RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 PNMA8AQ86V59 439 aaPredicted RBP14.1□□□□□ -0.15
AP3S2-206ENST00000558806 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
AP3S2-206ENST00000558806 GPC2Q8N158 579 aa14.1□□□□□ -0.15
AP3S2-206ENST00000558806 JDP2Q8WYK2 163 aa14.1□□□□□ -0.15
AP3S2-206ENST00000558806 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
AP3S2-206ENST00000558806 UBN2Q6ZU65 1347 aa14.1□□□□□ -0.15
AP3S2-206ENST00000558806 PPP1R42Q7Z4L9 355 aa14.09□□□□□ -0.15
AP3S2-206ENST00000558806 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
AP3S2-206ENST00000558806 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
AP3S2-206ENST00000558806 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
AP3S2-206ENST00000558806 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
AP3S2-206ENST00000558806 PARP10Q53GL7 1025 aa14.08□□□□□ -0.16
AP3S2-206ENST00000558806 SUSD4Q5VX71 490 aa14.08□□□□□ -0.16
AP3S2-206ENST00000558806 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.16
AP3S2-206ENST00000558806 BABAM1Q9NWV8 329 aa14.08□□□□□ -0.16
AP3S2-206ENST00000558806 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
AP3S2-206ENST00000558806 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
AP3S2-206ENST00000558806 TMEM88BA6NKF7 163 aa14.07□□□□□ -0.16
AP3S2-206ENST00000558806 NTSR2O95665 410 aa14.07□□□□□ -0.16
AP3S2-206ENST00000558806 ITGBL1O95965 494 aaPredicted RBP14.07□□□□□ -0.16
AP3S2-206ENST00000558806 EIF6P56537 245 aaKnown RBP14.07□□□□□ -0.16
AP3S2-206ENST00000558806 RIPK4P57078 832 aa14.07□□□□□ -0.16
AP3S2-206ENST00000558806 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
AP3S2-206ENST00000558806 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
AP3S2-206ENST00000558806 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
AP3S2-206ENST00000558806 RALBP1Q15311 655 aa14.06□□□□□ -0.16
AP3S2-206ENST00000558806 NLRP3Q96P20 1036 aa14.06□□□□□ -0.16
AP3S2-206ENST00000558806 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
AP3S2-206ENST00000558806 EIF2S2P20042 333 aaKnown RBP14.05□□□□□ -0.16
AP3S2-206ENST00000558806 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
AP3S2-206ENST00000558806 LRP10Q7Z4F1 713 aa14.05□□□□□ -0.16
AP3S2-206ENST00000558806 LARGE2Q8N3Y3 721 aa14.05□□□□□ -0.16
AP3S2-206ENST00000558806 UTP14AQ9BVJ6 771 aaKnown RBP14.05□□□□□ -0.16
AP3S2-206ENST00000558806 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
AP3S2-206ENST00000558806 PDIA6Q15084 440 aa14.04□□□□□ -0.16
AP3S2-206ENST00000558806 CNTROBQ8N137 903 aa14.04□□□□□ -0.16
AP3S2-206ENST00000558806 GJA3Q9Y6H8 435 aa14.04□□□□□ -0.16
AP3S2-206ENST00000558806 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
AP3S2-206ENST00000558806 CAPN15O75808 1086 aa14.03□□□□□ -0.16
AP3S2-206ENST00000558806 HSP90AB3PQ58FF7 597 aa14.03□□□□□ -0.16
AP3S2-206ENST00000558806 SLC10A5Q5PT55 438 aa14.03□□□□□ -0.16
AP3S2-206ENST00000558806 MAP1SQ66K74 1059 aaPredicted RBP14.03□□□□□ -0.16
AP3S2-206ENST00000558806 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
AP3S2-206ENST00000558806 COL4A5P29400 1685 aa14.03□□□□□ -0.16
AP3S2-206ENST00000558806 PPIP5K2O43314 1243 aa14.02□□□□□ -0.17
AP3S2-206ENST00000558806 VEGFBP49765 207 aa14.02□□□□□ -0.17
AP3S2-206ENST00000558806 PROSER3Q2NL68 480 aa14.02□□□□□ -0.17
AP3S2-206ENST00000558806 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
AP3S2-206ENST00000558806 NIM1KQ8IY84 436 aa14.02□□□□□ -0.17
AP3S2-206ENST00000558806 ATP6V0A2Q9Y487 856 aa14.02□□□□□ -0.17
AP3S2-206ENST00000558806 ABCC4O15439 1325 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 ANXA1P04083 346 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 SCNN1DP51172 638 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 USP50Q70EL3 339 aaPredicted RBP14.01□□□□□ -0.17
AP3S2-206ENST00000558806 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 SUPT20HQ8NEM7 779 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 AIDAQ96BJ3 306 aa14.01□□□□□ -0.17
AP3S2-206ENST00000558806 MYBBP1AQ9BQG0 1328 aaKnown RBP14□□□□□ -0.17
AP3S2-206ENST00000558806 FOXN1O15353 648 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 BBOX1O75936 387 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 EPS15P42566 896 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
AP3S2-206ENST00000558806 AOC3Q16853 763 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 DEFB115Q30KQ5 88 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 NLRP10Q86W26 655 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 XAGE3Q8WTP9 111 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 PRDM10Q9NQV6 1147 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 DDX21Q9NR30 783 aaKnown RBP eCLIP14□□□□□ -0.17
AP3S2-206ENST00000558806 LTBP1Q14766 1721 aa14□□□□□ -0.17
AP3S2-206ENST00000558806 ANKRD36CQ5JPF3 1778 aa13.99□□□□□ -0.17
AP3S2-206ENST00000558806 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
AP3S2-206ENST00000558806 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
AP3S2-206ENST00000558806 SLC51AQ86UW1 340 aa13.99□□□□□ -0.17
AP3S2-206ENST00000558806 NECTIN2Q92692 538 aa13.99□□□□□ -0.17
AP3S2-206ENST00000558806 RTFDC1Q9BY42 306 aaPredicted RBP13.99□□□□□ -0.17
AP3S2-206ENST00000558806 TRMT112Q9UI30 125 aaKnown RBP13.99□□□□□ -0.17
AP3S2-206ENST00000558806 ABT1Q9ULW3 272 aaKnown RBP13.99□□□□□ -0.17
AP3S2-206ENST00000558806 SH3TC1Q8TE82 1336 aa13.98□□□□□ -0.17
AP3S2-206ENST00000558806 CHL1O00533 1208 aa13.98□□□□□ -0.17
AP3S2-206ENST00000558806 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
AP3S2-206ENST00000558806 NEUROD2Q15784 382 aa13.98□□□□□ -0.17
AP3S2-206ENST00000558806 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
AP3S2-206ENST00000558806 DDX46Q7L014 1031 aaKnown RBP13.98□□□□□ -0.17
AP3S2-206ENST00000558806 SP8Q8IXZ3 490 aa13.98□□□□□ -0.17
AP3S2-206ENST00000558806 ADARB2Q9NS39 739 aaKnown RBP13.98□□□□□ -0.17
AP3S2-206ENST00000558806 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
AP3S2-206ENST00000558806 ZNRF3Q9ULT6 936 aa13.98□□□□□ -0.17
AP3S2-206ENST00000558806 HOXB7P09629 217 aa13.97□□□□□ -0.17
AP3S2-206ENST00000558806 WDR43Q15061 677 aaKnown RBP eCLIP13.97□□□□□ -0.17
AP3S2-206ENST00000558806 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
AP3S2-206ENST00000558806 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
AP3S2-206ENST00000558806 MPNDQ8N594 471 aa13.97□□□□□ -0.17
AP3S2-206ENST00000558806 RUNDC1Q96C34 613 aa13.97□□□□□ -0.17
AP3S2-206ENST00000558806 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
AP3S2-206ENST00000558806 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
AP3S2-206ENST00000558806 LAMB2P55268 1798 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
AP3S2-206ENST00000558806 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
AP3S2-206ENST00000558806 MAP2K1Q02750 393 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms