617 SCNN1DP51172 638 aa18.95■□□□□ 0.62
TUBB3-215ENST00000625617 NECTIN2Q92692 538 aa18.95■□□□□ 0.62
TUBB3-215ENST00000625617 ATP6V0A2Q9Y487 856 aa18.95■□□□□ 0.62
TUBB3-215ENST00000625617 ABCC4O15439 1325 aa18.95■□□□□ 0.62
TUBB3-215ENST00000625617 MYBBP1AQ9BQG0 1328 aaKnown RBP18.95■□□□□ 0.62
TUBB3-215ENST00000625617 FOXN1O15353 648 aa18.94■□□□□ 0.62
TUBB3-215ENST00000625617 AIMP1Q12904 312 aaKnown RBP18.94■□□□□ 0.62
TUBB3-215ENST00000625617 AOC3Q16853 763 aa18.94■□□□□ 0.62
TUBB3-215ENST00000625617 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
TUBB3-215ENST00000625617 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
TUBB3-215ENST00000625617 XAGE3Q8WTP9 111 aa18.94■□□□□ 0.62
TUBB3-215ENST00000625617 AIDAQ96BJ3 306 aa18.94■□□□□ 0.62
TUBB3-215ENST00000625617 NLRP10Q86W26 655 aa18.93■□□□□ 0.62
TUBB3-215ENST00000625617 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
TUBB3-215ENST00000625617 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
TUBB3-215ENST00000625617 RASSF10A6NK89 507 aa18.92■□□□□ 0.62
TUBB3-215ENST00000625617 EPS15P42566 896 aa18.92■□□□□ 0.62
TUBB3-215ENST00000625617 NEUROD2Q15784 382 aa18.92■□□□□ 0.62
TUBB3-215ENST00000625617 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
TUBB3-215ENST00000625617 VPS33BQ9H267 617 aa18.92■□□□□ 0.62
TUBB3-215ENST00000625617 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
TUBB3-215ENST00000625617 ABT1Q9ULW3 272 aaKnown RBP18.92■□□□□ 0.62
TUBB3-215ENST00000625617 HCLS1P14317 486 aaPredicted RBP18.91■□□□□ 0.62
TUBB3-215ENST00000625617 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
TUBB3-215ENST00000625617 KRT24Q2M2I5 525 aa18.91■□□□□ 0.62
TUBB3-215ENST00000625617 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
TUBB3-215ENST00000625617 SH3TC1Q8TE82 1336 aa18.91■□□□□ 0.62
TUBB3-215ENST00000625617 CHL1O00533 1208 aa18.9■□□□□ 0.62
TUBB3-215ENST00000625617 BBOX1O75936 387 aa18.9■□□□□ 0.62
TUBB3-215ENST00000625617 CTCFP49711 727 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-215ENST00000625617 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
TUBB3-215ENST00000625617 DPP8Q6V1X1 898 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-215ENST00000625617 USP50Q70EL3 339 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-215ENST00000625617 DDX46Q7L014 1031 aaKnown RBP18.9■□□□□ 0.62
TUBB3-215ENST00000625617 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-215ENST00000625617 CHPF2Q9P2E5 772 aa18.9■□□□□ 0.62
TUBB3-215ENST00000625617 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
TUBB3-215ENST00000625617 DEFB115Q30KQ5 88 aa18.89■□□□□ 0.61
TUBB3-215ENST00000625617 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
TUBB3-215ENST00000625617 RUNDC1Q96C34 613 aa18.89■□□□□ 0.61
TUBB3-215ENST00000625617 PRDM10Q9NQV6 1147 aa18.89■□□□□ 0.61
TUBB3-215ENST00000625617 ZNRF3Q9ULT6 936 aa18.89■□□□□ 0.61
TUBB3-215ENST00000625617 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
TUBB3-215ENST00000625617 GRAPQ13588 217 aa18.88■□□□□ 0.61
TUBB3-215ENST00000625617 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
TUBB3-215ENST00000625617 MPNDQ8N594 471 aa18.88■□□□□ 0.61
TUBB3-215ENST00000625617 GRAPLQ8TC17 118 aaPredicted RBP18.88■□□□□ 0.61
TUBB3-215ENST00000625617 ADARB2Q9NS39 739 aaKnown RBP18.88■□□□□ 0.61
TUBB3-215ENST00000625617 GPRC5DQ9NZD1 345 aa18.88■□□□□ 0.61
TUBB3-215ENST00000625617 ANKRD36CQ5JPF3 1778 aa18.88■□□□□ 0.61
TUBB3-215ENST00000625617 HOXB7P09629 217 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 417.5 ms