RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 TSPYL4Q9UJ04 414 aa20.07■□□□□ 0.8
MBD1-215ENST00000586884 EPHX2P34913 555 aa20.06■□□□□ 0.8
MBD1-215ENST00000586884 SUSD4Q5VX71 490 aa20.06■□□□□ 0.8
MBD1-215ENST00000586884 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
MBD1-215ENST00000586884 PNMA8AQ86V59 439 aaPredicted RBP20.06■□□□□ 0.8
MBD1-215ENST00000586884 TNS4Q8IZW8 715 aa20.06■□□□□ 0.8
MBD1-215ENST00000586884 BABAM1Q9NWV8 329 aa20.06■□□□□ 0.8
MBD1-215ENST00000586884 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
MBD1-215ENST00000586884 NUP98P52948 1817 aa20.06■□□□□ 0.8
MBD1-215ENST00000586884 NTSR2O95665 410 aa20.05■□□□□ 0.8
MBD1-215ENST00000586884 PARP10Q53GL7 1025 aa20.05■□□□□ 0.8
MBD1-215ENST00000586884 EAPPQ56P03 285 aaPredicted RBP20.05■□□□□ 0.8
MBD1-215ENST00000586884 CRAMP1Q96RY5 1269 aa20.05■□□□□ 0.8
MBD1-215ENST00000586884 RALBP1Q15311 655 aa20.04■□□□□ 0.8
MBD1-215ENST00000586884 PPP1R42Q7Z4L9 355 aa20.04■□□□□ 0.8
MBD1-215ENST00000586884 RBM17Q96I25 401 aaKnown RBP20.04■□□□□ 0.8
MBD1-215ENST00000586884 CNTNAP1P78357 1384 aa20.04■□□□□ 0.8
MBD1-215ENST00000586884 RNF123Q5XPI4 1314 aa20.03■□□□□ 0.8
MBD1-215ENST00000586884 ITGBL1O95965 494 aaPredicted RBP20.03■□□□□ 0.8
MBD1-215ENST00000586884 RIPK4P57078 832 aa20.03■□□□□ 0.8
MBD1-215ENST00000586884 LMOD3Q0VAK6 560 aa20.03■□□□□ 0.8
MBD1-215ENST00000586884 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
MBD1-215ENST00000586884 CLEC11AQ9Y240 323 aa20.03■□□□□ 0.8
MBD1-215ENST00000586884 TMEM88BA6NKF7 163 aa20.02■□□□□ 0.8
MBD1-215ENST00000586884 PPEF1O14829 653 aaPredicted RBP20.02■□□□□ 0.8
MBD1-215ENST00000586884 EIF6P56537 245 aaKnown RBP20.02■□□□□ 0.8
MBD1-215ENST00000586884 ADAMTSL1Q8N6G6 1762 aa20.02■□□□□ 0.8
MBD1-215ENST00000586884 PDIA6Q15084 440 aa20.01■□□□□ 0.79
MBD1-215ENST00000586884 NLRP3Q96P20 1036 aa20.01■□□□□ 0.79
MBD1-215ENST00000586884 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
MBD1-215ENST00000586884 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
MBD1-215ENST00000586884 LARGE2Q8N3Y3 721 aa20■□□□□ 0.79
MBD1-215ENST00000586884 UTP14AQ9BVJ6 771 aaKnown RBP20■□□□□ 0.79
MBD1-215ENST00000586884 TMX4Q9H1E5 349 aaPredicted RBP20■□□□□ 0.79
MBD1-215ENST00000586884 SLC10A5Q5PT55 438 aa19.99■□□□□ 0.79
MBD1-215ENST00000586884 C3orf67Q6ZVT6 689 aa19.99■□□□□ 0.79
MBD1-215ENST00000586884 CNTROBQ8N137 903 aa19.99■□□□□ 0.79
MBD1-215ENST00000586884 GJA3Q9Y6H8 435 aa19.99■□□□□ 0.79
MBD1-215ENST00000586884 COL4A5P29400 1685 aa19.99■□□□□ 0.79
MBD1-215ENST00000586884 LMOD1P29536 600 aaPredicted RBP19.98■□□□□ 0.79
MBD1-215ENST00000586884 HSP90AB3PQ58FF7 597 aa19.98■□□□□ 0.79
MBD1-215ENST00000586884 MAP1SQ66K74 1059 aaPredicted RBP19.98■□□□□ 0.79
MBD1-215ENST00000586884 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
MBD1-215ENST00000586884 VPS33BQ9H267 617 aa19.97■□□□□ 0.79
MBD1-215ENST00000586884 ATP6V0A2Q9Y487 856 aa19.97■□□□□ 0.79
MBD1-215ENST00000586884 TCERG1O14776 1098 aaKnown RBP19.96■□□□□ 0.79
MBD1-215ENST00000586884 CAPN15O75808 1086 aa19.96■□□□□ 0.79
MBD1-215ENST00000586884 ANXA1P04083 346 aa19.96■□□□□ 0.79
MBD1-215ENST00000586884 VEGFBP49765 207 aa19.96■□□□□ 0.79
MBD1-215ENST00000586884 NIM1KQ8IY84 436 aa19.96■□□□□ 0.79
MBD1-215ENST00000586884 SCNN1DP51172 638 aa19.95■□□□□ 0.78
MBD1-215ENST00000586884 COPS6Q7L5N1 327 aa19.95■□□□□ 0.78
MBD1-215ENST00000586884 ABCC4O15439 1325 aa19.95■□□□□ 0.78
MBD1-215ENST00000586884 RASSF10A6NK89 507 aa19.94■□□□□ 0.78
MBD1-215ENST00000586884 PPIP5K2O43314 1243 aa19.94■□□□□ 0.78
MBD1-215ENST00000586884 SLC51AQ86UW1 340 aa19.94■□□□□ 0.78
MBD1-215ENST00000586884 NLRP10Q86W26 655 aa19.94■□□□□ 0.78
MBD1-215ENST00000586884 SUPT20HQ8NEM7 779 aa19.94■□□□□ 0.78
MBD1-215ENST00000586884 XAGE3Q8WTP9 111 aa19.94■□□□□ 0.78
MBD1-215ENST00000586884 MYBBP1AQ9BQG0 1328 aaKnown RBP19.94■□□□□ 0.78
MBD1-215ENST00000586884 FOXN1O15353 648 aa19.93■□□□□ 0.78
MBD1-215ENST00000586884 BBOX1O75936 387 aa19.93■□□□□ 0.78
MBD1-215ENST00000586884 USP50Q70EL3 339 aaPredicted RBP19.93■□□□□ 0.78
MBD1-215ENST00000586884 AIDAQ96BJ3 306 aa19.93■□□□□ 0.78
MBD1-215ENST00000586884 RTFDC1Q9BY42 306 aaPredicted RBP19.93■□□□□ 0.78
MBD1-215ENST00000586884 DDX21Q9NR30 783 aaKnown RBP eCLIP19.93■□□□□ 0.78
MBD1-215ENST00000586884 CHL1O00533 1208 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 EPS15P42566 896 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
MBD1-215ENST00000586884 TCIRG1Q13488 830 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 AOC3Q16853 763 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 DEFB115Q30KQ5 88 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 NECTIN2Q92692 538 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 PRDM10Q9NQV6 1147 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 LTBP1Q14766 1721 aa19.92■□□□□ 0.78
MBD1-215ENST00000586884 SP8Q8IXZ3 490 aa19.91■□□□□ 0.78
MBD1-215ENST00000586884 TRMT112Q9UI30 125 aaKnown RBP19.91■□□□□ 0.78
MBD1-215ENST00000586884 ZNRF3Q9ULT6 936 aa19.91■□□□□ 0.78
MBD1-215ENST00000586884 SH3TC1Q8TE82 1336 aa19.91■□□□□ 0.78
MBD1-215ENST00000586884 ANKRD36CQ5JPF3 1778 aa19.9■□□□□ 0.78
MBD1-215ENST00000586884 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
MBD1-215ENST00000586884 CTCFP49711 727 aaPredicted RBP19.9■□□□□ 0.78
MBD1-215ENST00000586884 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
MBD1-215ENST00000586884 DPP8Q6V1X1 898 aaPredicted RBP19.9■□□□□ 0.78
MBD1-215ENST00000586884 DDX46Q7L014 1031 aaKnown RBP19.9■□□□□ 0.78
MBD1-215ENST00000586884 CCDC146Q8IYE0 955 aa19.9■□□□□ 0.78
MBD1-215ENST00000586884 RUNDC1Q96C34 613 aa19.9■□□□□ 0.78
MBD1-215ENST00000586884 ABT1Q9ULW3 272 aaKnown RBP19.9■□□□□ 0.78
MBD1-215ENST00000586884 HOXB7P09629 217 aa19.89■□□□□ 0.77
MBD1-215ENST00000586884 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
MBD1-215ENST00000586884 MPNDQ8N594 471 aa19.89■□□□□ 0.77
MBD1-215ENST00000586884 ADARB2Q9NS39 739 aaKnown RBP19.89■□□□□ 0.77
MBD1-215ENST00000586884 WBP1LQ9NX94 342 aa19.89■□□□□ 0.77
MBD1-215ENST00000586884 GPRC5DQ9NZD1 345 aa19.89■□□□□ 0.77
MBD1-215ENST00000586884 TRIM35Q9UPQ4 493 aa19.89■□□□□ 0.77
MBD1-215ENST00000586884 CXCL9Q07325 125 aa19.88■□□□□ 0.77
MBD1-215ENST00000586884 GRAPQ13588 217 aa19.88■□□□□ 0.77
MBD1-215ENST00000586884 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
MBD1-215ENST00000586884 HDGFL1Q5TGJ6 251 aa19.88■□□□□ 0.77
MBD1-215ENST00000586884 TMC4Q7Z404 712 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms