RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 GPC2Q8N158 579 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
CHD8-203ENST00000553283 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 NTSR2O95665 410 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 PDIA6Q15084 440 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 RALBP1Q15311 655 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 PCNTO95613 3336 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 SNED1Q8TER0 1413 aa12.34□□□□□ -0.43
CHD8-203ENST00000553283 TMEM88BA6NKF7 163 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
CHD8-203ENST00000553283 EIF6P56537 245 aaKnown RBP12.33□□□□□ -0.44
CHD8-203ENST00000553283 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
CHD8-203ENST00000553283 SCN4AP35499 1836 aa12.32□□□□□ -0.44
CHD8-203ENST00000553283 CNTNAP1P78357 1384 aa12.32□□□□□ -0.44
CHD8-203ENST00000553283 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
CHD8-203ENST00000553283 TMPOP42166 694 aaKnown RBP12.32□□□□□ -0.44
CHD8-203ENST00000553283 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
CHD8-203ENST00000553283 LARGE2Q8N3Y3 721 aa12.32□□□□□ -0.44
CHD8-203ENST00000553283 UTP14AQ9BVJ6 771 aaKnown RBP12.32□□□□□ -0.44
CHD8-203ENST00000553283 LAMB4A4D0S4 1761 aa12.32□□□□□ -0.44
CHD8-203ENST00000553283 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
CHD8-203ENST00000553283 TCERG1O14776 1098 aaKnown RBP12.31□□□□□ -0.44
CHD8-203ENST00000553283 CAPN15O75808 1086 aa12.31□□□□□ -0.44
CHD8-203ENST00000553283 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
CHD8-203ENST00000553283 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
CHD8-203ENST00000553283 MAP1SQ66K74 1059 aaPredicted RBP12.31□□□□□ -0.44
CHD8-203ENST00000553283 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
CHD8-203ENST00000553283 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
CHD8-203ENST00000553283 NUP98P52948 1817 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 ANXA1P04083 346 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 LMOD1P29536 600 aaPredicted RBP12.3□□□□□ -0.44
CHD8-203ENST00000553283 VEGFBP49765 207 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
CHD8-203ENST00000553283 CHL1O00533 1208 aa12.29□□□□□ -0.44
CHD8-203ENST00000553283 BBOX1O75936 387 aa12.29□□□□□ -0.44
CHD8-203ENST00000553283 EPS15P42566 896 aa12.29□□□□□ -0.44
CHD8-203ENST00000553283 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
CHD8-203ENST00000553283 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
CHD8-203ENST00000553283 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
CHD8-203ENST00000553283 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 FOXN1O15353 648 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 SCNN1DP51172 638 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 AIMP1Q12904 312 aaKnown RBP12.28□□□□□ -0.44
CHD8-203ENST00000553283 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 DEFB115Q30KQ5 88 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 NLRP10Q86W26 655 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 COL4A5P29400 1685 aa12.28□□□□□ -0.44
CHD8-203ENST00000553283 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.45
CHD8-203ENST00000553283 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
CHD8-203ENST00000553283 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 SUPT20HQ8NEM7 779 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.45
CHD8-203ENST00000553283 DDX21Q9NR30 783 aaKnown RBP eCLIP12.27□□□□□ -0.45
CHD8-203ENST00000553283 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 ABCC4O15439 1325 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 ADAMTSL1Q8N6G6 1762 aa12.27□□□□□ -0.45
CHD8-203ENST00000553283 DDX10Q13206 875 aaKnown RBP12.26□□□□□ -0.45
CHD8-203ENST00000553283 AOC3Q16853 763 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
CHD8-203ENST00000553283 MPNDQ8N594 471 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 RUNDC1Q96C34 613 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
CHD8-203ENST00000553283 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
CHD8-203ENST00000553283 MYBBP1AQ9BQG0 1328 aaKnown RBP12.26□□□□□ -0.45
CHD8-203ENST00000553283 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
CHD8-203ENST00000553283 CXCL9Q07325 125 aa12.25□□□□□ -0.45
CHD8-203ENST00000553283 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
CHD8-203ENST00000553283 GPRC5DQ9NZD1 345 aa12.25□□□□□ -0.45
CHD8-203ENST00000553283 ABT1Q9ULW3 272 aaKnown RBP12.25□□□□□ -0.45
CHD8-203ENST00000553283 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
CHD8-203ENST00000553283 SH3TC1Q8TE82 1336 aa12.25□□□□□ -0.45
CHD8-203ENST00000553283 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHD8-203ENST00000553283 KIAA2012Q0VF49 1180 aa12.24□□□□□ -0.45
CHD8-203ENST00000553283 GRAPQ13588 217 aa12.24□□□□□ -0.45
CHD8-203ENST00000553283 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
CHD8-203ENST00000553283 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
CHD8-203ENST00000553283 GRAPLQ8TC17 118 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms