RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 HACL1Q9UJ83 578 aa25.67■■□□□ 1.7
SPECC1-213ENST00000579688 COL4A5P29400 1685 aa25.67■■□□□ 1.7
SPECC1-213ENST00000579688 PASKQ96RG2 1323 aa25.66■■□□□ 1.7
SPECC1-213ENST00000579688 NTSR2O95665 410 aa25.66■■□□□ 1.7
SPECC1-213ENST00000579688 CC2D2BQ6DHV5 1058 aa25.66■■□□□ 1.7
SPECC1-213ENST00000579688 MKRN1Q9UHC7 482 aaKnown RBP25.66■■□□□ 1.7
SPECC1-213ENST00000579688 EAPPQ56P03 285 aaPredicted RBP25.65■■□□□ 1.7
SPECC1-213ENST00000579688 LRP10Q7Z4F1 713 aa25.65■■□□□ 1.7
SPECC1-213ENST00000579688 EPHX2P34913 555 aa25.64■■□□□ 1.7
SPECC1-213ENST00000579688 RIPK4P57078 832 aa25.64■■□□□ 1.7
SPECC1-213ENST00000579688 RNF123Q5XPI4 1314 aa25.63■■□□□ 1.69
SPECC1-213ENST00000579688 PDIA6Q15084 440 aa25.63■■□□□ 1.69
SPECC1-213ENST00000579688 GPC2Q8N158 579 aa25.63■■□□□ 1.69
SPECC1-213ENST00000579688 JDP2Q8WYK2 163 aa25.63■■□□□ 1.69
SPECC1-213ENST00000579688 CRAMP1Q96RY5 1269 aa25.63■■□□□ 1.69
SPECC1-213ENST00000579688 LAMB2P55268 1798 aa25.63■■□□□ 1.69
SPECC1-213ENST00000579688 EIF2S2P20042 333 aaKnown RBP25.62■■□□□ 1.69
SPECC1-213ENST00000579688 RALBP1Q15311 655 aa25.62■■□□□ 1.69
SPECC1-213ENST00000579688 PARP10Q53GL7 1025 aa25.62■■□□□ 1.69
SPECC1-213ENST00000579688 C3orf67Q6ZVT6 689 aa25.62■■□□□ 1.69
SPECC1-213ENST00000579688 PPP1R42Q7Z4L9 355 aa25.62■■□□□ 1.69
SPECC1-213ENST00000579688 TNS4Q8IZW8 715 aa25.62■■□□□ 1.69
SPECC1-213ENST00000579688 RBM17Q96I25 401 aaKnown RBP25.62■■□□□ 1.69
SPECC1-213ENST00000579688 CNTNAP1P78357 1384 aa25.61■■□□□ 1.69
SPECC1-213ENST00000579688 LTBP1Q14766 1721 aa25.61■■□□□ 1.69
SPECC1-213ENST00000579688 ITGBL1O95965 494 aaPredicted RBP25.61■■□□□ 1.69
SPECC1-213ENST00000579688 GRIPAP1Q4V328 841 aa25.61■■□□□ 1.69
SPECC1-213ENST00000579688 SLC51AQ86UW1 340 aa25.61■■□□□ 1.69
SPECC1-213ENST00000579688 BABAM1Q9NWV8 329 aa25.61■■□□□ 1.69
SPECC1-213ENST00000579688 PPEF1O14829 653 aaPredicted RBP25.6■■□□□ 1.69
SPECC1-213ENST00000579688 TMPOP42166 694 aaKnown RBP25.6■■□□□ 1.69
SPECC1-213ENST00000579688 PROSER3Q2NL68 480 aa25.6■■□□□ 1.69
SPECC1-213ENST00000579688 PNMA8AQ86V59 439 aaPredicted RBP25.6■■□□□ 1.69
SPECC1-213ENST00000579688 CLEC11AQ9Y240 323 aa25.6■■□□□ 1.69
SPECC1-213ENST00000579688 ANXA1P04083 346 aa25.59■■□□□ 1.69
SPECC1-213ENST00000579688 LMOD3Q0VAK6 560 aa25.59■■□□□ 1.69
SPECC1-213ENST00000579688 TMEM88BA6NKF7 163 aa25.58■■□□□ 1.69
SPECC1-213ENST00000579688 EIF6P56537 245 aaKnown RBP25.58■■□□□ 1.69
SPECC1-213ENST00000579688 TCERG1O14776 1098 aaKnown RBP25.57■■□□□ 1.68
SPECC1-213ENST00000579688 LARGE2Q8N3Y3 721 aa25.57■■□□□ 1.68
SPECC1-213ENST00000579688 NLRP3Q96P20 1036 aa25.57■■□□□ 1.68
SPECC1-213ENST00000579688 UTP14AQ9BVJ6 771 aaKnown RBP25.57■■□□□ 1.68
SPECC1-213ENST00000579688 GJA3Q9Y6H8 435 aa25.57■■□□□ 1.68
SPECC1-213ENST00000579688 SLC10A5Q5PT55 438 aa25.56■■□□□ 1.68
SPECC1-213ENST00000579688 MAP1SQ66K74 1059 aaPredicted RBP25.55■■□□□ 1.68
SPECC1-213ENST00000579688 CNTROBQ8N137 903 aa25.55■■□□□ 1.68
SPECC1-213ENST00000579688 NECTIN2Q92692 538 aa25.54■■□□□ 1.68
SPECC1-213ENST00000579688 CAPN15O75808 1086 aa25.53■■□□□ 1.68
SPECC1-213ENST00000579688 LMOD1P29536 600 aaPredicted RBP25.53■■□□□ 1.68
SPECC1-213ENST00000579688 COPS6Q7L5N1 327 aa25.53■■□□□ 1.68
SPECC1-213ENST00000579688 ATP6V0A2Q9Y487 856 aa25.53■■□□□ 1.68
SPECC1-213ENST00000579688 ABCC4O15439 1325 aa25.53■■□□□ 1.68
SPECC1-213ENST00000579688 MYBBP1AQ9BQG0 1328 aaKnown RBP25.53■■□□□ 1.68
SPECC1-213ENST00000579688 TAF1P21675 1872 aa25.53■■□□□ 1.68
SPECC1-213ENST00000579688 SCNN1DP51172 638 aa25.52■■□□□ 1.68
SPECC1-213ENST00000579688 AIMP1Q12904 312 aaKnown RBP25.52■■□□□ 1.68
SPECC1-213ENST00000579688 HSP90AB3PQ58FF7 597 aa25.52■■□□□ 1.68
SPECC1-213ENST00000579688 NLRP10Q86W26 655 aa25.52■■□□□ 1.68
SPECC1-213ENST00000579688 NIM1KQ8IY84 436 aa25.52■■□□□ 1.68
SPECC1-213ENST00000579688 CCDC146Q8IYE0 955 aa25.52■■□□□ 1.68
SPECC1-213ENST00000579688 XAGE3Q8WTP9 111 aa25.52■■□□□ 1.68
SPECC1-213ENST00000579688 PPIP5K2O43314 1243 aa25.51■■□□□ 1.67
SPECC1-213ENST00000579688 VEGFBP49765 207 aa25.51■■□□□ 1.67
SPECC1-213ENST00000579688 NEUROD2Q15784 382 aa25.51■■□□□ 1.67
SPECC1-213ENST00000579688 KRT24Q2M2I5 525 aa25.51■■□□□ 1.67
SPECC1-213ENST00000579688 TMX4Q9H1E5 349 aaPredicted RBP25.51■■□□□ 1.67
SPECC1-213ENST00000579688 DDX21Q9NR30 783 aaKnown RBP eCLIP25.51■■□□□ 1.67
SPECC1-213ENST00000579688 TRPM7Q96QT4 1865 aa25.51■■□□□ 1.67
SPECC1-213ENST00000579688 CHL1O00533 1208 aa25.5■■□□□ 1.67
SPECC1-213ENST00000579688 AOC3Q16853 763 aa25.5■■□□□ 1.67
SPECC1-213ENST00000579688 DDX60Q8IY21 1712 aaKnown RBP25.5■■□□□ 1.67
SPECC1-213ENST00000579688 FOXN1O15353 648 aa25.49■■□□□ 1.67
SPECC1-213ENST00000579688 EPS15P42566 896 aa25.49■■□□□ 1.67
SPECC1-213ENST00000579688 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
SPECC1-213ENST00000579688 HCLS1P14317 486 aaPredicted RBP25.48■■□□□ 1.67
SPECC1-213ENST00000579688 TCIRG1Q13488 830 aa25.48■■□□□ 1.67
SPECC1-213ENST00000579688 RTFDC1Q9BY42 306 aaPredicted RBP25.48■■□□□ 1.67
SPECC1-213ENST00000579688 VPS33BQ9H267 617 aa25.48■■□□□ 1.67
SPECC1-213ENST00000579688 TRIM35Q9UPQ4 493 aa25.48■■□□□ 1.67
SPECC1-213ENST00000579688 LRRC37AA6NMS7 1700 aa25.47■■□□□ 1.67
SPECC1-213ENST00000579688 RASSF10A6NK89 507 aa25.47■■□□□ 1.67
SPECC1-213ENST00000579688 RUNDC1Q96C34 613 aa25.47■■□□□ 1.67
SPECC1-213ENST00000579688 CHPF2Q9P2E5 772 aa25.47■■□□□ 1.67
SPECC1-213ENST00000579688 LAS1LQ9Y4W2 734 aaKnown RBP25.47■■□□□ 1.67
SPECC1-213ENST00000579688 SH3TC1Q8TE82 1336 aa25.46■■□□□ 1.67
SPECC1-213ENST00000579688 BBOX1O75936 387 aa25.46■■□□□ 1.67
SPECC1-213ENST00000579688 SUPT20HQ8NEM7 779 aa25.46■■□□□ 1.67
SPECC1-213ENST00000579688 TRMT112Q9UI30 125 aaKnown RBP25.46■■□□□ 1.67
SPECC1-213ENST00000579688 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
SPECC1-213ENST00000579688 USP50Q70EL3 339 aaPredicted RBP25.45■■□□□ 1.66
SPECC1-213ENST00000579688 SP8Q8IXZ3 490 aa25.45■■□□□ 1.66
SPECC1-213ENST00000579688 DEFB115Q30KQ5 88 aa25.44■■□□□ 1.66
SPECC1-213ENST00000579688 DPP8Q6V1X1 898 aaPredicted RBP25.44■■□□□ 1.66
SPECC1-213ENST00000579688 AIDAQ96BJ3 306 aa25.44■■□□□ 1.66
SPECC1-213ENST00000579688 ZNRF3Q9ULT6 936 aa25.44■■□□□ 1.66
SPECC1-213ENST00000579688 ABT1Q9ULW3 272 aaKnown RBP25.44■■□□□ 1.66
SPECC1-213ENST00000579688 GRAPQ13588 217 aa25.43■■□□□ 1.66
SPECC1-213ENST00000579688 HDGFL1Q5TGJ6 251 aa25.43■■□□□ 1.66
SPECC1-213ENST00000579688 DDX46Q7L014 1031 aaKnown RBP25.43■■□□□ 1.66
SPECC1-213ENST00000579688 MPNDQ8N594 471 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms