RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 RIPK4P57078 832 aa29.05■■■□□ 2.24
SPG21-205ENST00000558339 C3orf67Q6ZVT6 689 aa29.05■■■□□ 2.24
SPG21-205ENST00000558339 PSMD1Q99460 953 aa29.05■■■□□ 2.24
SPG21-205ENST00000558339 PASKQ96RG2 1323 aa29.04■■■□□ 2.24
SPG21-205ENST00000558339 COL4A5P29400 1685 aa29.04■■■□□ 2.24
SPG21-205ENST00000558339 RALBP1Q15311 655 aa29.03■■■□□ 2.24
SPG21-205ENST00000558339 PROSER3Q2NL68 480 aa29.03■■■□□ 2.24
SPG21-205ENST00000558339 RPGRQ92834 1020 aaKnown RBP29.03■■■□□ 2.24
SPG21-205ENST00000558339 ANXA1P04083 346 aa29.02■■■□□ 2.24
SPG21-205ENST00000558339 EIF2S2P20042 333 aaKnown RBP29.02■■■□□ 2.24
SPG21-205ENST00000558339 TMPOP42166 694 aaKnown RBP29.02■■■□□ 2.24
SPG21-205ENST00000558339 HACL1Q9UJ83 578 aa29.02■■■□□ 2.24
SPG21-205ENST00000558339 CC2D2BQ6DHV5 1058 aa29.01■■■□□ 2.23
SPG21-205ENST00000558339 MKRN1Q9UHC7 482 aaKnown RBP29.01■■■□□ 2.23
SPG21-205ENST00000558339 RNF123Q5XPI4 1314 aa29■■■□□ 2.23
SPG21-205ENST00000558339 ITGBL1O95965 494 aaPredicted RBP29■■■□□ 2.23
SPG21-205ENST00000558339 EAPPQ56P03 285 aaPredicted RBP29■■■□□ 2.23
SPG21-205ENST00000558339 CRAMP1Q96RY5 1269 aa29■■■□□ 2.23
SPG21-205ENST00000558339 ADAMTSL1Q8N6G6 1762 aa29■■■□□ 2.23
SPG21-205ENST00000558339 EPHX2P34913 555 aa28.99■■■□□ 2.23
SPG21-205ENST00000558339 BABAM1Q9NWV8 329 aa28.99■■■□□ 2.23
SPG21-205ENST00000558339 PARP10Q53GL7 1025 aa28.98■■■□□ 2.23
SPG21-205ENST00000558339 GPC2Q8N158 579 aa28.98■■■□□ 2.23
SPG21-205ENST00000558339 RBM17Q96I25 401 aaKnown RBP28.98■■■□□ 2.23
SPG21-205ENST00000558339 PPP1R42Q7Z4L9 355 aa28.97■■■□□ 2.23
SPG21-205ENST00000558339 PPEF1O14829 653 aaPredicted RBP28.96■■■□□ 2.23
SPG21-205ENST00000558339 JDP2Q8WYK2 163 aa28.96■■■□□ 2.23
SPG21-205ENST00000558339 TCERG1O14776 1098 aaKnown RBP28.95■■■□□ 2.22
SPG21-205ENST00000558339 SLC10A5Q5PT55 438 aa28.95■■■□□ 2.22
SPG21-205ENST00000558339 CNTNAP1P78357 1384 aa28.95■■■□□ 2.22
SPG21-205ENST00000558339 LMOD3Q0VAK6 560 aa28.94■■■□□ 2.22
SPG21-205ENST00000558339 CCDC146Q8IYE0 955 aa28.94■■■□□ 2.22
SPG21-205ENST00000558339 NECTIN2Q92692 538 aa28.94■■■□□ 2.22
SPG21-205ENST00000558339 UTP14AQ9BVJ6 771 aaKnown RBP28.94■■■□□ 2.22
SPG21-205ENST00000558339 CLEC11AQ9Y240 323 aa28.94■■■□□ 2.22
SPG21-205ENST00000558339 KRT24Q2M2I5 525 aa28.93■■■□□ 2.22
SPG21-205ENST00000558339 GRIPAP1Q4V328 841 aa28.93■■■□□ 2.22
SPG21-205ENST00000558339 COPS6Q7L5N1 327 aa28.93■■■□□ 2.22
SPG21-205ENST00000558339 TNS4Q8IZW8 715 aa28.93■■■□□ 2.22
SPG21-205ENST00000558339 NLRP3Q96P20 1036 aa28.93■■■□□ 2.22
SPG21-205ENST00000558339 LTBP1Q14766 1721 aa28.92■■■□□ 2.22
SPG21-205ENST00000558339 DDX10Q13206 875 aaKnown RBP28.92■■■□□ 2.22
SPG21-205ENST00000558339 PNMA8AQ86V59 439 aaPredicted RBP28.92■■■□□ 2.22
SPG21-205ENST00000558339 LARGE2Q8N3Y3 721 aa28.92■■■□□ 2.22
SPG21-205ENST00000558339 XAGE3Q8WTP9 111 aa28.92■■■□□ 2.22
SPG21-205ENST00000558339 GJA3Q9Y6H8 435 aa28.92■■■□□ 2.22
SPG21-205ENST00000558339 MYBBP1AQ9BQG0 1328 aaKnown RBP28.92■■■□□ 2.22
SPG21-205ENST00000558339 EIF6P56537 245 aaKnown RBP28.91■■■□□ 2.22
SPG21-205ENST00000558339 MAP1SQ66K74 1059 aaPredicted RBP28.91■■■□□ 2.22
SPG21-205ENST00000558339 TMEM88BA6NKF7 163 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 CHL1O00533 1208 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 AIMP1Q12904 312 aaKnown RBP28.9■■■□□ 2.22
SPG21-205ENST00000558339 NEUROD2Q15784 382 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 NLRP10Q86W26 655 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 CNTROBQ8N137 903 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 TRIM35Q9UPQ4 493 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 ABCC4O15439 1325 aa28.9■■■□□ 2.22
SPG21-205ENST00000558339 SCNN1DP51172 638 aa28.89■■■□□ 2.22
SPG21-205ENST00000558339 ATP6V0A2Q9Y487 856 aa28.89■■■□□ 2.22
SPG21-205ENST00000558339 DDX21Q9NR30 783 aaKnown RBP eCLIP28.88■■■□□ 2.21
SPG21-205ENST00000558339 ANKRD36CQ5JPF3 1778 aa28.86■■■□□ 2.21
SPG21-205ENST00000558339 HCLS1P14317 486 aaPredicted RBP28.86■■■□□ 2.21
SPG21-205ENST00000558339 EPS15P42566 896 aa28.86■■■□□ 2.21
SPG21-205ENST00000558339 VEGFBP49765 207 aa28.86■■■□□ 2.21
SPG21-205ENST00000558339 TCIRG1Q13488 830 aa28.86■■■□□ 2.21
SPG21-205ENST00000558339 HSP90AB3PQ58FF7 597 aa28.86■■■□□ 2.21
SPG21-205ENST00000558339 PPIP5K2O43314 1243 aa28.85■■■□□ 2.21
SPG21-205ENST00000558339 AOC3Q16853 763 aa28.85■■■□□ 2.21
SPG21-205ENST00000558339 RUNDC1Q96C34 613 aa28.85■■■□□ 2.21
SPG21-205ENST00000558339 CAPN15O75808 1086 aa28.84■■■□□ 2.21
SPG21-205ENST00000558339 NIM1KQ8IY84 436 aa28.84■■■□□ 2.21
SPG21-205ENST00000558339 RTFDC1Q9BY42 306 aaPredicted RBP28.84■■■□□ 2.21
SPG21-205ENST00000558339 CHPF2Q9P2E5 772 aa28.84■■■□□ 2.21
SPG21-205ENST00000558339 LAMB2P55268 1798 aa28.83■■■□□ 2.21
SPG21-205ENST00000558339 FOXN1O15353 648 aa28.83■■■□□ 2.21
SPG21-205ENST00000558339 LMOD1P29536 600 aaPredicted RBP28.83■■■□□ 2.21
SPG21-205ENST00000558339 LAS1LQ9Y4W2 734 aaKnown RBP28.83■■■□□ 2.21
SPG21-205ENST00000558339 TRMT112Q9UI30 125 aaKnown RBP28.82■■■□□ 2.2
SPG21-205ENST00000558339 ADAMTS8Q9UP79 889 aa28.82■■■□□ 2.2
SPG21-205ENST00000558339 RASSF10A6NK89 507 aa28.81■■■□□ 2.2
SPG21-205ENST00000558339 BBOX1O75936 387 aa28.81■■■□□ 2.2
SPG21-205ENST00000558339 FMR1Q06787 632 aaKnown RBP eCLIP28.81■■■□□ 2.2
SPG21-205ENST00000558339 SP8Q8IXZ3 490 aa28.81■■■□□ 2.2
SPG21-205ENST00000558339 ZNF428Q96B54 188 aa28.81■■■□□ 2.2
SPG21-205ENST00000558339 VPS33BQ9H267 617 aa28.81■■■□□ 2.2
SPG21-205ENST00000558339 SH3TC1Q8TE82 1336 aa28.8■■■□□ 2.2
SPG21-205ENST00000558339 WDR43Q15061 677 aaKnown RBP eCLIP28.8■■■□□ 2.2
SPG21-205ENST00000558339 TMX4Q9H1E5 349 aaPredicted RBP28.8■■■□□ 2.2
SPG21-205ENST00000558339 CXCL9Q07325 125 aa28.79■■■□□ 2.2
SPG21-205ENST00000558339 HDGFL1Q5TGJ6 251 aa28.79■■■□□ 2.2
SPG21-205ENST00000558339 DPP8Q6V1X1 898 aaPredicted RBP28.78■■■□□ 2.2
SPG21-205ENST00000558339 USP50Q70EL3 339 aaPredicted RBP28.78■■■□□ 2.2
SPG21-205ENST00000558339 HOXB7P09629 217 aa28.77■■■□□ 2.2
SPG21-205ENST00000558339 GRAPQ13588 217 aa28.77■■■□□ 2.2
SPG21-205ENST00000558339 DDX46Q7L014 1031 aaKnown RBP28.77■■■□□ 2.2
SPG21-205ENST00000558339 MPNDQ8N594 471 aa28.77■■■□□ 2.2
SPG21-205ENST00000558339 SUPT20HQ8NEM7 779 aa28.77■■■□□ 2.2
SPG21-205ENST00000558339 PLBD2Q8NHP8 589 aa28.77■■■□□ 2.2
SPG21-205ENST00000558339 GRAPLQ8TC17 118 aaPredicted RBP28.77■■■□□ 2.2
SPG21-205ENST00000558339 ZNRF3Q9ULT6 936 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms