RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 FZD9O00144 591 aa17.36■□□□□ 0.37
PRPF19-206ENST00000541371 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
PRPF19-206ENST00000541371 PARP10Q53GL7 1025 aa17.36■□□□□ 0.37
PRPF19-206ENST00000541371 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
PRPF19-206ENST00000541371 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
PRPF19-206ENST00000541371 HSPA1AP0DMV8 641 aaKnown RBP17.35■□□□□ 0.37
PRPF19-206ENST00000541371 HSPA1BP0DMV9 641 aaKnown RBP17.35■□□□□ 0.37
PRPF19-206ENST00000541371 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
PRPF19-206ENST00000541371 GRIPAP1Q4V328 841 aa17.35■□□□□ 0.37
PRPF19-206ENST00000541371 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
PRPF19-206ENST00000541371 CAPN15O75808 1086 aa17.34■□□□□ 0.37
PRPF19-206ENST00000541371 NTSR2O95665 410 aa17.34■□□□□ 0.37
PRPF19-206ENST00000541371 EPHX2P34913 555 aa17.34■□□□□ 0.37
PRPF19-206ENST00000541371 PDIA6Q15084 440 aa17.34■□□□□ 0.37
PRPF19-206ENST00000541371 NLRP3Q96P20 1036 aa17.34■□□□□ 0.37
PRPF19-206ENST00000541371 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
PRPF19-206ENST00000541371 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
PRPF19-206ENST00000541371 SCN4AP35499 1836 aa17.33■□□□□ 0.37
PRPF19-206ENST00000541371 RIC1Q4ADV7 1423 aa17.33■□□□□ 0.36
PRPF19-206ENST00000541371 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
PRPF19-206ENST00000541371 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.36
PRPF19-206ENST00000541371 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
PRPF19-206ENST00000541371 GPC2Q8N158 579 aa17.33■□□□□ 0.36
PRPF19-206ENST00000541371 UTP14AQ9BVJ6 771 aaKnown RBP17.33■□□□□ 0.36
PRPF19-206ENST00000541371 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
PRPF19-206ENST00000541371 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
PRPF19-206ENST00000541371 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
PRPF19-206ENST00000541371 ANXA1P04083 346 aa17.32■□□□□ 0.36
PRPF19-206ENST00000541371 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
PRPF19-206ENST00000541371 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
PRPF19-206ENST00000541371 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
PRPF19-206ENST00000541371 LRP10Q7Z4F1 713 aa17.32■□□□□ 0.36
PRPF19-206ENST00000541371 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
PRPF19-206ENST00000541371 AIMP1Q12904 312 aaKnown RBP17.31■□□□□ 0.36
PRPF19-206ENST00000541371 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
PRPF19-206ENST00000541371 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
PRPF19-206ENST00000541371 TNS4Q8IZW8 715 aa17.31■□□□□ 0.36
PRPF19-206ENST00000541371 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
PRPF19-206ENST00000541371 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
PRPF19-206ENST00000541371 GJA3Q9Y6H8 435 aa17.31■□□□□ 0.36
PRPF19-206ENST00000541371 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
PRPF19-206ENST00000541371 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
PRPF19-206ENST00000541371 ITGBL1O95965 494 aaPredicted RBP17.3■□□□□ 0.36
PRPF19-206ENST00000541371 HSP90AB3PQ58FF7 597 aa17.3■□□□□ 0.36
PRPF19-206ENST00000541371 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
PRPF19-206ENST00000541371 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
PRPF19-206ENST00000541371 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
PRPF19-206ENST00000541371 LMOD1P29536 600 aaPredicted RBP17.29■□□□□ 0.36
PRPF19-206ENST00000541371 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRPF19-206ENST00000541371 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
PRPF19-206ENST00000541371 CHL1O00533 1208 aa17.28■□□□□ 0.36
PRPF19-206ENST00000541371 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
PRPF19-206ENST00000541371 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
PRPF19-206ENST00000541371 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
PRPF19-206ENST00000541371 RUNDC1Q96C34 613 aa17.28■□□□□ 0.36
PRPF19-206ENST00000541371 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
PRPF19-206ENST00000541371 CNTNAP1P78357 1384 aa17.28■□□□□ 0.36
PRPF19-206ENST00000541371 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
PRPF19-206ENST00000541371 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
PRPF19-206ENST00000541371 NLRP10Q86W26 655 aa17.27■□□□□ 0.36
PRPF19-206ENST00000541371 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
PRPF19-206ENST00000541371 BBOX1O75936 387 aa17.26■□□□□ 0.35
PRPF19-206ENST00000541371 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
PRPF19-206ENST00000541371 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
PRPF19-206ENST00000541371 TRMT112Q9UI30 125 aaKnown RBP17.26■□□□□ 0.35
PRPF19-206ENST00000541371 ABCC4O15439 1325 aa17.25■□□□□ 0.35
PRPF19-206ENST00000541371 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
PRPF19-206ENST00000541371 SUPT20HQ8NEM7 779 aa17.25■□□□□ 0.35
PRPF19-206ENST00000541371 VPS33BQ9H267 617 aa17.25■□□□□ 0.35
PRPF19-206ENST00000541371 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
PRPF19-206ENST00000541371 COL4A5P29400 1685 aa17.25■□□□□ 0.35
PRPF19-206ENST00000541371 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 EPS15P42566 896 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 VEGFBP49765 207 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 SCNN1DP51172 638 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 AOC3Q16853 763 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
PRPF19-206ENST00000541371 SP8Q8IXZ3 490 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 CHPF2Q9P2E5 772 aa17.24■□□□□ 0.35
PRPF19-206ENST00000541371 HDGFL1Q5TGJ6 251 aa17.23■□□□□ 0.35
PRPF19-206ENST00000541371 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
PRPF19-206ENST00000541371 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
PRPF19-206ENST00000541371 ADAMTSL1Q8N6G6 1762 aa17.23■□□□□ 0.35
PRPF19-206ENST00000541371 HOXB7P09629 217 aa17.22■□□□□ 0.35
PRPF19-206ENST00000541371 DEFB115Q30KQ5 88 aa17.22■□□□□ 0.35
PRPF19-206ENST00000541371 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
PRPF19-206ENST00000541371 MPNDQ8N594 471 aa17.22■□□□□ 0.35
PRPF19-206ENST00000541371 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
PRPF19-206ENST00000541371 RTFDC1Q9BY42 306 aaPredicted RBP17.22■□□□□ 0.35
PRPF19-206ENST00000541371 ZNRF3Q9ULT6 936 aa17.22■□□□□ 0.35
PRPF19-206ENST00000541371 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
PRPF19-206ENST00000541371 GRAPQ13588 217 aa17.21■□□□□ 0.35
PRPF19-206ENST00000541371 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
PRPF19-206ENST00000541371 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
PRPF19-206ENST00000541371 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
PRPF19-206ENST00000541371 DBF4Q9UBU7 674 aaPredicted RBP17.21■□□□□ 0.35
PRPF19-206ENST00000541371 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
PRPF19-206ENST00000541371 FOXN1O15353 648 aa17.2■□□□□ 0.34
PRPF19-206ENST00000541371 CXCL9Q07325 125 aa17.2■□□□□ 0.34
PRPF19-206ENST00000541371 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms