RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-206ENST00000585460 PPP1R42Q7Z4L9 355 aa21.5■■□□□ 1.03
PRKAR1A-206ENST00000585460 SLC51AQ86UW1 340 aa21.5■■□□□ 1.03
PRKAR1A-206ENST00000585460 RBM17Q96I25 401 aaKnown RBP21.5■■□□□ 1.03
PRKAR1A-206ENST00000585460 HACL1Q9UJ83 578 aa21.5■■□□□ 1.03
PRKAR1A-206ENST00000585460 PASKQ96RG2 1323 aa21.5■■□□□ 1.03
PRKAR1A-206ENST00000585460 SNED1Q8TER0 1413 aa21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 HSPA1AP0DMV8 641 aaKnown RBP21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 HSPA1BP0DMV9 641 aaKnown RBP21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 PARP10Q53GL7 1025 aa21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 EAPPQ56P03 285 aaPredicted RBP21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 JDP2Q8WYK2 163 aa21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
PRKAR1A-206ENST00000585460 IBTKQ9P2D0 1353 aaPredicted RBP21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 TCERG1O14776 1098 aaKnown RBP21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 EPHX2P34913 555 aa21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 GPC2Q8N158 579 aa21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 UTP14AQ9BVJ6 771 aaKnown RBP21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 MKRN1Q9UHC7 482 aaKnown RBP21.48■■□□□ 1.03
PRKAR1A-206ENST00000585460 CHL1O00533 1208 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 NEUROD2Q15784 382 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 GRIPAP1Q4V328 841 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 COPS6Q7L5N1 327 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 CCDC146Q8IYE0 955 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 NECTIN2Q92692 538 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 CLEC11AQ9Y240 323 aa21.47■■□□□ 1.03
PRKAR1A-206ENST00000585460 KDM3BQ7LBC6 1761 aa21.46■■□□□ 1.03
PRKAR1A-206ENST00000585460 RNF123Q5XPI4 1314 aa21.46■■□□□ 1.03
PRKAR1A-206ENST00000585460 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
PRKAR1A-206ENST00000585460 PCNTO95613 3336 aa21.45■■□□□ 1.03
PRKAR1A-206ENST00000585460 PPEF1O14829 653 aaPredicted RBP21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 PNMA8AQ86V59 439 aaPredicted RBP21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 XAGE3Q8WTP9 111 aa21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 TRIM35Q9UPQ4 493 aa21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 ARFGEF2Q9Y6D5 1785 aa21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
PRKAR1A-206ENST00000585460 EIF6P56537 245 aaKnown RBP21.44■■□□□ 1.02
PRKAR1A-206ENST00000585460 KRT24Q2M2I5 525 aa21.44■■□□□ 1.02
PRKAR1A-206ENST00000585460 LARGE2Q8N3Y3 721 aa21.44■■□□□ 1.02
PRKAR1A-206ENST00000585460 GJA3Q9Y6H8 435 aa21.44■■□□□ 1.02
PRKAR1A-206ENST00000585460 MAP1SQ66K74 1059 aaPredicted RBP21.43■■□□□ 1.02
PRKAR1A-206ENST00000585460 NLRP10Q86W26 655 aa21.43■■□□□ 1.02
PRKAR1A-206ENST00000585460 CNTROBQ8N137 903 aa21.43■■□□□ 1.02
PRKAR1A-206ENST00000585460 ATP6V0A2Q9Y487 856 aa21.43■■□□□ 1.02
PRKAR1A-206ENST00000585460 MYBBP1AQ9BQG0 1328 aaKnown RBP21.43■■□□□ 1.02
PRKAR1A-206ENST00000585460 LAMB4A4D0S4 1761 aa21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 TMEM88BA6NKF7 163 aa21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 TCIRG1Q13488 830 aa21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 TNS4Q8IZW8 715 aa21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 RUNDC1Q96C34 613 aa21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 DDX21Q9NR30 783 aaKnown RBP eCLIP21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 ADAMTS8Q9UP79 889 aa21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 LAS1LQ9Y4W2 734 aaKnown RBP21.42■■□□□ 1.02
PRKAR1A-206ENST00000585460 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
PRKAR1A-206ENST00000585460 HCLS1P14317 486 aaPredicted RBP21.41■■□□□ 1.02
PRKAR1A-206ENST00000585460 HSP90AB3PQ58FF7 597 aa21.41■■□□□ 1.02
PRKAR1A-206ENST00000585460 CNTNAP1P78357 1384 aa21.4■■□□□ 1.02
PRKAR1A-206ENST00000585460 BBOX1O75936 387 aa21.4■■□□□ 1.02
PRKAR1A-206ENST00000585460 EPS15P42566 896 aa21.4■■□□□ 1.02
PRKAR1A-206ENST00000585460 COL4A5P29400 1685 aa21.4■■□□□ 1.02
PRKAR1A-206ENST00000585460 NUP98P52948 1817 aa21.39■■□□□ 1.02
PRKAR1A-206ENST00000585460 ABCC4O15439 1325 aa21.39■■□□□ 1.01
PRKAR1A-206ENST00000585460 VEGFBP49765 207 aa21.39■■□□□ 1.01
PRKAR1A-206ENST00000585460 SCNN1DP51172 638 aa21.39■■□□□ 1.01
PRKAR1A-206ENST00000585460 TMX4Q9H1E5 349 aaPredicted RBP21.39■■□□□ 1.01
PRKAR1A-206ENST00000585460 TRMT112Q9UI30 125 aaKnown RBP21.39■■□□□ 1.01
PRKAR1A-206ENST00000585460 PPIP5K2O43314 1243 aa21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 AOC3Q16853 763 aa21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 SP8Q8IXZ3 490 aa21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 NIM1KQ8IY84 436 aa21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 RTFDC1Q9BY42 306 aaPredicted RBP21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
PRKAR1A-206ENST00000585460 LMOD1P29536 600 aaPredicted RBP21.37■■□□□ 1.01
PRKAR1A-206ENST00000585460 SCN4AP35499 1836 aa21.36■■□□□ 1.01
PRKAR1A-206ENST00000585460 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
PRKAR1A-206ENST00000585460 SH3TC1Q8TE82 1336 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 CAPN15O75808 1086 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 CXCL9Q07325 125 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 DDX46Q7L014 1031 aaKnown RBP21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 MPNDQ8N594 471 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 SUPT20HQ8NEM7 779 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 PLBD2Q8NHP8 589 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 ZNRF3Q9ULT6 936 aa21.35■■□□□ 1.01
PRKAR1A-206ENST00000585460 FOXN1O15353 648 aa21.34■■□□□ 1.01
PRKAR1A-206ENST00000585460 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.018e-7■■□□□ 13.2
PRKAR1A-206ENST00000585460 DEFB115Q30KQ5 88 aa21.34■■□□□ 1.01
PRKAR1A-206ENST00000585460 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
PRKAR1A-206ENST00000585460 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
PRKAR1A-206ENST00000585460 HOXB7P09629 217 aa21.33■■□□□ 1.01
PRKAR1A-206ENST00000585460 GRAPQ13588 217 aa21.33■■□□□ 1.01
PRKAR1A-206ENST00000585460 USP50Q70EL3 339 aaPredicted RBP21.33■■□□□ 1.01
PRKAR1A-206ENST00000585460 GRAPLQ8TC17 118 aaPredicted RBP21.33■■□□□ 1.01
PRKAR1A-206ENST00000585460 ISCA1Q9BUE6 129 aa21.33■■□□□ 1.01
PRKAR1A-206ENST00000585460 DBF4Q9UBU7 674 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms