RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 RPGRQ92834 1020 aaKnown RBP15.6■□□□□ 0.09
PTPN6-219ENST00000542848 ZBTB3Q9H5J0 574 aa15.6■□□□□ 0.09
PTPN6-219ENST00000542848 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
PTPN6-219ENST00000542848 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
PTPN6-219ENST00000542848 ZNF541Q9H0D2 1346 aa15.6■□□□□ 0.09
PTPN6-219ENST00000542848 PPP1R42Q7Z4L9 355 aa15.59■□□□□ 0.09
PTPN6-219ENST00000542848 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
PTPN6-219ENST00000542848 CRAMP1Q96RY5 1269 aa15.59■□□□□ 0.09
PTPN6-219ENST00000542848 HACL1Q9UJ83 578 aa15.59■□□□□ 0.09
PTPN6-219ENST00000542848 PASKQ96RG2 1323 aa15.59■□□□□ 0.09
PTPN6-219ENST00000542848 NTSR2O95665 410 aa15.58■□□□□ 0.08
PTPN6-219ENST00000542848 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
PTPN6-219ENST00000542848 PDIA6Q15084 440 aa15.58■□□□□ 0.08
PTPN6-219ENST00000542848 PARP10Q53GL7 1025 aa15.58■□□□□ 0.08
PTPN6-219ENST00000542848 LRP10Q7Z4F1 713 aa15.58■□□□□ 0.08
PTPN6-219ENST00000542848 GPC2Q8N158 579 aa15.58■□□□□ 0.08
PTPN6-219ENST00000542848 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
PTPN6-219ENST00000542848 TRPM7Q96QT4 1865 aa15.57■□□□□ 0.08
PTPN6-219ENST00000542848 HSPA1AP0DMV8 641 aaKnown RBP15.57■□□□□ 0.08
PTPN6-219ENST00000542848 HSPA1BP0DMV9 641 aaKnown RBP15.57■□□□□ 0.08
PTPN6-219ENST00000542848 EIF2S2P20042 333 aaKnown RBP15.57■□□□□ 0.08
PTPN6-219ENST00000542848 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
PTPN6-219ENST00000542848 PNMA8AQ86V59 439 aaPredicted RBP15.57■□□□□ 0.08
PTPN6-219ENST00000542848 ITGBL1O95965 494 aaPredicted RBP15.56■□□□□ 0.08
PTPN6-219ENST00000542848 EPHX2P34913 555 aa15.56■□□□□ 0.08
PTPN6-219ENST00000542848 SLC10A5Q5PT55 438 aa15.56■□□□□ 0.08
PTPN6-219ENST00000542848 NLRP3Q96P20 1036 aa15.56■□□□□ 0.08
PTPN6-219ENST00000542848 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
PTPN6-219ENST00000542848 TAF1P21675 1872 aa15.56■□□□□ 0.08
PTPN6-219ENST00000542848 EIF6P56537 245 aaKnown RBP15.55■□□□□ 0.08
PTPN6-219ENST00000542848 EAPPQ56P03 285 aaPredicted RBP15.55■□□□□ 0.08
PTPN6-219ENST00000542848 UTP14AQ9BVJ6 771 aaKnown RBP15.55■□□□□ 0.08
PTPN6-219ENST00000542848 MKRN1Q9UHC7 482 aaKnown RBP15.55■□□□□ 0.08
PTPN6-219ENST00000542848 COL4A5P29400 1685 aa15.54■□□□□ 0.08
PTPN6-219ENST00000542848 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
PTPN6-219ENST00000542848 TMEM88BA6NKF7 163 aa15.54■□□□□ 0.08
PTPN6-219ENST00000542848 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
PTPN6-219ENST00000542848 CNTNAP1P78357 1384 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 TNS4Q8IZW8 715 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 LARGE2Q8N3Y3 721 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
PTPN6-219ENST00000542848 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 LTBP1Q14766 1721 aa15.53■□□□□ 0.08
PTPN6-219ENST00000542848 MYBBP1AQ9BQG0 1328 aaKnown RBP15.52■□□□□ 0.08
PTPN6-219ENST00000542848 CHL1O00533 1208 aa15.52■□□□□ 0.08
PTPN6-219ENST00000542848 ANXA1P04083 346 aa15.52■□□□□ 0.08
PTPN6-219ENST00000542848 COPS6Q7L5N1 327 aa15.52■□□□□ 0.08
PTPN6-219ENST00000542848 CNTROBQ8N137 903 aa15.52■□□□□ 0.08
PTPN6-219ENST00000542848 ATP6V0A2Q9Y487 856 aa15.52■□□□□ 0.08
PTPN6-219ENST00000542848 GJA3Q9Y6H8 435 aa15.52■□□□□ 0.08
PTPN6-219ENST00000542848 TCERG1O14776 1098 aaKnown RBP15.51■□□□□ 0.07
PTPN6-219ENST00000542848 LMOD1P29536 600 aaPredicted RBP15.51■□□□□ 0.07
PTPN6-219ENST00000542848 TCIRG1Q13488 830 aa15.51■□□□□ 0.07
PTPN6-219ENST00000542848 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
PTPN6-219ENST00000542848 RUNDC1Q96C34 613 aa15.51■□□□□ 0.07
PTPN6-219ENST00000542848 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
PTPN6-219ENST00000542848 BBOX1O75936 387 aa15.5■□□□□ 0.07
PTPN6-219ENST00000542848 AIMP1Q12904 312 aaKnown RBP15.5■□□□□ 0.07
PTPN6-219ENST00000542848 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
PTPN6-219ENST00000542848 MAP1SQ66K74 1059 aaPredicted RBP15.5■□□□□ 0.07
PTPN6-219ENST00000542848 NLRP10Q86W26 655 aa15.5■□□□□ 0.07
PTPN6-219ENST00000542848 XAGE3Q8WTP9 111 aa15.5■□□□□ 0.07
PTPN6-219ENST00000542848 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
PTPN6-219ENST00000542848 DDX60Q8IY21 1712 aaKnown RBP15.5■□□□□ 0.07
PTPN6-219ENST00000542848 ABCC4O15439 1325 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 NIM1KQ8IY84 436 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 CCDC146Q8IYE0 955 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 RTFDC1Q9BY42 306 aaPredicted RBP15.49■□□□□ 0.07
PTPN6-219ENST00000542848 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
PTPN6-219ENST00000542848 POLR2AP24928 1970 aaKnown RBP15.48■□□□□ 0.07
PTPN6-219ENST00000542848 EPS15P42566 896 aa15.48■□□□□ 0.07
PTPN6-219ENST00000542848 VEGFBP49765 207 aa15.48■□□□□ 0.07
PTPN6-219ENST00000542848 SCNN1DP51172 638 aa15.48■□□□□ 0.07
PTPN6-219ENST00000542848 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN6-219ENST00000542848 USP50Q70EL3 339 aaPredicted RBP15.48■□□□□ 0.07
PTPN6-219ENST00000542848 TRMT112Q9UI30 125 aaKnown RBP15.48■□□□□ 0.07
PTPN6-219ENST00000542848 SH3TC1Q8TE82 1336 aa15.47■□□□□ 0.07
PTPN6-219ENST00000542848 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
PTPN6-219ENST00000542848 LRRC37AA6NMS7 1700 aa15.47■□□□□ 0.07
PTPN6-219ENST00000542848 HOXB7P09629 217 aa15.47■□□□□ 0.07
PTPN6-219ENST00000542848 HCLS1P14317 486 aaPredicted RBP15.47■□□□□ 0.07
PTPN6-219ENST00000542848 DEFB115Q30KQ5 88 aa15.47■□□□□ 0.07
PTPN6-219ENST00000542848 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
PTPN6-219ENST00000542848 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
PTPN6-219ENST00000542848 LAS1LQ9Y4W2 734 aaKnown RBP15.47■□□□□ 0.07
PTPN6-219ENST00000542848 AOC3Q16853 763 aa15.46■□□□□ 0.07
PTPN6-219ENST00000542848 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
PTPN6-219ENST00000542848 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
PTPN6-219ENST00000542848 MPNDQ8N594 471 aa15.46■□□□□ 0.07
PTPN6-219ENST00000542848 PLBD2Q8NHP8 589 aa15.46■□□□□ 0.07
PTPN6-219ENST00000542848 ZNRF3Q9ULT6 936 aa15.46■□□□□ 0.07
PTPN6-219ENST00000542848 ADAMTS8Q9UP79 889 aa15.46■□□□□ 0.07
PTPN6-219ENST00000542848 FOXN1O15353 648 aa15.45■□□□□ 0.06
PTPN6-219ENST00000542848 GRAPQ13588 217 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms