RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 POTEJP0CG39 1038 aa19.12■□□□□ 0.65
CDC42EP4-208ENST00000582303 GPTP24298 496 aa19.12■□□□□ 0.65
CDC42EP4-208ENST00000582303 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
CDC42EP4-208ENST00000582303 CRAMP1Q96RY5 1269 aa19.12■□□□□ 0.65
CDC42EP4-208ENST00000582303 ABCC12Q96J65 1359 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 RNF123Q5XPI4 1314 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 PASKQ96RG2 1323 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 ZNF541Q9H0D2 1346 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 TMEM88BA6NKF7 163 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 LMOD1P29536 600 aaPredicted RBP19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 RIPK4P57078 832 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 ZNF34Q8IZ26 560 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 NLRP3Q96P20 1036 aa19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 THUMPD2Q9BTF0 503 aaKnown RBP19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
CDC42EP4-208ENST00000582303 SCN4AP35499 1836 aa19.1■□□□□ 0.65
CDC42EP4-208ENST00000582303 HSP90AB3PQ58FF7 597 aa19.1■□□□□ 0.65
CDC42EP4-208ENST00000582303 OLFM4Q6UX06 510 aa19.1■□□□□ 0.65
CDC42EP4-208ENST00000582303 UBN2Q6ZU65 1347 aa19.09■□□□□ 0.65
CDC42EP4-208ENST00000582303 PPEF1O14829 653 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP4-208ENST00000582303 SUSD4Q5VX71 490 aa19.09■□□□□ 0.65
CDC42EP4-208ENST00000582303 LARGE2Q8N3Y3 721 aa19.09■□□□□ 0.65
CDC42EP4-208ENST00000582303 VPS33BQ9H267 617 aa19.09■□□□□ 0.65
CDC42EP4-208ENST00000582303 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
CDC42EP4-208ENST00000582303 CNTNAP1P78357 1384 aa19.08■□□□□ 0.65
CDC42EP4-208ENST00000582303 CACNA1SQ13698 1873 aa19.08■□□□□ 0.65
CDC42EP4-208ENST00000582303 NTSR2O95665 410 aa19.08■□□□□ 0.64
CDC42EP4-208ENST00000582303 EIF2S2P20042 333 aaKnown RBP19.08■□□□□ 0.64
CDC42EP4-208ENST00000582303 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.64
CDC42EP4-208ENST00000582303 ITGBL1O95965 494 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP4-208ENST00000582303 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
CDC42EP4-208ENST00000582303 AIDAQ96BJ3 306 aa19.07■□□□□ 0.64
CDC42EP4-208ENST00000582303 NIM1KQ8IY84 436 aa19.06■□□□□ 0.64
CDC42EP4-208ENST00000582303 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
CDC42EP4-208ENST00000582303 GJA3Q9Y6H8 435 aa19.06■□□□□ 0.64
CDC42EP4-208ENST00000582303 TMPOP42166 694 aaKnown RBP19.05■□□□□ 0.64
CDC42EP4-208ENST00000582303 SLC10A5Q5PT55 438 aa19.05■□□□□ 0.64
CDC42EP4-208ENST00000582303 SNED1Q8TER0 1413 aa19.05■□□□□ 0.64
CDC42EP4-208ENST00000582303 BBOX1O75936 387 aa19.04■□□□□ 0.64
CDC42EP4-208ENST00000582303 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
CDC42EP4-208ENST00000582303 PPIP5K2O43314 1243 aa19.03■□□□□ 0.64
CDC42EP4-208ENST00000582303 PDIA6Q15084 440 aa19.03■□□□□ 0.64
CDC42EP4-208ENST00000582303 USP50Q70EL3 339 aaPredicted RBP19.03■□□□□ 0.64
CDC42EP4-208ENST00000582303 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.64
CDC42EP4-208ENST00000582303 TCERG1O14776 1098 aaKnown RBP19.02■□□□□ 0.64
CDC42EP4-208ENST00000582303 MAP1SQ66K74 1059 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP4-208ENST00000582303 LRP10Q7Z4F1 713 aa19.02■□□□□ 0.64
CDC42EP4-208ENST00000582303 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 RASSF10A6NK89 507 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 CAPN15O75808 1086 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 CTCFP49711 727 aaPredicted RBP19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 DEFB115Q30KQ5 88 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 DDX46Q7L014 1031 aaKnown RBP19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 COPS6Q7L5N1 327 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 TMC4Q7Z404 712 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 PRDM10Q9NQV6 1147 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 DDX21Q9NR30 783 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 NUP98P52948 1817 aa19.01■□□□□ 0.63
CDC42EP4-208ENST00000582303 VEGFBP49765 207 aa19■□□□□ 0.63
CDC42EP4-208ENST00000582303 AIMP1Q12904 312 aaKnown RBP19■□□□□ 0.63
CDC42EP4-208ENST00000582303 DPP8Q6V1X1 898 aaPredicted RBP19■□□□□ 0.63
CDC42EP4-208ENST00000582303 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
CDC42EP4-208ENST00000582303 ZNRF3Q9ULT6 936 aa19■□□□□ 0.63
CDC42EP4-208ENST00000582303 ABT1Q9ULW3 272 aaKnown RBP19■□□□□ 0.63
CDC42EP4-208ENST00000582303 SH3TC1Q8TE82 1336 aa19■□□□□ 0.63
CDC42EP4-208ENST00000582303 HOXB7P09629 217 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 SCNN1DP51172 638 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 MAP2K1Q02750 393 aaPredicted RBP18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 TCIRG1Q13488 830 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 NLRP10Q86W26 655 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 SP8Q8IXZ3 490 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 XAGE3Q8WTP9 111 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 RTFDC1Q9BY42 306 aaPredicted RBP18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 ABCC4O15439 1325 aa18.99■□□□□ 0.63
CDC42EP4-208ENST00000582303 CHL1O00533 1208 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 AOC3Q16853 763 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 MPNDQ8N594 471 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 CDHR2Q9BYE9 1310 aa18.98■□□□□ 0.63
CDC42EP4-208ENST00000582303 FOXN1O15353 648 aa18.97■□□□□ 0.63
CDC42EP4-208ENST00000582303 ANXA1P04083 346 aa18.97■□□□□ 0.63
CDC42EP4-208ENST00000582303 EPS15P42566 896 aa18.97■□□□□ 0.63
CDC42EP4-208ENST00000582303 ECE1P42892 770 aa18.97■□□□□ 0.63
CDC42EP4-208ENST00000582303 GRAPQ13588 217 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 TNIP1Q15025 636 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 HDGFL1Q5TGJ6 251 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 GRAPLQ8TC17 118 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 NECTIN2Q92692 538 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 WBP1LQ9NX94 342 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 GPRC5DQ9NZD1 345 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 DBF4Q9UBU7 674 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 LAS1LQ9Y4W2 734 aaKnown RBP18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
CDC42EP4-208ENST00000582303 HCLS1P14317 486 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP4-208ENST00000582303 HSP90B1P14625 803 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms