RNA–Protein interactions for RNA: ENST00000549760.1

RAB3IP-211, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-211ENST00000549760 COL13A1Q5TAT6 717 aaPredicted RBP27.57■■■□□ 2
RAB3IP-211ENST00000549760 CC2D2BQ6DHV5 1058 aa27.57■■■□□ 2
RAB3IP-211ENST00000549760 COL4A5P29400 1685 aa27.56■■■□□ 2
RAB3IP-211ENST00000549760 HSPA1AP0DMV8 641 aaKnown RBP27.56■■■□□ 2
RAB3IP-211ENST00000549760 HSPA1BP0DMV9 641 aaKnown RBP27.56■■■□□ 2
RAB3IP-211ENST00000549760 EIF2S2P20042 333 aaKnown RBP27.56■■■□□ 2
RAB3IP-211ENST00000549760 HOXA10P31260 410 aaPredicted RBP27.56■■■□□ 2
RAB3IP-211ENST00000549760 HACL1Q9UJ83 578 aa27.56■■■□□ 2
RAB3IP-211ENST00000549760 FZD9O00144 591 aa27.55■■■□□ 2
RAB3IP-211ENST00000549760 TMPOP42166 694 aaKnown RBP27.55■■■□□ 2
RAB3IP-211ENST00000549760 EAPPQ56P03 285 aaPredicted RBP27.55■■■□□ 2
RAB3IP-211ENST00000549760 PPP1R42Q7Z4L9 355 aa27.55■■■□□ 2
RAB3IP-211ENST00000549760 PARP10Q53GL7 1025 aa27.54■■■□□ 2
RAB3IP-211ENST00000549760 RNF123Q5XPI4 1314 aa27.54■■■□□ 2
RAB3IP-211ENST00000549760 LRP10Q7Z4F1 713 aa27.54■■■□□ 2
RAB3IP-211ENST00000549760 JDP2Q8WYK2 163 aa27.54■■■□□ 2
RAB3IP-211ENST00000549760 BABAM1Q9NWV8 329 aa27.54■■■□□ 2
RAB3IP-211ENST00000549760 PPEF1O14829 653 aaPredicted RBP27.53■■■□□ 2
RAB3IP-211ENST00000549760 PDIA6Q15084 440 aa27.53■■■□□ 2
RAB3IP-211ENST00000549760 RBM17Q96I25 401 aaKnown RBP27.53■■■□□ 2
RAB3IP-211ENST00000549760 MKRN1Q9UHC7 482 aaKnown RBP27.53■■■□□ 2
RAB3IP-211ENST00000549760 PASKQ96RG2 1323 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 MYBBP1AQ9BQG0 1328 aaKnown RBP27.52■■■□□ 2
RAB3IP-211ENST00000549760 ANXA1P04083 346 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 EPHX2P34913 555 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 PROSER3Q2NL68 480 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 GPC2Q8N158 579 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 CRAMP1Q96RY5 1269 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 LTBP1Q14766 1721 aa27.52■■■□□ 2
RAB3IP-211ENST00000549760 C3orf67Q6ZVT6 689 aa27.51■■□□□ 1.99
RAB3IP-211ENST00000549760 GRIPAP1Q4V328 841 aa27.5■■□□□ 1.99
RAB3IP-211ENST00000549760 CLEC11AQ9Y240 323 aa27.5■■□□□ 1.99
RAB3IP-211ENST00000549760 TCERG1O14776 1098 aaKnown RBP27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 EIF6P56537 245 aaKnown RBP27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 SLC51AQ86UW1 340 aa27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 CCDC146Q8IYE0 955 aa27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 NECTIN2Q92692 538 aa27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 NLRP3Q96P20 1036 aa27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 UTP14AQ9BVJ6 771 aaKnown RBP27.49■■□□□ 1.99
RAB3IP-211ENST00000549760 CNTNAP1P78357 1384 aa27.48■■□□□ 1.99
RAB3IP-211ENST00000549760 PNMA8AQ86V59 439 aaPredicted RBP27.48■■□□□ 1.99
RAB3IP-211ENST00000549760 LARGE2Q8N3Y3 721 aa27.48■■□□□ 1.99
RAB3IP-211ENST00000549760 DDX10Q13206 875 aaKnown RBP27.47■■□□□ 1.99
RAB3IP-211ENST00000549760 NEUROD2Q15784 382 aa27.47■■□□□ 1.99
RAB3IP-211ENST00000549760 TNS4Q8IZW8 715 aa27.47■■□□□ 1.99
RAB3IP-211ENST00000549760 GJA3Q9Y6H8 435 aa27.47■■□□□ 1.99
RAB3IP-211ENST00000549760 HSP90AB3PQ58FF7 597 aa27.46■■□□□ 1.99
RAB3IP-211ENST00000549760 TAF1P21675 1872 aa27.45■■□□□ 1.99
RAB3IP-211ENST00000549760 DDX60Q8IY21 1712 aaKnown RBP27.45■■□□□ 1.99
RAB3IP-211ENST00000549760 ITGBL1O95965 494 aaPredicted RBP27.45■■□□□ 1.98
RAB3IP-211ENST00000549760 AIMP1Q12904 312 aaKnown RBP27.45■■□□□ 1.98
RAB3IP-211ENST00000549760 COPS6Q7L5N1 327 aa27.45■■□□□ 1.98
RAB3IP-211ENST00000549760 XAGE3Q8WTP9 111 aa27.45■■□□□ 1.98
RAB3IP-211ENST00000549760 TMX4Q9H1E5 349 aaPredicted RBP27.45■■□□□ 1.98
RAB3IP-211ENST00000549760 ABCC4O15439 1325 aa27.44■■□□□ 1.98
RAB3IP-211ENST00000549760 TMEM88BA6NKF7 163 aa27.44■■□□□ 1.98
RAB3IP-211ENST00000549760 LMOD1P29536 600 aaPredicted RBP27.44■■□□□ 1.98
RAB3IP-211ENST00000549760 WDR43Q15061 677 aaKnown RBP eCLIP27.44■■□□□ 1.98
RAB3IP-211ENST00000549760 KRT24Q2M2I5 525 aa27.43■■□□□ 1.98
RAB3IP-211ENST00000549760 SLC10A5Q5PT55 438 aa27.43■■□□□ 1.98
RAB3IP-211ENST00000549760 NIM1KQ8IY84 436 aa27.43■■□□□ 1.98
RAB3IP-211ENST00000549760 RUNDC1Q96C34 613 aa27.43■■□□□ 1.98
RAB3IP-211ENST00000549760 PPIP5K2O43314 1243 aa27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 MAP1SQ66K74 1059 aaPredicted RBP27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 NLRP10Q86W26 655 aa27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 DDX21Q9NR30 783 aaKnown RBP eCLIP27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 ATP6V0A2Q9Y487 856 aa27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 LAS1LQ9Y4W2 734 aaKnown RBP27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 TRPM7Q96QT4 1865 aa27.42■■□□□ 1.98
RAB3IP-211ENST00000549760 LRRC37AA6NMS7 1700 aa27.41■■□□□ 1.98
RAB3IP-211ENST00000549760 CHL1O00533 1208 aa27.41■■□□□ 1.98
RAB3IP-211ENST00000549760 CNTROBQ8N137 903 aa27.41■■□□□ 1.98
RAB3IP-211ENST00000549760 TRIM35Q9UPQ4 493 aa27.4■■□□□ 1.98
RAB3IP-211ENST00000549760 SCNN1DP51172 638 aa27.39■■□□□ 1.98
RAB3IP-211ENST00000549760 TCIRG1Q13488 830 aa27.39■■□□□ 1.98
RAB3IP-211ENST00000549760 AOC3Q16853 763 aa27.39■■□□□ 1.98
RAB3IP-211ENST00000549760 CHPF2Q9P2E5 772 aa27.39■■□□□ 1.98
RAB3IP-211ENST00000549760 TRMT112Q9UI30 125 aaKnown RBP27.39■■□□□ 1.98
RAB3IP-211ENST00000549760 HCLS1P14317 486 aaPredicted RBP27.38■■□□□ 1.97
RAB3IP-211ENST00000549760 HDGFL1Q5TGJ6 251 aa27.38■■□□□ 1.97
RAB3IP-211ENST00000549760 SH3TC1Q8TE82 1336 aa27.38■■□□□ 1.97
RAB3IP-211ENST00000549760 CAPN15O75808 1086 aa27.37■■□□□ 1.97
RAB3IP-211ENST00000549760 SUPT20HQ8NEM7 779 aa27.37■■□□□ 1.97
RAB3IP-211ENST00000549760 EPS15P42566 896 aa27.36■■□□□ 1.97
RAB3IP-211ENST00000549760 VPS33BQ9H267 617 aa27.36■■□□□ 1.97
RAB3IP-211ENST00000549760 HOXB7P09629 217 aa27.35■■□□□ 1.97
RAB3IP-211ENST00000549760 VEGFBP49765 207 aa27.35■■□□□ 1.97
RAB3IP-211ENST00000549760 DPP8Q6V1X1 898 aaPredicted RBP27.35■■□□□ 1.97
RAB3IP-211ENST00000549760 DDX46Q7L014 1031 aaKnown RBP27.35■■□□□ 1.97
RAB3IP-211ENST00000549760 DUOX1Q9NRD9 1551 aa27.35■■□□□ 1.97
RAB3IP-211ENST00000549760 BBOX1O75936 387 aa27.34■■□□□ 1.97
RAB3IP-211ENST00000549760 RTFDC1Q9BY42 306 aaPredicted RBP27.34■■□□□ 1.97
RAB3IP-211ENST00000549760 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
RAB3IP-211ENST00000549760 GRAPQ13588 217 aa27.33■■□□□ 1.97
RAB3IP-211ENST00000549760 USP50Q70EL3 339 aaPredicted RBP27.33■■□□□ 1.97
RAB3IP-211ENST00000549760 SP8Q8IXZ3 490 aa27.33■■□□□ 1.97
RAB3IP-211ENST00000549760 GRAPLQ8TC17 118 aaPredicted RBP27.33■■□□□ 1.97
RAB3IP-211ENST00000549760 THSD7BQ9C0I4 1608 aa27.32■■□□□ 1.96
RAB3IP-211ENST00000549760 RASSF10A6NK89 507 aa27.32■■□□□ 1.96
RAB3IP-211ENST00000549760 FOXN1O15353 648 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms