RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 FZD9O00144 591 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 NTSR2O95665 410 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 EPHX2P34913 555 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 AIMP1Q12904 312 aaKnown RBP12.23□□□□□ -0.45
TARDBP-227ENST00000622057 CC2D2BQ6DHV5 1058 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 NLRP3Q96P20 1036 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 PSMD1Q99460 953 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
TARDBP-227ENST00000622057 GJA3Q9Y6H8 435 aa12.23□□□□□ -0.45
TARDBP-227ENST00000622057 RNF123Q5XPI4 1314 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
TARDBP-227ENST00000622057 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
TARDBP-227ENST00000622057 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 PDIA6Q15084 440 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 PROSER3Q2NL68 480 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 PARP10Q53GL7 1025 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
TARDBP-227ENST00000622057 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
TARDBP-227ENST00000622057 CACNA1SQ13698 1873 aa12.22□□□□□ -0.45
TARDBP-227ENST00000622057 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
TARDBP-227ENST00000622057 CAPN15O75808 1086 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 C3orf67Q6ZVT6 689 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 SLC51AQ86UW1 340 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 TNS4Q8IZW8 715 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 GPC2Q8N158 579 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 CRAMP1Q96RY5 1269 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 BABAM1Q9NWV8 329 aa12.21□□□□□ -0.45
TARDBP-227ENST00000622057 DICER1Q9UPY3 1922 aaKnown RBP12.21□□□□□ -0.46
TARDBP-227ENST00000622057 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
TARDBP-227ENST00000622057 TMEM88BA6NKF7 163 aa12.2□□□□□ -0.46
TARDBP-227ENST00000622057 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-227ENST00000622057 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
TARDBP-227ENST00000622057 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-227ENST00000622057 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-227ENST00000622057 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
TARDBP-227ENST00000622057 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
TARDBP-227ENST00000622057 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
TARDBP-227ENST00000622057 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
TARDBP-227ENST00000622057 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
TARDBP-227ENST00000622057 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
TARDBP-227ENST00000622057 HSP90AB3PQ58FF7 597 aa12.19□□□□□ -0.46
TARDBP-227ENST00000622057 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
TARDBP-227ENST00000622057 ZNF428Q96B54 188 aa12.19□□□□□ -0.46
TARDBP-227ENST00000622057 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
TARDBP-227ENST00000622057 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-227ENST00000622057 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
TARDBP-227ENST00000622057 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
TARDBP-227ENST00000622057 PPIP5K2O43314 1243 aa12.18□□□□□ -0.46
TARDBP-227ENST00000622057 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-227ENST00000622057 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
TARDBP-227ENST00000622057 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
TARDBP-227ENST00000622057 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
TARDBP-227ENST00000622057 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
TARDBP-227ENST00000622057 PCNTO95613 3336 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 CHL1O00533 1208 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 EPS15P42566 896 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 AOC3Q16853 763 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 DDX21Q9NR30 783 aaKnown RBP eCLIP12.17□□□□□ -0.46
TARDBP-227ENST00000622057 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 ATP6V0A2Q9Y487 856 aa12.17□□□□□ -0.46
TARDBP-227ENST00000622057 NUP98P52948 1817 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 ABCC4O15439 1325 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 BBOX1O75936 387 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 VEGFBP49765 207 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 DEFB115Q30KQ5 88 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
TARDBP-227ENST00000622057 CHPF2Q9P2E5 772 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
TARDBP-227ENST00000622057 SCNN1DP51172 638 aa12.15□□□□□ -0.46
TARDBP-227ENST00000622057 HDGFL1Q5TGJ6 251 aa12.15□□□□□ -0.46
TARDBP-227ENST00000622057 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-227ENST00000622057 SP8Q8IXZ3 490 aa12.15□□□□□ -0.46
TARDBP-227ENST00000622057 MPNDQ8N594 471 aa12.15□□□□□ -0.46
TARDBP-227ENST00000622057 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
TARDBP-227ENST00000622057 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
TARDBP-227ENST00000622057 SH3TC1Q8TE82 1336 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 SCN4AP35499 1836 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 FOXN1O15353 648 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
TARDBP-227ENST00000622057 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 AIDAQ96BJ3 306 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
TARDBP-227ENST00000622057 COL4A5P29400 1685 aa12.13□□□□□ -0.47
TARDBP-227ENST00000622057 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
TARDBP-227ENST00000622057 CXCL9Q07325 125 aa12.13□□□□□ -0.47
TARDBP-227ENST00000622057 GRAPQ13588 217 aa12.13□□□□□ -0.47
TARDBP-227ENST00000622057 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-227ENST00000622057 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-227ENST00000622057 PLBD2Q8NHP8 589 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms