RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 ERBB4Q15303 1308 aa26.39■■□□□ 1.82
SCN8A-204ENST00000546961 EPHX2P34913 555 aa26.39■■□□□ 1.82
SCN8A-204ENST00000546961 RALBP1Q15311 655 aa26.39■■□□□ 1.82
SCN8A-204ENST00000546961 PPP1R42Q7Z4L9 355 aa26.39■■□□□ 1.82
SCN8A-204ENST00000546961 TNS4Q8IZW8 715 aa26.39■■□□□ 1.82
SCN8A-204ENST00000546961 PDIA6Q15084 440 aa26.38■■□□□ 1.81
SCN8A-204ENST00000546961 CRAMP1Q96RY5 1269 aa26.38■■□□□ 1.81
SCN8A-204ENST00000546961 KDM3BQ7LBC6 1761 aa26.38■■□□□ 1.81
SCN8A-204ENST00000546961 PASKQ96RG2 1323 aa26.38■■□□□ 1.81
SCN8A-204ENST00000546961 NTSR2O95665 410 aa26.37■■□□□ 1.81
SCN8A-204ENST00000546961 ITGBL1O95965 494 aaPredicted RBP26.37■■□□□ 1.81
SCN8A-204ENST00000546961 ANXA1P04083 346 aa26.37■■□□□ 1.81
SCN8A-204ENST00000546961 GPC2Q8N158 579 aa26.37■■□□□ 1.81
SCN8A-204ENST00000546961 GJA3Q9Y6H8 435 aa26.37■■□□□ 1.81
SCN8A-204ENST00000546961 RNF123Q5XPI4 1314 aa26.37■■□□□ 1.81
SCN8A-204ENST00000546961 TMPOP42166 694 aaKnown RBP26.36■■□□□ 1.81
SCN8A-204ENST00000546961 EIF6P56537 245 aaKnown RBP26.36■■□□□ 1.81
SCN8A-204ENST00000546961 PARP10Q53GL7 1025 aa26.36■■□□□ 1.81
SCN8A-204ENST00000546961 C3orf67Q6ZVT6 689 aa26.36■■□□□ 1.81
SCN8A-204ENST00000546961 PNMA8AQ86V59 439 aaPredicted RBP26.36■■□□□ 1.81
SCN8A-204ENST00000546961 NECTIN2Q92692 538 aa26.36■■□□□ 1.81
SCN8A-204ENST00000546961 NLRP3Q96P20 1036 aa26.36■■□□□ 1.81
SCN8A-204ENST00000546961 LAMB4A4D0S4 1761 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 NUP98P52948 1817 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 CAPN15O75808 1086 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 NEUROD2Q15784 382 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 PROSER3Q2NL68 480 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 GRIPAP1Q4V328 841 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 LRP10Q7Z4F1 713 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 UTP14AQ9BVJ6 771 aaKnown RBP26.35■■□□□ 1.81
SCN8A-204ENST00000546961 BABAM1Q9NWV8 329 aa26.35■■□□□ 1.81
SCN8A-204ENST00000546961 IBTKQ9P2D0 1353 aaPredicted RBP26.34■■□□□ 1.81
SCN8A-204ENST00000546961 LARGE2Q8N3Y3 721 aa26.34■■□□□ 1.81
SCN8A-204ENST00000546961 TMEM88BA6NKF7 163 aa26.33■■□□□ 1.81
SCN8A-204ENST00000546961 PPEF1O14829 653 aaPredicted RBP26.33■■□□□ 1.81
SCN8A-204ENST00000546961 LMOD3Q0VAK6 560 aa26.33■■□□□ 1.81
SCN8A-204ENST00000546961 AIMP1Q12904 312 aaKnown RBP26.33■■□□□ 1.81
SCN8A-204ENST00000546961 SLC10A5Q5PT55 438 aa26.33■■□□□ 1.81
SCN8A-204ENST00000546961 SLC51AQ86UW1 340 aa26.33■■□□□ 1.81
SCN8A-204ENST00000546961 CNTROBQ8N137 903 aa26.33■■□□□ 1.81
SCN8A-204ENST00000546961 SCN4AP35499 1836 aa26.32■■□□□ 1.8
SCN8A-204ENST00000546961 MAP1SQ66K74 1059 aaPredicted RBP26.32■■□□□ 1.8
SCN8A-204ENST00000546961 COPS6Q7L5N1 327 aa26.32■■□□□ 1.8
SCN8A-204ENST00000546961 TMX4Q9H1E5 349 aaPredicted RBP26.32■■□□□ 1.8
SCN8A-204ENST00000546961 DDX10Q13206 875 aaKnown RBP26.31■■□□□ 1.8
SCN8A-204ENST00000546961 CCDC146Q8IYE0 955 aa26.31■■□□□ 1.8
SCN8A-204ENST00000546961 SNED1Q8TER0 1413 aa26.31■■□□□ 1.8
SCN8A-204ENST00000546961 XAGE3Q8WTP9 111 aa26.3■■□□□ 1.8
SCN8A-204ENST00000546961 LAS1LQ9Y4W2 734 aaKnown RBP26.3■■□□□ 1.8
SCN8A-204ENST00000546961 LMOD1P29536 600 aaPredicted RBP26.29■■□□□ 1.8
SCN8A-204ENST00000546961 CNTNAP1P78357 1384 aa26.29■■□□□ 1.8
SCN8A-204ENST00000546961 RIC1Q4ADV7 1423 aa26.29■■□□□ 1.8
SCN8A-204ENST00000546961 VEGFBP49765 207 aa26.28■■□□□ 1.8
SCN8A-204ENST00000546961 NIM1KQ8IY84 436 aa26.28■■□□□ 1.8
SCN8A-204ENST00000546961 ATP6V0A2Q9Y487 856 aa26.28■■□□□ 1.8
SCN8A-204ENST00000546961 PPIP5K2O43314 1243 aa26.27■■□□□ 1.8
SCN8A-204ENST00000546961 HCLS1P14317 486 aaPredicted RBP26.27■■□□□ 1.8
SCN8A-204ENST00000546961 EPS15P42566 896 aa26.27■■□□□ 1.8
SCN8A-204ENST00000546961 HSP90AB3PQ58FF7 597 aa26.27■■□□□ 1.8
SCN8A-204ENST00000546961 CHL1O00533 1208 aa26.26■■□□□ 1.79
SCN8A-204ENST00000546961 KRT24Q2M2I5 525 aa26.26■■□□□ 1.79
SCN8A-204ENST00000546961 NLRP10Q86W26 655 aa26.26■■□□□ 1.79
SCN8A-204ENST00000546961 BBOX1O75936 387 aa26.25■■□□□ 1.79
SCN8A-204ENST00000546961 TCIRG1Q13488 830 aa26.25■■□□□ 1.79
SCN8A-204ENST00000546961 DDX21Q9NR30 783 aaKnown RBP eCLIP26.25■■□□□ 1.79
SCN8A-204ENST00000546961 TRMT112Q9UI30 125 aaKnown RBP26.25■■□□□ 1.79
SCN8A-204ENST00000546961 ABCC4O15439 1325 aa26.24■■□□□ 1.79
SCN8A-204ENST00000546961 MYBBP1AQ9BQG0 1328 aaKnown RBP26.24■■□□□ 1.79
SCN8A-204ENST00000546961 AOC3Q16853 763 aa26.24■■□□□ 1.79
SCN8A-204ENST00000546961 ZNF428Q96B54 188 aa26.24■■□□□ 1.79
SCN8A-204ENST00000546961 COL4A5P29400 1685 aa26.24■■□□□ 1.79
SCN8A-204ENST00000546961 SCNN1DP51172 638 aa26.23■■□□□ 1.79
SCN8A-204ENST00000546961 WDR43Q15061 677 aaKnown RBP eCLIP26.23■■□□□ 1.79
SCN8A-204ENST00000546961 DEFB115Q30KQ5 88 aa26.23■■□□□ 1.79
SCN8A-204ENST00000546961 RUNDC1Q96C34 613 aa26.23■■□□□ 1.79
SCN8A-204ENST00000546961 TRIM35Q9UPQ4 493 aa26.23■■□□□ 1.79
SCN8A-204ENST00000546961 FOXN1O15353 648 aa26.22■■□□□ 1.79
SCN8A-204ENST00000546961 DDX46Q7L014 1031 aaKnown RBP26.22■■□□□ 1.79
SCN8A-204ENST00000546961 SP8Q8IXZ3 490 aa26.22■■□□□ 1.79
SCN8A-204ENST00000546961 SUPT20HQ8NEM7 779 aa26.22■■□□□ 1.79
SCN8A-204ENST00000546961 VPS33BQ9H267 617 aa26.22■■□□□ 1.79
SCN8A-204ENST00000546961 DPP8Q6V1X1 898 aaPredicted RBP26.21■■□□□ 1.79
SCN8A-204ENST00000546961 MPNDQ8N594 471 aa26.21■■□□□ 1.79
SCN8A-204ENST00000546961 AIDAQ96BJ3 306 aa26.21■■□□□ 1.79
SCN8A-204ENST00000546961 ZNRF3Q9ULT6 936 aa26.21■■□□□ 1.79
SCN8A-204ENST00000546961 ABT1Q9ULW3 272 aaKnown RBP26.21■■□□□ 1.79
SCN8A-204ENST00000546961 CHPF2Q9P2E5 772 aa26.2■■□□□ 1.78
SCN8A-204ENST00000546961 ADAMTS8Q9UP79 889 aa26.2■■□□□ 1.78
SCN8A-204ENST00000546961 SH3TC1Q8TE82 1336 aa26.19■■□□□ 1.78
SCN8A-204ENST00000546961 FMR1Q06787 632 aaKnown RBP eCLIP26.19■■□□□ 1.78
SCN8A-204ENST00000546961 CXCL9Q07325 125 aa26.19■■□□□ 1.78
SCN8A-204ENST00000546961 USP50Q70EL3 339 aaPredicted RBP26.19■■□□□ 1.78
SCN8A-204ENST00000546961 RTFDC1Q9BY42 306 aaPredicted RBP26.19■■□□□ 1.78
SCN8A-204ENST00000546961 RASSF10A6NK89 507 aa26.18■■□□□ 1.78
SCN8A-204ENST00000546961 HDGFL1Q5TGJ6 251 aa26.18■■□□□ 1.78
SCN8A-204ENST00000546961 ANKRD13DQ6ZTN6 518 aa26.17■■□□□ 1.78
SCN8A-204ENST00000546961 CTCFP49711 727 aaPredicted RBP26.16■■□□□ 1.78
SCN8A-204ENST00000546961 GRAPQ13588 217 aa26.16■■□□□ 1.78
SCN8A-204ENST00000546961 PLBD2Q8NHP8 589 aa26.16■■□□□ 1.78
SCN8A-204ENST00000546961 GRAPLQ8TC17 118 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms