RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 COL4A5P29400 1685 aa22.66■■□□□ 1.22
FERMT3-203ENST00000540554 HSPA1AP0DMV8 641 aaKnown RBP22.66■■□□□ 1.22
FERMT3-203ENST00000540554 HSPA1BP0DMV9 641 aaKnown RBP22.66■■□□□ 1.22
FERMT3-203ENST00000540554 COL13A1Q5TAT6 717 aaPredicted RBP22.66■■□□□ 1.22
FERMT3-203ENST00000540554 PPP1R42Q7Z4L9 355 aa22.66■■□□□ 1.22
FERMT3-203ENST00000540554 JDP2Q8WYK2 163 aa22.66■■□□□ 1.22
FERMT3-203ENST00000540554 RBM17Q96I25 401 aaKnown RBP22.66■■□□□ 1.22
FERMT3-203ENST00000540554 CREBZFQ9NS37 354 aa22.66■■□□□ 1.22
FERMT3-203ENST00000540554 CLEC11AQ9Y240 323 aa22.66■■□□□ 1.22
FERMT3-203ENST00000540554 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
FERMT3-203ENST00000540554 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
FERMT3-203ENST00000540554 NTSR2O95665 410 aa22.65■■□□□ 1.22
FERMT3-203ENST00000540554 ZNF34Q8IZ26 560 aa22.65■■□□□ 1.22
FERMT3-203ENST00000540554 PSMD1Q99460 953 aa22.65■■□□□ 1.22
FERMT3-203ENST00000540554 MKRN1Q9UHC7 482 aaKnown RBP22.65■■□□□ 1.22
FERMT3-203ENST00000540554 LTBP1Q14766 1721 aa22.65■■□□□ 1.22
FERMT3-203ENST00000540554 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
FERMT3-203ENST00000540554 PPEF1O14829 653 aaPredicted RBP22.64■■□□□ 1.21
FERMT3-203ENST00000540554 ANXA1P04083 346 aa22.64■■□□□ 1.21
FERMT3-203ENST00000540554 TMPOP42166 694 aaKnown RBP22.64■■□□□ 1.21
FERMT3-203ENST00000540554 CC2D2BQ6DHV5 1058 aa22.64■■□□□ 1.21
FERMT3-203ENST00000540554 EPHX2P34913 555 aa22.63■■□□□ 1.21
FERMT3-203ENST00000540554 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
FERMT3-203ENST00000540554 PARP10Q53GL7 1025 aa22.63■■□□□ 1.21
FERMT3-203ENST00000540554 CCDC146Q8IYE0 955 aa22.63■■□□□ 1.21
FERMT3-203ENST00000540554 NECTIN2Q92692 538 aa22.63■■□□□ 1.21
FERMT3-203ENST00000540554 MYBBP1AQ9BQG0 1328 aaKnown RBP22.62■■□□□ 1.21
FERMT3-203ENST00000540554 FZD9O00144 591 aa22.62■■□□□ 1.21
FERMT3-203ENST00000540554 HOXA10P31260 410 aaPredicted RBP22.62■■□□□ 1.21
FERMT3-203ENST00000540554 EIF6P56537 245 aaKnown RBP22.62■■□□□ 1.21
FERMT3-203ENST00000540554 PROSER3Q2NL68 480 aa22.62■■□□□ 1.21
FERMT3-203ENST00000540554 GJA3Q9Y6H8 435 aa22.62■■□□□ 1.21
FERMT3-203ENST00000540554 C3orf67Q6ZVT6 689 aa22.61■■□□□ 1.21
FERMT3-203ENST00000540554 TNS4Q8IZW8 715 aa22.61■■□□□ 1.21
FERMT3-203ENST00000540554 GPC2Q8N158 579 aa22.61■■□□□ 1.21
FERMT3-203ENST00000540554 LARGE2Q8N3Y3 721 aa22.61■■□□□ 1.21
FERMT3-203ENST00000540554 CRAMP1Q96RY5 1269 aa22.61■■□□□ 1.21
FERMT3-203ENST00000540554 BABAM1Q9NWV8 329 aa22.61■■□□□ 1.21
FERMT3-203ENST00000540554 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
FERMT3-203ENST00000540554 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
FERMT3-203ENST00000540554 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
FERMT3-203ENST00000540554 PDIA6Q15084 440 aa22.6■■□□□ 1.21
FERMT3-203ENST00000540554 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
FERMT3-203ENST00000540554 UTP14AQ9BVJ6 771 aaKnown RBP22.6■■□□□ 1.21
FERMT3-203ENST00000540554 TMX4Q9H1E5 349 aaPredicted RBP22.6■■□□□ 1.21
FERMT3-203ENST00000540554 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
FERMT3-203ENST00000540554 WDR43Q15061 677 aaKnown RBP eCLIP22.59■■□□□ 1.21
FERMT3-203ENST00000540554 GRIPAP1Q4V328 841 aa22.59■■□□□ 1.21
FERMT3-203ENST00000540554 SLC51AQ86UW1 340 aa22.59■■□□□ 1.21
FERMT3-203ENST00000540554 PNMA8AQ86V59 439 aaPredicted RBP22.59■■□□□ 1.21
FERMT3-203ENST00000540554 CAPN15O75808 1086 aa22.58■■□□□ 1.21
FERMT3-203ENST00000540554 LMOD1P29536 600 aaPredicted RBP22.58■■□□□ 1.21
FERMT3-203ENST00000540554 LRP10Q7Z4F1 713 aa22.58■■□□□ 1.21
FERMT3-203ENST00000540554 CNTNAP1P78357 1384 aa22.58■■□□□ 1.21
FERMT3-203ENST00000540554 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
FERMT3-203ENST00000540554 HSP90AB3PQ58FF7 597 aa22.57■■□□□ 1.2
FERMT3-203ENST00000540554 NIM1KQ8IY84 436 aa22.57■■□□□ 1.2
FERMT3-203ENST00000540554 XAGE3Q8WTP9 111 aa22.57■■□□□ 1.2
FERMT3-203ENST00000540554 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
FERMT3-203ENST00000540554 PPIP5K2O43314 1243 aa22.56■■□□□ 1.2
FERMT3-203ENST00000540554 MAP1SQ66K74 1059 aaPredicted RBP22.56■■□□□ 1.2
FERMT3-203ENST00000540554 COPS6Q7L5N1 327 aa22.56■■□□□ 1.2
FERMT3-203ENST00000540554 PCNTO95613 3336 aa22.56■■□□□ 1.2
FERMT3-203ENST00000540554 ABCC4O15439 1325 aa22.56■■□□□ 1.2
FERMT3-203ENST00000540554 ITGBL1O95965 494 aaPredicted RBP22.55■■□□□ 1.2
FERMT3-203ENST00000540554 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
FERMT3-203ENST00000540554 RUNDC1Q96C34 613 aa22.54■■□□□ 1.2
FERMT3-203ENST00000540554 AOC3Q16853 763 aa22.53■■□□□ 1.2
FERMT3-203ENST00000540554 NLRP10Q86W26 655 aa22.53■■□□□ 1.2
FERMT3-203ENST00000540554 CNTROBQ8N137 903 aa22.53■■□□□ 1.2
FERMT3-203ENST00000540554 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
FERMT3-203ENST00000540554 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
FERMT3-203ENST00000540554 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
FERMT3-203ENST00000540554 HCLS1P14317 486 aaPredicted RBP22.52■■□□□ 1.2
FERMT3-203ENST00000540554 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
FERMT3-203ENST00000540554 ZNF428Q96B54 188 aa22.52■■□□□ 1.2
FERMT3-203ENST00000540554 CHPF2Q9P2E5 772 aa22.52■■□□□ 1.2
FERMT3-203ENST00000540554 HDGFL1Q5TGJ6 251 aa22.51■■□□□ 1.19
FERMT3-203ENST00000540554 SUPT20HQ8NEM7 779 aa22.51■■□□□ 1.19
FERMT3-203ENST00000540554 SH3TC1Q8TE82 1336 aa22.51■■□□□ 1.19
FERMT3-203ENST00000540554 POLR2AP24928 1970 aaKnown RBP22.5■■□□□ 1.19
FERMT3-203ENST00000540554 CHL1O00533 1208 aa22.5■■□□□ 1.19
FERMT3-203ENST00000540554 VEGFBP49765 207 aa22.5■■□□□ 1.19
FERMT3-203ENST00000540554 SCNN1DP51172 638 aa22.5■■□□□ 1.19
FERMT3-203ENST00000540554 TCIRG1Q13488 830 aa22.5■■□□□ 1.19
FERMT3-203ENST00000540554 DDX46Q7L014 1031 aaKnown RBP22.5■■□□□ 1.19
FERMT3-203ENST00000540554 TRIM35Q9UPQ4 493 aa22.5■■□□□ 1.19
FERMT3-203ENST00000540554 EPS15P42566 896 aa22.49■■□□□ 1.19
FERMT3-203ENST00000540554 DPP8Q6V1X1 898 aaPredicted RBP22.49■■□□□ 1.19
FERMT3-203ENST00000540554 AIDAQ96BJ3 306 aa22.49■■□□□ 1.19
FERMT3-203ENST00000540554 ABT1Q9ULW3 272 aaKnown RBP22.49■■□□□ 1.19
FERMT3-203ENST00000540554 SPEF2Q9C093 1822 aa22.49■■□□□ 1.19
FERMT3-203ENST00000540554 MYH3P11055 1940 aa22.49■■□□□ 1.19
FERMT3-203ENST00000540554 DUOX1Q9NRD9 1551 aa22.48■■□□□ 1.19
FERMT3-203ENST00000540554 THSD7BQ9C0I4 1608 aa22.47■■□□□ 1.19
FERMT3-203ENST00000540554 BBOX1O75936 387 aa22.47■■□□□ 1.19
FERMT3-203ENST00000540554 MPNDQ8N594 471 aa22.47■■□□□ 1.19
FERMT3-203ENST00000540554 ADAMTS8Q9UP79 889 aa22.47■■□□□ 1.19
FERMT3-203ENST00000540554 FOXN1O15353 648 aa22.46■■□□□ 1.19
FERMT3-203ENST00000540554 GRAPQ13588 217 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms