RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 RIPK4P57078 832 aa14.34□□□□□ -0.11
DDB1-214ENST00000539426 PDIA6Q15084 440 aa14.34□□□□□ -0.11
DDB1-214ENST00000539426 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
DDB1-214ENST00000539426 GIGYF2Q6Y7W6 1299 aaKnown RBP14.34□□□□□ -0.11
DDB1-214ENST00000539426 C3orf67Q6ZVT6 689 aa14.34□□□□□ -0.11
DDB1-214ENST00000539426 PNNQ9H307 717 aaKnown RBP14.34□□□□□ -0.11
DDB1-214ENST00000539426 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
DDB1-214ENST00000539426 RNF123Q5XPI4 1314 aa14.34□□□□□ -0.11
DDB1-214ENST00000539426 LTBP1Q14766 1721 aa14.33□□□□□ -0.12
DDB1-214ENST00000539426 LAMB2P55268 1798 aa14.33□□□□□ -0.12
DDB1-214ENST00000539426 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
DDB1-214ENST00000539426 HOXA10P31260 410 aaPredicted RBP14.33□□□□□ -0.12
DDB1-214ENST00000539426 RPGRQ92834 1020 aaKnown RBP14.33□□□□□ -0.12
DDB1-214ENST00000539426 PSMD1Q99460 953 aa14.33□□□□□ -0.12
DDB1-214ENST00000539426 MKRN1Q9UHC7 482 aaKnown RBP14.33□□□□□ -0.12
DDB1-214ENST00000539426 HACL1Q9UJ83 578 aa14.33□□□□□ -0.12
DDB1-214ENST00000539426 EAPPQ56P03 285 aaPredicted RBP14.32□□□□□ -0.12
DDB1-214ENST00000539426 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
DDB1-214ENST00000539426 EPHX2P34913 555 aa14.31□□□□□ -0.12
DDB1-214ENST00000539426 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
DDB1-214ENST00000539426 RALBP1Q15311 655 aa14.31□□□□□ -0.12
DDB1-214ENST00000539426 TAF1P21675 1872 aa14.3□□□□□ -0.12
DDB1-214ENST00000539426 TCERG1O14776 1098 aaKnown RBP14.3□□□□□ -0.12
DDB1-214ENST00000539426 CC2D2BQ6DHV5 1058 aa14.3□□□□□ -0.12
DDB1-214ENST00000539426 GPC2Q8N158 579 aa14.3□□□□□ -0.12
DDB1-214ENST00000539426 NECTIN2Q92692 538 aa14.3□□□□□ -0.12
DDB1-214ENST00000539426 RBM17Q96I25 401 aaKnown RBP14.3□□□□□ -0.12
DDB1-214ENST00000539426 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
DDB1-214ENST00000539426 CNTNAP1P78357 1384 aa14.3□□□□□ -0.12
DDB1-214ENST00000539426 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
DDB1-214ENST00000539426 KRT24Q2M2I5 525 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 CCDC146Q8IYE0 955 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 TNS4Q8IZW8 715 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
DDB1-214ENST00000539426 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
DDB1-214ENST00000539426 LARGE2Q8N3Y3 721 aa14.28□□□□□ -0.12
DDB1-214ENST00000539426 UTP14AQ9BVJ6 771 aaKnown RBP14.28□□□□□ -0.12
DDB1-214ENST00000539426 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
DDB1-214ENST00000539426 GJA3Q9Y6H8 435 aa14.28□□□□□ -0.12
DDB1-214ENST00000539426 ABCC4O15439 1325 aa14.27□□□□□ -0.12
DDB1-214ENST00000539426 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
DDB1-214ENST00000539426 TMEM88BA6NKF7 163 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 EIF6P56537 245 aaKnown RBP14.27□□□□□ -0.13
DDB1-214ENST00000539426 LMOD3Q0VAK6 560 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 AIMP1Q12904 312 aaKnown RBP14.27□□□□□ -0.13
DDB1-214ENST00000539426 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.13
DDB1-214ENST00000539426 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 SLC10A5Q5PT55 438 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 COPS6Q7L5N1 327 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 XAGE3Q8WTP9 111 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 NLRP3Q96P20 1036 aa14.27□□□□□ -0.13
DDB1-214ENST00000539426 CAPN15O75808 1086 aa14.26□□□□□ -0.13
DDB1-214ENST00000539426 SCNN1DP51172 638 aa14.26□□□□□ -0.13
DDB1-214ENST00000539426 GRIPAP1Q4V328 841 aa14.26□□□□□ -0.13
DDB1-214ENST00000539426 PNMA8AQ86V59 439 aaPredicted RBP14.26□□□□□ -0.13
DDB1-214ENST00000539426 NLRP10Q86W26 655 aa14.26□□□□□ -0.13
DDB1-214ENST00000539426 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
DDB1-214ENST00000539426 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
DDB1-214ENST00000539426 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
DDB1-214ENST00000539426 CHL1O00533 1208 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 PPIP5K2O43314 1243 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
DDB1-214ENST00000539426 EPS15P42566 896 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 VEGFBP49765 207 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 AOC3Q16853 763 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 ATP6V0A2Q9Y487 856 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 TRPM7Q96QT4 1865 aa14.25□□□□□ -0.13
DDB1-214ENST00000539426 FOXN1O15353 648 aa14.24□□□□□ -0.13
DDB1-214ENST00000539426 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
DDB1-214ENST00000539426 NIM1KQ8IY84 436 aa14.24□□□□□ -0.13
DDB1-214ENST00000539426 ZNF428Q96B54 188 aa14.24□□□□□ -0.13
DDB1-214ENST00000539426 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
DDB1-214ENST00000539426 CHPF2Q9P2E5 772 aa14.24□□□□□ -0.13
DDB1-214ENST00000539426 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
DDB1-214ENST00000539426 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.131e-7■■□□□ 13.7
DDB1-214ENST00000539426 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
DDB1-214ENST00000539426 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
DDB1-214ENST00000539426 RTFDC1Q9BY42 306 aaPredicted RBP14.23□□□□□ -0.13
DDB1-214ENST00000539426 TRMT112Q9UI30 125 aaKnown RBP14.23□□□□□ -0.13
DDB1-214ENST00000539426 LAS1LQ9Y4W2 734 aaKnown RBP14.23□□□□□ -0.13
DDB1-214ENST00000539426 LRRC37AA6NMS7 1700 aa14.23□□□□□ -0.13
DDB1-214ENST00000539426 DUOX1Q9NRD9 1551 aa14.22□□□□□ -0.13
DDB1-214ENST00000539426 ADAMTS8Q9UP79 889 aa14.22□□□□□ -0.13
DDB1-214ENST00000539426 COL4A1P02462 1669 aa14.22□□□□□ -0.13
DDB1-214ENST00000539426 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
DDB1-214ENST00000539426 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
DDB1-214ENST00000539426 CXCL9Q07325 125 aa14.21□□□□□ -0.13
DDB1-214ENST00000539426 WDR43Q15061 677 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDB1-214ENST00000539426 HDGFL1Q5TGJ6 251 aa14.21□□□□□ -0.13
DDB1-214ENST00000539426 SP8Q8IXZ3 490 aa14.21□□□□□ -0.13
DDB1-214ENST00000539426 BBOX1O75936 387 aa14.2□□□□□ -0.14
DDB1-214ENST00000539426 GRAPQ13588 217 aa14.2□□□□□ -0.14
DDB1-214ENST00000539426 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
DDB1-214ENST00000539426 DPP8Q6V1X1 898 aaPredicted RBP14.2□□□□□ -0.14
DDB1-214ENST00000539426 MPNDQ8N594 471 aa14.2□□□□□ -0.14
DDB1-214ENST00000539426 GRAPLQ8TC17 118 aaPredicted RBP14.2□□□□□ -0.14
DDB1-214ENST00000539426 TMX4Q9H1E5 349 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms