RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PSMD1Q99460 953 aa20.89■□□□□ 0.93
ERCC1-206ENST00000588300 ANKRD36CQ5JPF3 1778 aa20.88■□□□□ 0.93
ERCC1-206ENST00000588300 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
ERCC1-206ENST00000588300 PDIA6Q15084 440 aa20.88■□□□□ 0.93
ERCC1-206ENST00000588300 LRP10Q7Z4F1 713 aa20.88■□□□□ 0.93
ERCC1-206ENST00000588300 LDHDQ86WU2 507 aa20.88■□□□□ 0.93
ERCC1-206ENST00000588300 TAF1DQ9H5J8 278 aaPredicted RBP20.88■□□□□ 0.93
ERCC1-206ENST00000588300 JDP2Q8WYK2 163 aa20.87■□□□□ 0.93
ERCC1-206ENST00000588300 RBM17Q96I25 401 aaKnown RBP20.87■□□□□ 0.93
ERCC1-206ENST00000588300 FZD9O00144 591 aa20.86■□□□□ 0.93
ERCC1-206ENST00000588300 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
ERCC1-206ENST00000588300 CCDC146Q8IYE0 955 aa20.86■□□□□ 0.93
ERCC1-206ENST00000588300 CRAMP1Q96RY5 1269 aa20.86■□□□□ 0.93
ERCC1-206ENST00000588300 CREBZFQ9NS37 354 aa20.86■□□□□ 0.93
ERCC1-206ENST00000588300 HACL1Q9UJ83 578 aa20.86■□□□□ 0.93
ERCC1-206ENST00000588300 ANXA1P04083 346 aa20.85■□□□□ 0.93
ERCC1-206ENST00000588300 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
ERCC1-206ENST00000588300 PROSER3Q2NL68 480 aa20.85■□□□□ 0.93
ERCC1-206ENST00000588300 PPEF1O14829 653 aaPredicted RBP20.84■□□□□ 0.93
ERCC1-206ENST00000588300 WDR43Q15061 677 aaKnown RBP eCLIP20.84■□□□□ 0.93
ERCC1-206ENST00000588300 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
ERCC1-206ENST00000588300 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
ERCC1-206ENST00000588300 RNF123Q5XPI4 1314 aa20.83■□□□□ 0.93
ERCC1-206ENST00000588300 ADAMTSL1Q8N6G6 1762 aa20.83■□□□□ 0.93
ERCC1-206ENST00000588300 EAPPQ56P03 285 aaPredicted RBP20.83■□□□□ 0.93
ERCC1-206ENST00000588300 HSP90AB3PQ58FF7 597 aa20.83■□□□□ 0.93
ERCC1-206ENST00000588300 GPC2Q8N158 579 aa20.83■□□□□ 0.93
ERCC1-206ENST00000588300 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
ERCC1-206ENST00000588300 RUNDC1Q96C34 613 aa20.83■□□□□ 0.93
ERCC1-206ENST00000588300 EPHX2P34913 555 aa20.82■□□□□ 0.92
ERCC1-206ENST00000588300 EIF6P56537 245 aaKnown RBP20.82■□□□□ 0.92
ERCC1-206ENST00000588300 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
ERCC1-206ENST00000588300 COPS6Q7L5N1 327 aa20.82■□□□□ 0.92
ERCC1-206ENST00000588300 COL4A5P29400 1685 aa20.82■□□□□ 0.92
ERCC1-206ENST00000588300 LAMB2P55268 1798 aa20.82■□□□□ 0.92
ERCC1-206ENST00000588300 PASKQ96RG2 1323 aa20.81■□□□□ 0.92
ERCC1-206ENST00000588300 CHL1O00533 1208 aa20.81■□□□□ 0.92
ERCC1-206ENST00000588300 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 HSPA1AP0DMV8 641 aaKnown RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 HSPA1BP0DMV9 641 aaKnown RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
ERCC1-206ENST00000588300 PNMA8AQ86V59 439 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 XAGE3Q8WTP9 111 aa20.81■□□□□ 0.92
ERCC1-206ENST00000588300 TMX4Q9H1E5 349 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 CLEC11AQ9Y240 323 aa20.81■□□□□ 0.92
ERCC1-206ENST00000588300 LAS1LQ9Y4W2 734 aaKnown RBP20.81■□□□□ 0.92
ERCC1-206ENST00000588300 PCNTO95613 3336 aa20.8■□□□□ 0.92
ERCC1-206ENST00000588300 COL13A1Q5TAT6 717 aaPredicted RBP20.8■□□□□ 0.92
ERCC1-206ENST00000588300 LARGE2Q8N3Y3 721 aa20.8■□□□□ 0.92
ERCC1-206ENST00000588300 DDX21Q9NR30 783 aaKnown RBP eCLIP20.8■□□□□ 0.92
ERCC1-206ENST00000588300 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
ERCC1-206ENST00000588300 KRT24Q2M2I5 525 aa20.79■□□□□ 0.92
ERCC1-206ENST00000588300 MKRN1Q9UHC7 482 aaKnown RBP20.79■□□□□ 0.92
ERCC1-206ENST00000588300 GJA3Q9Y6H8 435 aa20.79■□□□□ 0.92
ERCC1-206ENST00000588300 NLRP10Q86W26 655 aa20.78■□□□□ 0.92
ERCC1-206ENST00000588300 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
ERCC1-206ENST00000588300 ABCC4O15439 1325 aa20.78■□□□□ 0.92
ERCC1-206ENST00000588300 ITGBL1O95965 494 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-206ENST00000588300 LMOD1P29536 600 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-206ENST00000588300 TCIRG1Q13488 830 aa20.77■□□□□ 0.92
ERCC1-206ENST00000588300 SLC51AQ86UW1 340 aa20.77■□□□□ 0.92
ERCC1-206ENST00000588300 CHPF2Q9P2E5 772 aa20.77■□□□□ 0.92
ERCC1-206ENST00000588300 ADAMTS8Q9UP79 889 aa20.77■□□□□ 0.92
ERCC1-206ENST00000588300 CNTNAP1P78357 1384 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 TMEM88BA6NKF7 163 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 PPIP5K2O43314 1243 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 HOXB7P09629 217 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 HDGFL1Q5TGJ6 251 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 NIM1KQ8IY84 436 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 TRMT112Q9UI30 125 aaKnown RBP20.76■□□□□ 0.91
ERCC1-206ENST00000588300 SH3TC1Q8TE82 1336 aa20.76■□□□□ 0.91
ERCC1-206ENST00000588300 LTBP1Q14766 1721 aa20.75■□□□□ 0.91
ERCC1-206ENST00000588300 HCLS1P14317 486 aaPredicted RBP20.75■□□□□ 0.91
ERCC1-206ENST00000588300 VPS33BQ9H267 617 aa20.75■□□□□ 0.91
ERCC1-206ENST00000588300 BBOX1O75936 387 aa20.74■□□□□ 0.91
ERCC1-206ENST00000588300 MAP1SQ66K74 1059 aaPredicted RBP20.74■□□□□ 0.91
ERCC1-206ENST00000588300 CNTROBQ8N137 903 aa20.74■□□□□ 0.91
ERCC1-206ENST00000588300 SUPT20HQ8NEM7 779 aa20.74■□□□□ 0.91
ERCC1-206ENST00000588300 SCNN1DP51172 638 aa20.73■□□□□ 0.91
ERCC1-206ENST00000588300 AOC3Q16853 763 aa20.73■□□□□ 0.91
ERCC1-206ENST00000588300 DDX46Q7L014 1031 aaKnown RBP20.73■□□□□ 0.91
ERCC1-206ENST00000588300 SP8Q8IXZ3 490 aa20.73■□□□□ 0.91
ERCC1-206ENST00000588300 TNS4Q8IZW8 715 aa20.73■□□□□ 0.91
ERCC1-206ENST00000588300 PLBD2Q8NHP8 589 aa20.73■□□□□ 0.91
ERCC1-206ENST00000588300 CFAP44Q96MT7 982 aa20.73■□□□□ 0.91
ERCC1-206ENST00000588300 PRKRIP1Q9H875 184 aaPredicted RBP20.73■□□□□ 0.91
ERCC1-206ENST00000588300 DBF4Q9UBU7 674 aaPredicted RBP20.73■□□□□ 0.91
ERCC1-206ENST00000588300 DDX60Q8IY21 1712 aaKnown RBP20.73■□□□□ 0.91
ERCC1-206ENST00000588300 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
ERCC1-206ENST00000588300 RTFDC1Q9BY42 306 aaPredicted RBP20.72■□□□□ 0.91
ERCC1-206ENST00000588300 GRAPQ13588 217 aa20.71■□□□□ 0.91
ERCC1-206ENST00000588300 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
ERCC1-206ENST00000588300 MPNDQ8N594 471 aa20.71■□□□□ 0.91
ERCC1-206ENST00000588300 GRAPLQ8TC17 118 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-206ENST00000588300 TAF1P21675 1872 aa20.71■□□□□ 0.91
ERCC1-206ENST00000588300 EPS15P42566 896 aa20.7■□□□□ 0.9
ERCC1-206ENST00000588300 DUSP27Q5VZP5 1158 aa20.7■□□□□ 0.9
ERCC1-206ENST00000588300 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
ERCC1-206ENST00000588300 ZNRF3Q9ULT6 936 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms