RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 UBN2Q6ZU65 1347 aa29.24■■■□□ 2.27
GABRB3-206ENST00000554556 ZNF541Q9H0D2 1346 aa29.24■■■□□ 2.27
GABRB3-206ENST00000554556 FZD9O00144 591 aa29.24■■■□□ 2.27
GABRB3-206ENST00000554556 RBM17Q96I25 401 aaKnown RBP29.24■■■□□ 2.27
GABRB3-206ENST00000554556 HSPA1AP0DMV8 641 aaKnown RBP29.23■■■□□ 2.27
GABRB3-206ENST00000554556 HSPA1BP0DMV9 641 aaKnown RBP29.23■■■□□ 2.27
GABRB3-206ENST00000554556 EIF2S2P20042 333 aaKnown RBP29.23■■■□□ 2.27
GABRB3-206ENST00000554556 PARP10Q53GL7 1025 aa29.23■■■□□ 2.27
GABRB3-206ENST00000554556 EAPPQ56P03 285 aaPredicted RBP29.22■■■□□ 2.27
GABRB3-206ENST00000554556 CRAMP1Q96RY5 1269 aa29.22■■■□□ 2.27
GABRB3-206ENST00000554556 PNMA8AQ86V59 439 aaPredicted RBP29.21■■■□□ 2.27
GABRB3-206ENST00000554556 CLEC11AQ9Y240 323 aa29.21■■■□□ 2.27
GABRB3-206ENST00000554556 NTSR2O95665 410 aa29.2■■■□□ 2.26
GABRB3-206ENST00000554556 EPHX2P34913 555 aa29.2■■■□□ 2.26
GABRB3-206ENST00000554556 TMPOP42166 694 aaKnown RBP29.2■■■□□ 2.26
GABRB3-206ENST00000554556 GPC2Q8N158 579 aa29.2■■■□□ 2.26
GABRB3-206ENST00000554556 NLRP3Q96P20 1036 aa29.2■■■□□ 2.26
GABRB3-206ENST00000554556 TMX4Q9H1E5 349 aaPredicted RBP29.2■■■□□ 2.26
GABRB3-206ENST00000554556 EIF6P56537 245 aaKnown RBP29.19■■■□□ 2.26
GABRB3-206ENST00000554556 MKRN1Q9UHC7 482 aaKnown RBP29.19■■■□□ 2.26
GABRB3-206ENST00000554556 PASKQ96RG2 1323 aa29.19■■■□□ 2.26
GABRB3-206ENST00000554556 SNED1Q8TER0 1413 aa29.18■■■□□ 2.26
GABRB3-206ENST00000554556 PDIA6Q15084 440 aa29.17■■■□□ 2.26
GABRB3-206ENST00000554556 UTP14AQ9BVJ6 771 aaKnown RBP29.17■■■□□ 2.26
GABRB3-206ENST00000554556 PPEF1O14829 653 aaPredicted RBP29.16■■■□□ 2.26
GABRB3-206ENST00000554556 LRP10Q7Z4F1 713 aa29.16■■■□□ 2.26
GABRB3-206ENST00000554556 TNS4Q8IZW8 715 aa29.16■■■□□ 2.26
GABRB3-206ENST00000554556 RNF123Q5XPI4 1314 aa29.16■■■□□ 2.26
GABRB3-206ENST00000554556 HSP90AB3PQ58FF7 597 aa29.15■■■□□ 2.26
GABRB3-206ENST00000554556 SLC10A5Q5PT55 438 aa29.15■■■□□ 2.26
GABRB3-206ENST00000554556 LARGE2Q8N3Y3 721 aa29.15■■■□□ 2.26
GABRB3-206ENST00000554556 TMEM88BA6NKF7 163 aa29.14■■■□□ 2.26
GABRB3-206ENST00000554556 ITGBL1O95965 494 aaPredicted RBP29.14■■■□□ 2.26
GABRB3-206ENST00000554556 GJA3Q9Y6H8 435 aa29.14■■■□□ 2.26
GABRB3-206ENST00000554556 TCERG1O14776 1098 aaKnown RBP29.13■■■□□ 2.25
GABRB3-206ENST00000554556 LMOD1P29536 600 aaPredicted RBP29.13■■■□□ 2.25
GABRB3-206ENST00000554556 CNTNAP1P78357 1384 aa29.13■■■□□ 2.25
GABRB3-206ENST00000554556 ANXA1P04083 346 aa29.12■■■□□ 2.25
GABRB3-206ENST00000554556 MYBBP1AQ9BQG0 1328 aaKnown RBP29.12■■■□□ 2.25
GABRB3-206ENST00000554556 NEUROD2Q15784 382 aa29.11■■■□□ 2.25
GABRB3-206ENST00000554556 PROSER3Q2NL68 480 aa29.11■■■□□ 2.25
GABRB3-206ENST00000554556 COPS6Q7L5N1 327 aa29.11■■■□□ 2.25
GABRB3-206ENST00000554556 CNTROBQ8N137 903 aa29.11■■■□□ 2.25
GABRB3-206ENST00000554556 VPS33BQ9H267 617 aa29.11■■■□□ 2.25
GABRB3-206ENST00000554556 AIMP1Q12904 312 aaKnown RBP29.1■■■□□ 2.25
GABRB3-206ENST00000554556 C3orf67Q6ZVT6 689 aa29.1■■■□□ 2.25
GABRB3-206ENST00000554556 NIM1KQ8IY84 436 aa29.1■■■□□ 2.25
GABRB3-206ENST00000554556 NECTIN2Q92692 538 aa29.1■■■□□ 2.25
GABRB3-206ENST00000554556 ADAMTSL1Q8N6G6 1762 aa29.1■■■□□ 2.25
GABRB3-206ENST00000554556 DDX10Q13206 875 aaKnown RBP29.09■■■□□ 2.25
GABRB3-206ENST00000554556 DDX21Q9NR30 783 aaKnown RBP eCLIP29.09■■■□□ 2.25
GABRB3-206ENST00000554556 ATP6V0A2Q9Y487 856 aa29.09■■■□□ 2.25
GABRB3-206ENST00000554556 WDR43Q15061 677 aaKnown RBP eCLIP29.08■■■□□ 2.25
GABRB3-206ENST00000554556 MAP1SQ66K74 1059 aaPredicted RBP29.08■■■□□ 2.25
GABRB3-206ENST00000554556 CCDC146Q8IYE0 955 aa29.08■■■□□ 2.25
GABRB3-206ENST00000554556 SUPT20HQ8NEM7 779 aa29.08■■■□□ 2.25
GABRB3-206ENST00000554556 XAGE3Q8WTP9 111 aa29.08■■■□□ 2.25
GABRB3-206ENST00000554556 RUNDC1Q96C34 613 aa29.08■■■□□ 2.25
GABRB3-206ENST00000554556 ANKRD36CQ5JPF3 1778 aa29.08■■■□□ 2.25
GABRB3-206ENST00000554556 CHL1O00533 1208 aa29.07■■■□□ 2.24
GABRB3-206ENST00000554556 PPIP5K2O43314 1243 aa29.07■■■□□ 2.24
GABRB3-206ENST00000554556 BBOX1O75936 387 aa29.07■■■□□ 2.24
GABRB3-206ENST00000554556 TCIRG1Q13488 830 aa29.07■■■□□ 2.24
GABRB3-206ENST00000554556 LAS1LQ9Y4W2 734 aaKnown RBP29.07■■■□□ 2.24
GABRB3-206ENST00000554556 NLRP10Q86W26 655 aa29.06■■■□□ 2.24
GABRB3-206ENST00000554556 COL4A5P29400 1685 aa29.05■■■□□ 2.24
GABRB3-206ENST00000554556 TRMT112Q9UI30 125 aaKnown RBP29.05■■■□□ 2.24
GABRB3-206ENST00000554556 ABCC4O15439 1325 aa29.04■■■□□ 2.24
GABRB3-206ENST00000554556 SH3TC1Q8TE82 1336 aa29.03■■■□□ 2.24
GABRB3-206ENST00000554556 VEGFBP49765 207 aa29.03■■■□□ 2.24
GABRB3-206ENST00000554556 DDX46Q7L014 1031 aaKnown RBP29.03■■■□□ 2.24
GABRB3-206ENST00000554556 SP8Q8IXZ3 490 aa29.03■■■□□ 2.24
GABRB3-206ENST00000554556 CAPN15O75808 1086 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 HCLS1P14317 486 aaPredicted RBP29.02■■■□□ 2.24
GABRB3-206ENST00000554556 EPS15P42566 896 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 SCNN1DP51172 638 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 AOC3Q16853 763 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 DEFB115Q30KQ5 88 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 USP50Q70EL3 339 aaPredicted RBP29.02■■■□□ 2.24
GABRB3-206ENST00000554556 AIDAQ96BJ3 306 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 TRIM35Q9UPQ4 493 aa29.02■■■□□ 2.24
GABRB3-206ENST00000554556 LAMB2P55268 1798 aa29.01■■■□□ 2.23
GABRB3-206ENST00000554556 DPP8Q6V1X1 898 aaPredicted RBP29.01■■■□□ 2.23
GABRB3-206ENST00000554556 MPNDQ8N594 471 aa29.01■■■□□ 2.23
GABRB3-206ENST00000554556 RTFDC1Q9BY42 306 aaPredicted RBP29.01■■■□□ 2.23
GABRB3-206ENST00000554556 HOXB7P09629 217 aa29■■■□□ 2.23
GABRB3-206ENST00000554556 KRT24Q2M2I5 525 aa29■■■□□ 2.23
GABRB3-206ENST00000554556 HDGFL1Q5TGJ6 251 aa29■■■□□ 2.23
GABRB3-206ENST00000554556 SLC51AQ86UW1 340 aa29■■■□□ 2.23
GABRB3-206ENST00000554556 ZNRF3Q9ULT6 936 aa29■■■□□ 2.23
GABRB3-206ENST00000554556 PCNTO95613 3336 aa28.99■■■□□ 2.23
GABRB3-206ENST00000554556 RASSF10A6NK89 507 aa28.99■■■□□ 2.23
GABRB3-206ENST00000554556 PLBD2Q8NHP8 589 aa28.99■■■□□ 2.23
GABRB3-206ENST00000554556 CHPF2Q9P2E5 772 aa28.99■■■□□ 2.23
GABRB3-206ENST00000554556 LTBP1Q14766 1721 aa28.98■■■□□ 2.23
GABRB3-206ENST00000554556 FOXN1O15353 648 aa28.98■■■□□ 2.23
GABRB3-206ENST00000554556 GRAPQ13588 217 aa28.98■■■□□ 2.23
GABRB3-206ENST00000554556 TMC4Q7Z404 712 aa28.98■■■□□ 2.23
GABRB3-206ENST00000554556 GRAPLQ8TC17 118 aaPredicted RBP28.98■■■□□ 2.23
GABRB3-206ENST00000554556 DBF4Q9UBU7 674 aaPredicted RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms