RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 JDP2Q8WYK2 163 aa17.91■□□□□ 0.46
CNOT1-215ENST00000569020 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
CNOT1-215ENST00000569020 PSMD1Q99460 953 aa17.91■□□□□ 0.46
CNOT1-215ENST00000569020 ZNF541Q9H0D2 1346 aa17.91■□□□□ 0.46
CNOT1-215ENST00000569020 NTSR2O95665 410 aa17.9■□□□□ 0.46
CNOT1-215ENST00000569020 HOXA10P31260 410 aaPredicted RBP17.9■□□□□ 0.46
CNOT1-215ENST00000569020 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
CNOT1-215ENST00000569020 LDHDQ86WU2 507 aa17.9■□□□□ 0.46
CNOT1-215ENST00000569020 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
CNOT1-215ENST00000569020 CREBZFQ9NS37 354 aa17.9■□□□□ 0.46
CNOT1-215ENST00000569020 HACL1Q9UJ83 578 aa17.9■□□□□ 0.46
CNOT1-215ENST00000569020 SNED1Q8TER0 1413 aa17.89■□□□□ 0.46
CNOT1-215ENST00000569020 FZD9O00144 591 aa17.89■□□□□ 0.45
CNOT1-215ENST00000569020 PDIA6Q15084 440 aa17.89■□□□□ 0.45
CNOT1-215ENST00000569020 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
CNOT1-215ENST00000569020 CRAMP1Q96RY5 1269 aa17.89■□□□□ 0.45
CNOT1-215ENST00000569020 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
CNOT1-215ENST00000569020 EAPPQ56P03 285 aaPredicted RBP17.88■□□□□ 0.45
CNOT1-215ENST00000569020 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
CNOT1-215ENST00000569020 CCDC146Q8IYE0 955 aa17.88■□□□□ 0.45
CNOT1-215ENST00000569020 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
CNOT1-215ENST00000569020 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
CNOT1-215ENST00000569020 LAMB2P55268 1798 aa17.88■□□□□ 0.45
CNOT1-215ENST00000569020 ADAMTSL1Q8N6G6 1762 aa17.87■□□□□ 0.45
CNOT1-215ENST00000569020 PPEF1O14829 653 aaPredicted RBP17.87■□□□□ 0.45
CNOT1-215ENST00000569020 ANXA1P04083 346 aa17.87■□□□□ 0.45
CNOT1-215ENST00000569020 WDR43Q15061 677 aaKnown RBP eCLIP17.87■□□□□ 0.45
CNOT1-215ENST00000569020 HSP90AB3PQ58FF7 597 aa17.87■□□□□ 0.45
CNOT1-215ENST00000569020 PNMA8AQ86V59 439 aaPredicted RBP17.87■□□□□ 0.45
CNOT1-215ENST00000569020 GPC2Q8N158 579 aa17.87■□□□□ 0.45
CNOT1-215ENST00000569020 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
CNOT1-215ENST00000569020 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
CNOT1-215ENST00000569020 EPHX2P34913 555 aa17.86■□□□□ 0.45
CNOT1-215ENST00000569020 EIF6P56537 245 aaKnown RBP17.86■□□□□ 0.45
CNOT1-215ENST00000569020 PROSER3Q2NL68 480 aa17.86■□□□□ 0.45
CNOT1-215ENST00000569020 COPS6Q7L5N1 327 aa17.86■□□□□ 0.45
CNOT1-215ENST00000569020 NECTIN2Q92692 538 aa17.86■□□□□ 0.45
CNOT1-215ENST00000569020 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
CNOT1-215ENST00000569020 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
CNOT1-215ENST00000569020 HSPA1AP0DMV8 641 aaKnown RBP17.85■□□□□ 0.45
CNOT1-215ENST00000569020 HSPA1BP0DMV9 641 aaKnown RBP17.85■□□□□ 0.45
CNOT1-215ENST00000569020 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
CNOT1-215ENST00000569020 SLC10A5Q5PT55 438 aa17.85■□□□□ 0.45
CNOT1-215ENST00000569020 COL13A1Q5TAT6 717 aaPredicted RBP17.85■□□□□ 0.45
CNOT1-215ENST00000569020 LARGE2Q8N3Y3 721 aa17.85■□□□□ 0.45
CNOT1-215ENST00000569020 PASKQ96RG2 1323 aa17.85■□□□□ 0.45
CNOT1-215ENST00000569020 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
CNOT1-215ENST00000569020 CHL1O00533 1208 aa17.84■□□□□ 0.45
CNOT1-215ENST00000569020 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
CNOT1-215ENST00000569020 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
CNOT1-215ENST00000569020 COL4A5P29400 1685 aa17.83■□□□□ 0.45
CNOT1-215ENST00000569020 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.44
CNOT1-215ENST00000569020 DDX21Q9NR30 783 aaKnown RBP eCLIP17.83■□□□□ 0.44
CNOT1-215ENST00000569020 GJA3Q9Y6H8 435 aa17.83■□□□□ 0.44
CNOT1-215ENST00000569020 ITGBL1O95965 494 aaPredicted RBP17.82■□□□□ 0.44
CNOT1-215ENST00000569020 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
CNOT1-215ENST00000569020 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
CNOT1-215ENST00000569020 ATP6V0A2Q9Y487 856 aa17.82■□□□□ 0.44
CNOT1-215ENST00000569020 TMEM88BA6NKF7 163 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 NLRP10Q86W26 655 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 NIM1KQ8IY84 436 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 VPS33BQ9H267 617 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
CNOT1-215ENST00000569020 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
CNOT1-215ENST00000569020 CNTNAP1P78357 1384 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 TAF1P21675 1872 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 ABCC4O15439 1325 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 PPIP5K2O43314 1243 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 SUPT20HQ8NEM7 779 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
CNOT1-215ENST00000569020 DDX60Q8IY21 1712 aaKnown RBP17.79■□□□□ 0.44
CNOT1-215ENST00000569020 BBOX1O75936 387 aa17.79■□□□□ 0.44
CNOT1-215ENST00000569020 HOXB7P09629 217 aa17.79■□□□□ 0.44
CNOT1-215ENST00000569020 MAP1SQ66K74 1059 aaPredicted RBP17.79■□□□□ 0.44
CNOT1-215ENST00000569020 SLC51AQ86UW1 340 aa17.79■□□□□ 0.44
CNOT1-215ENST00000569020 TNS4Q8IZW8 715 aa17.79■□□□□ 0.44
CNOT1-215ENST00000569020 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
CNOT1-215ENST00000569020 AOC3Q16853 763 aa17.78■□□□□ 0.44
CNOT1-215ENST00000569020 DDX46Q7L014 1031 aaKnown RBP17.78■□□□□ 0.44
CNOT1-215ENST00000569020 SP8Q8IXZ3 490 aa17.78■□□□□ 0.44
CNOT1-215ENST00000569020 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
CNOT1-215ENST00000569020 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
CNOT1-215ENST00000569020 DBF4Q9UBU7 674 aaPredicted RBP17.78■□□□□ 0.44
CNOT1-215ENST00000569020 SCNN1DP51172 638 aa17.77■□□□□ 0.44
CNOT1-215ENST00000569020 DPP8Q6V1X1 898 aaPredicted RBP17.77■□□□□ 0.44
CNOT1-215ENST00000569020 ANKRD13DQ6ZTN6 518 aa17.77■□□□□ 0.44
CNOT1-215ENST00000569020 TRPM7Q96QT4 1865 aa17.77■□□□□ 0.43
CNOT1-215ENST00000569020 EPS15P42566 896 aa17.76■□□□□ 0.43
CNOT1-215ENST00000569020 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-215ENST00000569020 GRAPQ13588 217 aa17.76■□□□□ 0.43
CNOT1-215ENST00000569020 MPNDQ8N594 471 aa17.76■□□□□ 0.43
CNOT1-215ENST00000569020 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-215ENST00000569020 RTFDC1Q9BY42 306 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-215ENST00000569020 PRKRIP1Q9H875 184 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms