RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
CSNK1D-210ENST00000579308 MKRN1Q9UHC7 482 aaKnown RBP14.06□□□□□ -0.16
CSNK1D-210ENST00000579308 ARFGEF2Q9Y6D5 1785 aa14.06□□□□□ -0.16
CSNK1D-210ENST00000579308 RIC1Q4ADV7 1423 aa14.06□□□□□ -0.16
CSNK1D-210ENST00000579308 GRIPAP1Q4V328 841 aa14.05□□□□□ -0.16
CSNK1D-210ENST00000579308 SLC10A5Q5PT55 438 aa14.05□□□□□ -0.16
CSNK1D-210ENST00000579308 TNS4Q8IZW8 715 aa14.05□□□□□ -0.16
CSNK1D-210ENST00000579308 GPC2Q8N158 579 aa14.05□□□□□ -0.16
CSNK1D-210ENST00000579308 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
CSNK1D-210ENST00000579308 RIPK4P57078 832 aa14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 RBM17Q96I25 401 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 MAPK8IP3Q9UPT6 1336 aa14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 CNTNAP1P78357 1384 aa14.04□□□□□ -0.16
CSNK1D-210ENST00000579308 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
CSNK1D-210ENST00000579308 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
CSNK1D-210ENST00000579308 PARP10Q53GL7 1025 aa14.03□□□□□ -0.16
CSNK1D-210ENST00000579308 PPP1R42Q7Z4L9 355 aa14.03□□□□□ -0.16
CSNK1D-210ENST00000579308 JDP2Q8WYK2 163 aa14.03□□□□□ -0.16
CSNK1D-210ENST00000579308 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
CSNK1D-210ENST00000579308 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
CSNK1D-210ENST00000579308 RALBP1Q15311 655 aa14.02□□□□□ -0.17
CSNK1D-210ENST00000579308 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
CSNK1D-210ENST00000579308 KDM3BQ7LBC6 1761 aa14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 COL4A5P29400 1685 aa14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 EIF2S2P20042 333 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 VEGFBP49765 207 aa14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 EIF6P56537 245 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 MAP1SQ66K74 1059 aaPredicted RBP14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
CSNK1D-210ENST00000579308 SCN4AP35499 1836 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 ANXA1P04083 346 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 SCNN1DP51172 638 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 VPS33BQ9H267 617 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 LAMB4A4D0S4 1761 aa14□□□□□ -0.17
CSNK1D-210ENST00000579308 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 CHL1O00533 1208 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 FOXN1O15353 648 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 EPS15P42566 896 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 COPS6Q7L5N1 327 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 NLRP10Q86W26 655 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 RTFDC1Q9BY42 306 aaPredicted RBP13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 GJA3Q9Y6H8 435 aa13.99□□□□□ -0.17
CSNK1D-210ENST00000579308 CACNA1SQ13698 1873 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 BBOX1O75936 387 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 LMOD3Q0VAK6 560 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 XAGE3Q8WTP9 111 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 ADAMTSL1Q8N6G6 1762 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 DLG5Q8TDM6 1919 aa13.98□□□□□ -0.17
CSNK1D-210ENST00000579308 ABCC4O15439 1325 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 CAPN15O75808 1086 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 TCIRG1Q13488 830 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 SP8Q8IXZ3 490 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.176e-8■■□□□ 13.9
CSNK1D-210ENST00000579308 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 NUP98P52948 1817 aa13.97□□□□□ -0.17
CSNK1D-210ENST00000579308 PPIP5K2O43314 1243 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 AIMP1Q12904 312 aaKnown RBP13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 AOC3Q16853 763 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 KRT24Q2M2I5 525 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 USP50Q70EL3 339 aaPredicted RBP13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 NIM1KQ8IY84 436 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 NECTIN2Q92692 538 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 ZNRF3Q9ULT6 936 aa13.96□□□□□ -0.17
CSNK1D-210ENST00000579308 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
CSNK1D-210ENST00000579308 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSNK1D-210ENST00000579308 CXCL9Q07325 125 aa13.95□□□□□ -0.18
CSNK1D-210ENST00000579308 CST9Q5W186 159 aa13.95□□□□□ -0.18
CSNK1D-210ENST00000579308 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
CSNK1D-210ENST00000579308 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
CSNK1D-210ENST00000579308 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
CSNK1D-210ENST00000579308 RUNDC1Q96C34 613 aa13.94□□□□□ -0.18
CSNK1D-210ENST00000579308 TMX4Q9H1E5 349 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-210ENST00000579308 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-210ENST00000579308 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 WDR33Q9C0J8 1336 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 KIAA2012Q0VF49 1180 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 GRAPQ13588 217 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 NEUROD2Q15784 382 aa13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-210ENST00000579308 DDX46Q7L014 1031 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms