RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 SPTLC3Q9NUV7 552 aa17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
PRKCSH-212ENST00000591462 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 ARHGEF25Q86VW2 580 aa17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 USP21Q9UK80 565 aa17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
PRKCSH-212ENST00000591462 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 POTEAQ6S8J7 498 aa17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 PRIMPOLQ96LW4 560 aa17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 KCNF1Q9H3M0 494 aa17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 PRDM4Q9UKN5 801 aa17.13■□□□□ 0.33
PRKCSH-212ENST00000591462 PLCH1Q4KWH8 1693 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■■■■■ 33.5
PRKCSH-212ENST00000591462 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 STRN4Q9NRL3 753 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 SLIT2O94813 1529 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 ANXA1P04083 346 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 ZSWIM6Q9HCJ5 1215 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 PDRG1Q9NUG6 133 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 ATP6V1DQ9Y5K8 247 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 CPDO75976 1380 aa17.12■□□□□ 0.33
PRKCSH-212ENST00000591462 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 ME3Q16798 604 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 KCNB2Q92953 911 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 KCNQ3O43525 872 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
PRKCSH-212ENST00000591462 LTN1O94822 1766 aa17.1■□□□□ 0.33
PRKCSH-212ENST00000591462 NECAB1Q8N987 351 aa17.1■□□□□ 0.33
PRKCSH-212ENST00000591462 PYCARDQ9ULZ3 195 aa17.1■□□□□ 0.33
PRKCSH-212ENST00000591462 ADCY9O60503 1353 aa17.1■□□□□ 0.33
PRKCSH-212ENST00000591462 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 KIAA1524Q8TCG1 905 aa17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 CCDC94Q9BW85 323 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 TM6SF1Q9BZW5 370 aa17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 LMO7Q8WWI1 1683 aa17.09■□□□□ 0.33
PRKCSH-212ENST00000591462 TPCN1Q9ULQ1 816 aa17.08■□□□□ 0.33
PRKCSH-212ENST00000591462 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-212ENST00000591462 CYP46A1Q9Y6A2 500 aa17.08■□□□□ 0.33
PRKCSH-212ENST00000591462 COL18A1P39060 1754 aa17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 SH2B1Q9NRF2 756 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-212ENST00000591462 MTX1Q13505 466 aa17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 LARP1Q6PKG0 1096 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 ZSCAN31Q96LW9 406 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 ECHDC1Q9NTX5 307 aa17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 CCDC171Q6TFL3 1326 aa17.07■□□□□ 0.32
PRKCSH-212ENST00000591462 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 CLASRPQ8N2M8 674 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 NRAPQ86VF7 1730 aa17.06■□□□□ 0.32
PRKCSH-212ENST00000591462 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 LIG1P18858 919 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 EVA1CP58658 441 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 CHMP3Q9Y3E7 222 aa17.05■□□□□ 0.32
PRKCSH-212ENST00000591462 HOXB7P09629 217 aa17.04■□□□□ 0.32
PRKCSH-212ENST00000591462 CCDC192P0DO97 292 aa17.04■□□□□ 0.32
PRKCSH-212ENST00000591462 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
PRKCSH-212ENST00000591462 KIF3AQ9Y496 699 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms