RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 EIF2S2P20042 333 aaKnown RBP29.75■■■□□ 2.35
SSBP4-203ENST00000593641 EAPPQ56P03 285 aaPredicted RBP29.75■■■□□ 2.35
SSBP4-203ENST00000593641 PPP1R42Q7Z4L9 355 aa29.75■■■□□ 2.35
SSBP4-203ENST00000593641 SNED1Q8TER0 1413 aa29.75■■■□□ 2.35
SSBP4-203ENST00000593641 JDP2Q8WYK2 163 aa29.75■■■□□ 2.35
SSBP4-203ENST00000593641 FZD9O00144 591 aa29.74■■■□□ 2.35
SSBP4-203ENST00000593641 HOXA10P31260 410 aaPredicted RBP29.74■■■□□ 2.35
SSBP4-203ENST00000593641 RBM17Q96I25 401 aaKnown RBP29.74■■■□□ 2.35
SSBP4-203ENST00000593641 BABAM1Q9NWV8 329 aa29.74■■■□□ 2.35
SSBP4-203ENST00000593641 NTSR2O95665 410 aa29.73■■■□□ 2.35
SSBP4-203ENST00000593641 GRIPAP1Q4V328 841 aa29.73■■■□□ 2.35
SSBP4-203ENST00000593641 PARP10Q53GL7 1025 aa29.73■■■□□ 2.35
SSBP4-203ENST00000593641 EPHX2P34913 555 aa29.72■■■□□ 2.35
SSBP4-203ENST00000593641 TMPOP42166 694 aaKnown RBP29.72■■■□□ 2.35
SSBP4-203ENST00000593641 RNF123Q5XPI4 1314 aa29.71■■■□□ 2.35
SSBP4-203ENST00000593641 GPC2Q8N158 579 aa29.71■■■□□ 2.35
SSBP4-203ENST00000593641 CRAMP1Q96RY5 1269 aa29.71■■■□□ 2.35
SSBP4-203ENST00000593641 MKRN1Q9UHC7 482 aaKnown RBP29.71■■■□□ 2.35
SSBP4-203ENST00000593641 CLEC11AQ9Y240 323 aa29.71■■■□□ 2.35
SSBP4-203ENST00000593641 ANKRD36CQ5JPF3 1778 aa29.71■■■□□ 2.35
SSBP4-203ENST00000593641 PASKQ96RG2 1323 aa29.71■■■□□ 2.35
SSBP4-203ENST00000593641 PPEF1O14829 653 aaPredicted RBP29.7■■■□□ 2.35
SSBP4-203ENST00000593641 PNMA8AQ86V59 439 aaPredicted RBP29.7■■■□□ 2.35
SSBP4-203ENST00000593641 EIF6P56537 245 aaKnown RBP29.69■■■□□ 2.34
SSBP4-203ENST00000593641 NLRP3Q96P20 1036 aa29.69■■■□□ 2.34
SSBP4-203ENST00000593641 ADAMTSL1Q8N6G6 1762 aa29.69■■■□□ 2.34
SSBP4-203ENST00000593641 PDIA6Q15084 440 aa29.68■■■□□ 2.34
SSBP4-203ENST00000593641 LRP10Q7Z4F1 713 aa29.68■■■□□ 2.34
SSBP4-203ENST00000593641 UTP14AQ9BVJ6 771 aaKnown RBP29.68■■■□□ 2.34
SSBP4-203ENST00000593641 TMX4Q9H1E5 349 aaPredicted RBP29.68■■■□□ 2.34
SSBP4-203ENST00000593641 TCERG1O14776 1098 aaKnown RBP29.67■■■□□ 2.34
SSBP4-203ENST00000593641 ANXA1P04083 346 aa29.67■■■□□ 2.34
SSBP4-203ENST00000593641 PROSER3Q2NL68 480 aa29.67■■■□□ 2.34
SSBP4-203ENST00000593641 LARGE2Q8N3Y3 721 aa29.67■■■□□ 2.34
SSBP4-203ENST00000593641 MYBBP1AQ9BQG0 1328 aaKnown RBP29.67■■■□□ 2.34
SSBP4-203ENST00000593641 HSP90AB3PQ58FF7 597 aa29.66■■■□□ 2.34
SSBP4-203ENST00000593641 TNS4Q8IZW8 715 aa29.66■■■□□ 2.34
SSBP4-203ENST00000593641 NEUROD2Q15784 382 aa29.65■■■□□ 2.34
SSBP4-203ENST00000593641 C3orf67Q6ZVT6 689 aa29.65■■■□□ 2.34
SSBP4-203ENST00000593641 GJA3Q9Y6H8 435 aa29.65■■■□□ 2.34
SSBP4-203ENST00000593641 COL4A5P29400 1685 aa29.65■■■□□ 2.34
SSBP4-203ENST00000593641 CNTNAP1P78357 1384 aa29.64■■■□□ 2.34
SSBP4-203ENST00000593641 TMEM88BA6NKF7 163 aa29.64■■■□□ 2.34
SSBP4-203ENST00000593641 LMOD1P29536 600 aaPredicted RBP29.64■■■□□ 2.34
SSBP4-203ENST00000593641 NECTIN2Q92692 538 aa29.64■■■□□ 2.34
SSBP4-203ENST00000593641 LAMB2P55268 1798 aa29.63■■■□□ 2.33
SSBP4-203ENST00000593641 ITGBL1O95965 494 aaPredicted RBP29.63■■■□□ 2.33
SSBP4-203ENST00000593641 DDX10Q13206 875 aaKnown RBP29.63■■■□□ 2.33
SSBP4-203ENST00000593641 CCDC146Q8IYE0 955 aa29.63■■■□□ 2.33
SSBP4-203ENST00000593641 AIMP1Q12904 312 aaKnown RBP29.62■■■□□ 2.33
SSBP4-203ENST00000593641 WDR43Q15061 677 aaKnown RBP eCLIP29.62■■■□□ 2.33
SSBP4-203ENST00000593641 SLC10A5Q5PT55 438 aa29.62■■■□□ 2.33
SSBP4-203ENST00000593641 COPS6Q7L5N1 327 aa29.62■■■□□ 2.33
SSBP4-203ENST00000593641 NIM1KQ8IY84 436 aa29.61■■■□□ 2.33
SSBP4-203ENST00000593641 XAGE3Q8WTP9 111 aa29.61■■■□□ 2.33
SSBP4-203ENST00000593641 MAP1SQ66K74 1059 aaPredicted RBP29.6■■■□□ 2.33
SSBP4-203ENST00000593641 CNTROBQ8N137 903 aa29.6■■■□□ 2.33
SSBP4-203ENST00000593641 ATP6V0A2Q9Y487 856 aa29.6■■■□□ 2.33
SSBP4-203ENST00000593641 LAS1LQ9Y4W2 734 aaKnown RBP29.6■■■□□ 2.33
SSBP4-203ENST00000593641 ABCC4O15439 1325 aa29.6■■■□□ 2.33
SSBP4-203ENST00000593641 PPIP5K2O43314 1243 aa29.59■■■□□ 2.33
SSBP4-203ENST00000593641 SLC51AQ86UW1 340 aa29.59■■■□□ 2.33
SSBP4-203ENST00000593641 DDX21Q9NR30 783 aaKnown RBP eCLIP29.59■■■□□ 2.33
SSBP4-203ENST00000593641 LTBP1Q14766 1721 aa29.58■■■□□ 2.33
SSBP4-203ENST00000593641 NLRP10Q86W26 655 aa29.58■■■□□ 2.33
SSBP4-203ENST00000593641 RUNDC1Q96C34 613 aa29.58■■■□□ 2.33
SSBP4-203ENST00000593641 CHL1O00533 1208 aa29.57■■■□□ 2.32
SSBP4-203ENST00000593641 TCIRG1Q13488 830 aa29.56■■■□□ 2.32
SSBP4-203ENST00000593641 KRT24Q2M2I5 525 aa29.56■■■□□ 2.32
SSBP4-203ENST00000593641 SUPT20HQ8NEM7 779 aa29.56■■■□□ 2.32
SSBP4-203ENST00000593641 VPS33BQ9H267 617 aa29.56■■■□□ 2.32
SSBP4-203ENST00000593641 TRMT112Q9UI30 125 aaKnown RBP29.56■■■□□ 2.32
SSBP4-203ENST00000593641 SH3TC1Q8TE82 1336 aa29.55■■■□□ 2.32
SSBP4-203ENST00000593641 CAPN15O75808 1086 aa29.55■■■□□ 2.32
SSBP4-203ENST00000593641 HCLS1P14317 486 aaPredicted RBP29.55■■■□□ 2.32
SSBP4-203ENST00000593641 SCNN1DP51172 638 aa29.55■■■□□ 2.32
SSBP4-203ENST00000593641 AOC3Q16853 763 aa29.55■■■□□ 2.32
SSBP4-203ENST00000593641 BBOX1O75936 387 aa29.54■■■□□ 2.32
SSBP4-203ENST00000593641 CHPF2Q9P2E5 772 aa29.54■■■□□ 2.32
SSBP4-203ENST00000593641 TRIM35Q9UPQ4 493 aa29.54■■■□□ 2.32
SSBP4-203ENST00000593641 VEGFBP49765 207 aa29.53■■■□□ 2.32
SSBP4-203ENST00000593641 HDGFL1Q5TGJ6 251 aa29.53■■■□□ 2.32
SSBP4-203ENST00000593641 DPP8Q6V1X1 898 aaPredicted RBP29.53■■■□□ 2.32
SSBP4-203ENST00000593641 DDX46Q7L014 1031 aaKnown RBP29.53■■■□□ 2.32
SSBP4-203ENST00000593641 HOXB7P09629 217 aa29.52■■■□□ 2.32
SSBP4-203ENST00000593641 EPS15P42566 896 aa29.52■■■□□ 2.32
SSBP4-203ENST00000593641 AIDAQ96BJ3 306 aa29.52■■■□□ 2.32
SSBP4-203ENST00000593641 TAF1P21675 1872 aa29.52■■■□□ 2.32
SSBP4-203ENST00000593641 USP50Q70EL3 339 aaPredicted RBP29.51■■■□□ 2.31
SSBP4-203ENST00000593641 SP8Q8IXZ3 490 aa29.51■■■□□ 2.31
SSBP4-203ENST00000593641 RTFDC1Q9BY42 306 aaPredicted RBP29.51■■■□□ 2.31
SSBP4-203ENST00000593641 TRPM7Q96QT4 1865 aa29.51■■■□□ 2.31
SSBP4-203ENST00000593641 MPNDQ8N594 471 aa29.5■■■□□ 2.31
SSBP4-203ENST00000593641 ZNRF3Q9ULT6 936 aa29.5■■■□□ 2.31
SSBP4-203ENST00000593641 ABT1Q9ULW3 272 aaKnown RBP29.5■■■□□ 2.31
SSBP4-203ENST00000593641 ADAMTS8Q9UP79 889 aa29.5■■■□□ 2.31
SSBP4-203ENST00000593641 RASSF10A6NK89 507 aa29.49■■■□□ 2.31
SSBP4-203ENST00000593641 GRAPQ13588 217 aa29.49■■■□□ 2.31
SSBP4-203ENST00000593641 DEFB115Q30KQ5 88 aa29.49■■■□□ 2.31
SSBP4-203ENST00000593641 PLBD2Q8NHP8 589 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms