RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-208	ENST00000578218	EIF2S2	P20042	333 aa	Known RBP	32.78	■■■□□ 2.84
THRA-208	ENST00000578218	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.78	■■■□□ 2.84
THRA-208	ENST00000578218	HACL1	Q9UJ83	578 aa		32.78	■■■□□ 2.84
THRA-208	ENST00000578218	NTSR2	O95665	410 aa		32.77	■■■□□ 2.84
THRA-208	ENST00000578218	CC2D2B	Q6DHV5	1058 aa		32.77	■■■□□ 2.84
THRA-208	ENST00000578218	PPP1R42	Q7Z4L9	355 aa		32.77	■■■□□ 2.84
THRA-208	ENST00000578218	ZNF34	Q8IZ26	560 aa		32.77	■■■□□ 2.84
THRA-208	ENST00000578218	JDP2	Q8WYK2	163 aa		32.77	■■■□□ 2.84
THRA-208	ENST00000578218	RNF123	Q5XPI4	1314 aa		32.77	■■■□□ 2.84
THRA-208	ENST00000578218	RBM17	Q96I25	401 aa	Known RBP	32.76	■■■□□ 2.83
THRA-208	ENST00000578218	FZD9	O00144	591 aa		32.75	■■■□□ 2.83
THRA-208	ENST00000578218	PPEF1	O14829	653 aa	Predicted RBP	32.75	■■■□□ 2.83
THRA-208	ENST00000578218	PARP10	Q53GL7	1025 aa		32.75	■■■□□ 2.83
THRA-208	ENST00000578218	MKRN1	Q9UHC7	482 aa	Known RBP	32.75	■■■□□ 2.83
THRA-208	ENST00000578218	HOXA10	P31260	410 aa	Predicted RBP	32.74	■■■□□ 2.83
THRA-208	ENST00000578218	EPHX2	P34913	555 aa		32.74	■■■□□ 2.83
THRA-208	ENST00000578218	CLEC11A	Q9Y240	323 aa		32.74	■■■□□ 2.83
THRA-208	ENST00000578218	LAMB2	P55268	1798 aa		32.73	■■■□□ 2.83
THRA-208	ENST00000578218	COL4A5	P29400	1685 aa		32.73	■■■□□ 2.83
THRA-208	ENST00000578218	TMPO	P42166	694 aa	Known RBP	32.73	■■■□□ 2.83
THRA-208	ENST00000578218	BABAM1	Q9NWV8	329 aa		32.73	■■■□□ 2.83
THRA-208	ENST00000578218	GPC2	Q8N158	579 aa		32.72	■■■□□ 2.83
THRA-208	ENST00000578218	PASK	Q96RG2	1323 aa		32.72	■■■□□ 2.83
THRA-208	ENST00000578218	ANXA1	P04083	346 aa		32.71	■■■□□ 2.83
THRA-208	ENST00000578218	EIF6	P56537	245 aa	Known RBP	32.71	■■■□□ 2.83
THRA-208	ENST00000578218	PROSER3	Q2NL68	480 aa		32.71	■■■□□ 2.83
THRA-208	ENST00000578218	CRAMP1	Q96RY5	1269 aa		32.71	■■■□□ 2.83
THRA-208	ENST00000578218	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.71	■■■□□ 2.83
THRA-208	ENST00000578218	TCERG1	O14776	1098 aa	Known RBP	32.7	■■■□□ 2.83
THRA-208	ENST00000578218	GRIPAP1	Q4V328	841 aa		32.7	■■■□□ 2.83
THRA-208	ENST00000578218	LRP10	Q7Z4F1	713 aa		32.7	■■■□□ 2.83
THRA-208	ENST00000578218	PDIA6	Q15084	440 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	C3orf67	Q6ZVT6	689 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	PNMA8A	Q86V59	439 aa	Predicted RBP	32.69	■■■□□ 2.82
THRA-208	ENST00000578218	CCDC146	Q8IYE0	955 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	TNS4	Q8IZW8	715 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	NECTIN2	Q92692	538 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	NLRP3	Q96P20	1036 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	UTP14A	Q9BVJ6	771 aa	Known RBP	32.69	■■■□□ 2.82
THRA-208	ENST00000578218	GJA3	Q9Y6H8	435 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	CNTNAP1	P78357	1384 aa		32.69	■■■□□ 2.82
THRA-208	ENST00000578218	LARGE2	Q8N3Y3	721 aa		32.68	■■■□□ 2.82
THRA-208	ENST00000578218	TMX4	Q9H1E5	349 aa	Predicted RBP	32.68	■■■□□ 2.82
THRA-208	ENST00000578218	NEUROD2	Q15784	382 aa		32.67	■■■□□ 2.82
THRA-208	ENST00000578218	LTBP1	Q14766	1721 aa		32.67	■■■□□ 2.82
THRA-208	ENST00000578218	LMOD1	P29536	600 aa	Predicted RBP	32.66	■■■□□ 2.82
THRA-208	ENST00000578218	SLC51A	Q86UW1	340 aa		32.66	■■■□□ 2.82
THRA-208	ENST00000578218	TMEM88B	A6NKF7	163 aa		32.65	■■■□□ 2.82
THRA-208	ENST00000578218	AIMP1	Q12904	312 aa	Known RBP	32.65	■■■□□ 2.82
THRA-208	ENST00000578218	HSP90AB3P	Q58FF7	597 aa		32.65	■■■□□ 2.82
THRA-208	ENST00000578218	WDR43	Q15061	677 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
THRA-208	ENST00000578218	ABCC4	O15439	1325 aa		32.63	■■■□□ 2.81
THRA-208	ENST00000578218	DDX10	Q13206	875 aa	Known RBP	32.63	■■■□□ 2.81
THRA-208	ENST00000578218	COPS6	Q7L5N1	327 aa		32.63	■■■□□ 2.81
THRA-208	ENST00000578218	NIM1K	Q8IY84	436 aa		32.63	■■■□□ 2.81
THRA-208	ENST00000578218	XAGE3	Q8WTP9	111 aa		32.63	■■■□□ 2.81
THRA-208	ENST00000578218	LAS1L	Q9Y4W2	734 aa	Known RBP	32.63	■■■□□ 2.81
THRA-208	ENST00000578218	ITGBL1	O95965	494 aa	Predicted RBP	32.62	■■■□□ 2.81
THRA-208	ENST00000578218	MAP1S	Q66K74	1059 aa	Predicted RBP	32.62	■■■□□ 2.81
THRA-208	ENST00000578218	PPIP5K2	O43314	1243 aa		32.61	■■■□□ 2.81
THRA-208	ENST00000578218	CAPN15	O75808	1086 aa		32.61	■■■□□ 2.81
THRA-208	ENST00000578218	ATP6V0A2	Q9Y487	856 aa		32.6	■■■□□ 2.81
THRA-208	ENST00000578218	KRT24	Q2M2I5	525 aa		32.59	■■■□□ 2.81
THRA-208	ENST00000578218	SLC10A5	Q5PT55	438 aa		32.59	■■■□□ 2.81
THRA-208	ENST00000578218	NLRP10	Q86W26	655 aa		32.59	■■■□□ 2.81
THRA-208	ENST00000578218	CNTROB	Q8N137	903 aa		32.59	■■■□□ 2.81
THRA-208	ENST00000578218	RUNDC1	Q96C34	613 aa		32.59	■■■□□ 2.81
THRA-208	ENST00000578218	AOC3	Q16853	763 aa		32.58	■■■□□ 2.81
THRA-208	ENST00000578218	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
THRA-208	ENST00000578218	DDX60	Q8IY21	1712 aa	Known RBP	32.57	■■■□□ 2.81
THRA-208	ENST00000578218	SCNN1D	P51172	638 aa		32.57	■■■□□ 2.8
THRA-208	ENST00000578218	TRMT112	Q9UI30	125 aa	Known RBP	32.57	■■■□□ 2.8
THRA-208	ENST00000578218	HCLS1	P14317	486 aa	Predicted RBP	32.56	■■■□□ 2.8
THRA-208	ENST00000578218	SUPT20H	Q8NEM7	779 aa		32.56	■■■□□ 2.8
THRA-208	ENST00000578218	CHPF2	Q9P2E5	772 aa		32.56	■■■□□ 2.8
THRA-208	ENST00000578218	SH3TC1	Q8TE82	1336 aa		32.55	■■■□□ 2.8
THRA-208	ENST00000578218	CHL1	O00533	1208 aa		32.55	■■■□□ 2.8
THRA-208	ENST00000578218	TCIRG1	Q13488	830 aa		32.55	■■■□□ 2.8
THRA-208	ENST00000578218	HDGFL1	Q5TGJ6	251 aa		32.55	■■■□□ 2.8
THRA-208	ENST00000578218	VEGFB	P49765	207 aa		32.54	■■■□□ 2.8
THRA-208	ENST00000578218	TRIM35	Q9UPQ4	493 aa		32.54	■■■□□ 2.8
THRA-208	ENST00000578218	TAF1	P21675	1872 aa		32.54	■■■□□ 2.8
THRA-208	ENST00000578218	LRRC37A	A6NMS7	1700 aa		32.54	■■■□□ 2.8
THRA-208	ENST00000578218	DPP8	Q6V1X1	898 aa	Predicted RBP	32.53	■■■□□ 2.8
THRA-208	ENST00000578218	DDX46	Q7L014	1031 aa	Known RBP	32.53	■■■□□ 2.8
THRA-208	ENST00000578218	AIDA	Q96BJ3	306 aa		32.53	■■■□□ 2.8
THRA-208	ENST00000578218	TRPM7	Q96QT4	1865 aa		32.52	■■■□□ 2.8
THRA-208	ENST00000578218	EPS15	P42566	896 aa		32.52	■■■□□ 2.8
THRA-208	ENST00000578218	VPS33B	Q9H267	617 aa		32.52	■■■□□ 2.8
THRA-208	ENST00000578218	ABT1	Q9ULW3	272 aa	Known RBP	32.51	■■■□□ 2.79
THRA-208	ENST00000578218	BBOX1	O75936	387 aa		32.5	■■■□□ 2.79
THRA-208	ENST00000578218	HOXB7	P09629	217 aa		32.5	■■■□□ 2.79
THRA-208	ENST00000578218	GRAP	Q13588	217 aa		32.5	■■■□□ 2.79
THRA-208	ENST00000578218	USP50	Q70EL3	339 aa	Predicted RBP	32.5	■■■□□ 2.79
THRA-208	ENST00000578218	GRAPL	Q8TC17	118 aa	Predicted RBP	32.5	■■■□□ 2.79
THRA-208	ENST00000578218	ZNF428	Q96B54	188 aa		32.5	■■■□□ 2.79
THRA-208	ENST00000578218	FOXN1	O15353	648 aa		32.49	■■■□□ 2.79
THRA-208	ENST00000578218	SP8	Q8IXZ3	490 aa		32.49	■■■□□ 2.79
THRA-208	ENST00000578218	MPND	Q8N594	471 aa		32.49	■■■□□ 2.79
THRA-208	ENST00000578218	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms