RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
VAT1-205ENST00000587173 TMPOP42166 694 aaKnown RBP20.61■□□□□ 0.89
VAT1-205ENST00000587173 PDIA6Q15084 440 aa20.61■□□□□ 0.89
VAT1-205ENST00000587173 EAPPQ56P03 285 aaPredicted RBP20.61■□□□□ 0.89
VAT1-205ENST00000587173 CC2D2BQ6DHV5 1058 aa20.61■□□□□ 0.89
VAT1-205ENST00000587173 LRP10Q7Z4F1 713 aa20.61■□□□□ 0.89
VAT1-205ENST00000587173 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
VAT1-205ENST00000587173 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
VAT1-205ENST00000587173 BABAM1Q9NWV8 329 aa20.61■□□□□ 0.89
VAT1-205ENST00000587173 NUP98P52948 1817 aa20.6■□□□□ 0.89
VAT1-205ENST00000587173 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
VAT1-205ENST00000587173 PROSER3Q2NL68 480 aa20.6■□□□□ 0.89
VAT1-205ENST00000587173 PARP10Q53GL7 1025 aa20.6■□□□□ 0.89
VAT1-205ENST00000587173 JDP2Q8WYK2 163 aa20.6■□□□□ 0.89
VAT1-205ENST00000587173 MKRN1Q9UHC7 482 aaKnown RBP20.6■□□□□ 0.89
VAT1-205ENST00000587173 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
VAT1-205ENST00000587173 PASKQ96RG2 1323 aa20.59■□□□□ 0.89
VAT1-205ENST00000587173 PPEF1O14829 653 aaPredicted RBP20.59■□□□□ 0.89
VAT1-205ENST00000587173 ANXA1P04083 346 aa20.59■□□□□ 0.89
VAT1-205ENST00000587173 EPHX2P34913 555 aa20.59■□□□□ 0.89
VAT1-205ENST00000587173 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
VAT1-205ENST00000587173 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
VAT1-205ENST00000587173 SLC51AQ86UW1 340 aa20.58■□□□□ 0.89
VAT1-205ENST00000587173 GPC2Q8N158 579 aa20.58■□□□□ 0.89
VAT1-205ENST00000587173 CLEC11AQ9Y240 323 aa20.58■□□□□ 0.89
VAT1-205ENST00000587173 SCN4AP35499 1836 aa20.57■□□□□ 0.88
VAT1-205ENST00000587173 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
VAT1-205ENST00000587173 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
VAT1-205ENST00000587173 GRIPAP1Q4V328 841 aa20.57■□□□□ 0.88
VAT1-205ENST00000587173 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
VAT1-205ENST00000587173 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
VAT1-205ENST00000587173 NLRP3Q96P20 1036 aa20.57■□□□□ 0.88
VAT1-205ENST00000587173 UTP14AQ9BVJ6 771 aaKnown RBP20.57■□□□□ 0.88
VAT1-205ENST00000587173 EIF6P56537 245 aaKnown RBP20.56■□□□□ 0.88
VAT1-205ENST00000587173 NEUROD2Q15784 382 aa20.56■□□□□ 0.88
VAT1-205ENST00000587173 PNMA8AQ86V59 439 aaPredicted RBP20.56■□□□□ 0.88
VAT1-205ENST00000587173 COL4A5P29400 1685 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 ITGBL1O95965 494 aaPredicted RBP20.55■□□□□ 0.88
VAT1-205ENST00000587173 AIMP1Q12904 312 aaKnown RBP20.55■□□□□ 0.88
VAT1-205ENST00000587173 COPS6Q7L5N1 327 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 XAGE3Q8WTP9 111 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 GJA3Q9Y6H8 435 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
VAT1-205ENST00000587173 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
VAT1-205ENST00000587173 TMEM88BA6NKF7 163 aa20.53■□□□□ 0.88
VAT1-205ENST00000587173 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
VAT1-205ENST00000587173 HSP90AB3PQ58FF7 597 aa20.53■□□□□ 0.88
VAT1-205ENST00000587173 TMX4Q9H1E5 349 aaPredicted RBP20.53■□□□□ 0.88
VAT1-205ENST00000587173 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
VAT1-205ENST00000587173 PCNTO95613 3336 aa20.53■□□□□ 0.88
VAT1-205ENST00000587173 CHL1O00533 1208 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
VAT1-205ENST00000587173 KRT24Q2M2I5 525 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 MAP1SQ66K74 1059 aaPredicted RBP20.52■□□□□ 0.88
VAT1-205ENST00000587173 NLRP10Q86W26 655 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 NIM1KQ8IY84 436 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
VAT1-205ENST00000587173 ABCC4O15439 1325 aa20.52■□□□□ 0.87
VAT1-205ENST00000587173 ADAMTSL1Q8N6G6 1762 aa20.51■□□□□ 0.87
VAT1-205ENST00000587173 PPIP5K2O43314 1243 aa20.51■□□□□ 0.87
VAT1-205ENST00000587173 DDX21Q9NR30 783 aaKnown RBP eCLIP20.51■□□□□ 0.87
VAT1-205ENST00000587173 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
VAT1-205ENST00000587173 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
VAT1-205ENST00000587173 AOC3Q16853 763 aa20.5■□□□□ 0.87
VAT1-205ENST00000587173 TRIM35Q9UPQ4 493 aa20.5■□□□□ 0.87
VAT1-205ENST00000587173 CAPN15O75808 1086 aa20.49■□□□□ 0.87
VAT1-205ENST00000587173 SCNN1DP51172 638 aa20.49■□□□□ 0.87
VAT1-205ENST00000587173 TRMT112Q9UI30 125 aaKnown RBP20.49■□□□□ 0.87
VAT1-205ENST00000587173 EPS15P42566 896 aa20.48■□□□□ 0.87
VAT1-205ENST00000587173 HDGFL1Q5TGJ6 251 aa20.48■□□□□ 0.87
VAT1-205ENST00000587173 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
VAT1-205ENST00000587173 SH3TC1Q8TE82 1336 aa20.48■□□□□ 0.87
VAT1-205ENST00000587173 BBOX1O75936 387 aa20.47■□□□□ 0.87
VAT1-205ENST00000587173 VEGFBP49765 207 aa20.47■□□□□ 0.87
VAT1-205ENST00000587173 SUPT20HQ8NEM7 779 aa20.47■□□□□ 0.87
VAT1-205ENST00000587173 VPS33BQ9H267 617 aa20.47■□□□□ 0.87
VAT1-205ENST00000587173 ADAMTS8Q9UP79 889 aa20.47■□□□□ 0.87
VAT1-205ENST00000587173 LTBP1Q14766 1721 aa20.47■□□□□ 0.87
VAT1-205ENST00000587173 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
VAT1-205ENST00000587173 DDX46Q7L014 1031 aaKnown RBP20.46■□□□□ 0.87
VAT1-205ENST00000587173 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
VAT1-205ENST00000587173 RTFDC1Q9BY42 306 aaPredicted RBP20.46■□□□□ 0.87
VAT1-205ENST00000587173 FOXN1O15353 648 aa20.45■□□□□ 0.86
VAT1-205ENST00000587173 HOXB7P09629 217 aa20.45■□□□□ 0.86
VAT1-205ENST00000587173 GRAPQ13588 217 aa20.45■□□□□ 0.86
VAT1-205ENST00000587173 SP8Q8IXZ3 490 aa20.45■□□□□ 0.86
VAT1-205ENST00000587173 GRAPLQ8TC17 118 aaPredicted RBP20.45■□□□□ 0.86
VAT1-205ENST00000587173 RASSF10A6NK89 507 aa20.44■□□□□ 0.86
VAT1-205ENST00000587173 USP50Q70EL3 339 aaPredicted RBP20.44■□□□□ 0.86
VAT1-205ENST00000587173 MPNDQ8N594 471 aa20.44■□□□□ 0.86
VAT1-205ENST00000587173 PLBD2Q8NHP8 589 aa20.44■□□□□ 0.86
VAT1-205ENST00000587173 ZNRF3Q9ULT6 936 aa20.44■□□□□ 0.86
VAT1-205ENST00000587173 ABT1Q9ULW3 272 aaKnown RBP20.44■□□□□ 0.86
VAT1-205ENST00000587173 ANKRD36CQ5JPF3 1778 aa20.44■□□□□ 0.86
VAT1-205ENST00000587173 DEFB115Q30KQ5 88 aa20.43■□□□□ 0.86
VAT1-205ENST00000587173 AIDAQ96BJ3 306 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms