RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 RPGRQ92834 1020 aaKnown RBP23.25■■□□□ 1.31
RECQL4-207ENST00000534538 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
RECQL4-207ENST00000534538 HACL1Q9UJ83 578 aa23.25■■□□□ 1.31
RECQL4-207ENST00000534538 PASKQ96RG2 1323 aa23.25■■□□□ 1.31
RECQL4-207ENST00000534538 LRP10Q7Z4F1 713 aa23.24■■□□□ 1.31
RECQL4-207ENST00000534538 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
RECQL4-207ENST00000534538 NTSR2O95665 410 aa23.23■■□□□ 1.31
RECQL4-207ENST00000534538 HSPA1AP0DMV8 641 aaKnown RBP23.23■■□□□ 1.31
RECQL4-207ENST00000534538 HSPA1BP0DMV9 641 aaKnown RBP23.23■■□□□ 1.31
RECQL4-207ENST00000534538 PDIA6Q15084 440 aa23.23■■□□□ 1.31
RECQL4-207ENST00000534538 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
RECQL4-207ENST00000534538 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
RECQL4-207ENST00000534538 GPC2Q8N158 579 aa23.23■■□□□ 1.31
RECQL4-207ENST00000534538 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
RECQL4-207ENST00000534538 ITGBL1O95965 494 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-207ENST00000534538 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-207ENST00000534538 PNMA8AQ86V59 439 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-207ENST00000534538 EPHX2P34913 555 aa23.21■■□□□ 1.31
RECQL4-207ENST00000534538 LMOD3Q0VAK6 560 aa23.21■■□□□ 1.31
RECQL4-207ENST00000534538 SLC10A5Q5PT55 438 aa23.21■■□□□ 1.31
RECQL4-207ENST00000534538 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
RECQL4-207ENST00000534538 EAPPQ56P03 285 aaPredicted RBP23.2■■□□□ 1.3
RECQL4-207ENST00000534538 EIF2S2P20042 333 aaKnown RBP23.19■■□□□ 1.3
RECQL4-207ENST00000534538 NLRP3Q96P20 1036 aa23.19■■□□□ 1.3
RECQL4-207ENST00000534538 MKRN1Q9UHC7 482 aaKnown RBP23.19■■□□□ 1.3
RECQL4-207ENST00000534538 EIF6P56537 245 aaKnown RBP23.18■■□□□ 1.3
RECQL4-207ENST00000534538 TNS4Q8IZW8 715 aa23.18■■□□□ 1.3
RECQL4-207ENST00000534538 UTP14AQ9BVJ6 771 aaKnown RBP23.18■■□□□ 1.3
RECQL4-207ENST00000534538 CNTNAP1P78357 1384 aa23.17■■□□□ 1.3
RECQL4-207ENST00000534538 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
RECQL4-207ENST00000534538 TMEM88BA6NKF7 163 aa23.17■■□□□ 1.3
RECQL4-207ENST00000534538 PPEF1O14829 653 aaPredicted RBP23.17■■□□□ 1.3
RECQL4-207ENST00000534538 PROSER3Q2NL68 480 aa23.17■■□□□ 1.3
RECQL4-207ENST00000534538 C3orf67Q6ZVT6 689 aa23.17■■□□□ 1.3
RECQL4-207ENST00000534538 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
RECQL4-207ENST00000534538 VPS33BQ9H267 617 aa23.16■■□□□ 1.3
RECQL4-207ENST00000534538 CHL1O00533 1208 aa23.15■■□□□ 1.3
RECQL4-207ENST00000534538 CNTROBQ8N137 903 aa23.15■■□□□ 1.3
RECQL4-207ENST00000534538 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
RECQL4-207ENST00000534538 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
RECQL4-207ENST00000534538 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.3
RECQL4-207ENST00000534538 HSP90AB3PQ58FF7 597 aa23.14■■□□□ 1.29
RECQL4-207ENST00000534538 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
RECQL4-207ENST00000534538 TMX4Q9H1E5 349 aaPredicted RBP23.14■■□□□ 1.29
RECQL4-207ENST00000534538 ANXA1P04083 346 aa23.13■■□□□ 1.29
RECQL4-207ENST00000534538 DDX21Q9NR30 783 aaKnown RBP eCLIP23.13■■□□□ 1.29
RECQL4-207ENST00000534538 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
RECQL4-207ENST00000534538 COL4A5P29400 1685 aa23.13■■□□□ 1.29
RECQL4-207ENST00000534538 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
RECQL4-207ENST00000534538 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
RECQL4-207ENST00000534538 BBOX1O75936 387 aa23.12■■□□□ 1.29
RECQL4-207ENST00000534538 MAP1SQ66K74 1059 aaPredicted RBP23.12■■□□□ 1.29
RECQL4-207ENST00000534538 XAGE3Q8WTP9 111 aa23.12■■□□□ 1.29
RECQL4-207ENST00000534538 LMOD1P29536 600 aaPredicted RBP23.11■■□□□ 1.29
RECQL4-207ENST00000534538 VEGFBP49765 207 aa23.11■■□□□ 1.29
RECQL4-207ENST00000534538 TCIRG1Q13488 830 aa23.11■■□□□ 1.29
RECQL4-207ENST00000534538 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
RECQL4-207ENST00000534538 RTFDC1Q9BY42 306 aaPredicted RBP23.11■■□□□ 1.29
RECQL4-207ENST00000534538 AIMP1Q12904 312 aaKnown RBP23.1■■□□□ 1.29
RECQL4-207ENST00000534538 SLC51AQ86UW1 340 aa23.1■■□□□ 1.29
RECQL4-207ENST00000534538 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
RECQL4-207ENST00000534538 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
RECQL4-207ENST00000534538 RUNDC1Q96C34 613 aa23.1■■□□□ 1.29
RECQL4-207ENST00000534538 ABCC4O15439 1325 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 SCNN1DP51172 638 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 DDX10Q13206 875 aaKnown RBP23.09■■□□□ 1.29
RECQL4-207ENST00000534538 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 SP8Q8IXZ3 490 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 CCDC146Q8IYE0 955 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 SUPT20HQ8NEM7 779 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 TRIM35Q9UPQ4 493 aa23.09■■□□□ 1.29
RECQL4-207ENST00000534538 RASSF10A6NK89 507 aa23.08■■□□□ 1.29
RECQL4-207ENST00000534538 EPS15P42566 896 aa23.08■■□□□ 1.29
RECQL4-207ENST00000534538 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
RECQL4-207ENST00000534538 TRMT112Q9UI30 125 aaKnown RBP23.08■■□□□ 1.29
RECQL4-207ENST00000534538 HOXB7P09629 217 aa23.07■■□□□ 1.28
RECQL4-207ENST00000534538 HCLS1P14317 486 aaPredicted RBP23.07■■□□□ 1.28
RECQL4-207ENST00000534538 AOC3Q16853 763 aa23.07■■□□□ 1.28
RECQL4-207ENST00000534538 SH3TC1Q8TE82 1336 aa23.07■■□□□ 1.28
RECQL4-207ENST00000534538 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
RECQL4-207ENST00000534538 KRT24Q2M2I5 525 aa23.06■■□□□ 1.28
RECQL4-207ENST00000534538 DEFB115Q30KQ5 88 aa23.06■■□□□ 1.28
RECQL4-207ENST00000534538 ZNRF3Q9ULT6 936 aa23.06■■□□□ 1.28
RECQL4-207ENST00000534538 FOXN1O15353 648 aa23.05■■□□□ 1.28
RECQL4-207ENST00000534538 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
RECQL4-207ENST00000534538 DDX46Q7L014 1031 aaKnown RBP23.05■■□□□ 1.28
RECQL4-207ENST00000534538 MPNDQ8N594 471 aa23.05■■□□□ 1.28
RECQL4-207ENST00000534538 CHPF2Q9P2E5 772 aa23.05■■□□□ 1.28
RECQL4-207ENST00000534538 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
RECQL4-207ENST00000534538 LAS1LQ9Y4W2 734 aaKnown RBP23.05■■□□□ 1.28
RECQL4-207ENST00000534538 LTBP1Q14766 1721 aa23.05■■□□□ 1.28
RECQL4-207ENST00000534538 CAPN15O75808 1086 aa23.04■■□□□ 1.28
RECQL4-207ENST00000534538 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
RECQL4-207ENST00000534538 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
RECQL4-207ENST00000534538 WBP1LQ9NX94 342 aa23.04■■□□□ 1.28
RECQL4-207ENST00000534538 DBF4Q9UBU7 674 aaPredicted RBP23.04■■□□□ 1.28
RECQL4-207ENST00000534538 CXCL9Q07325 125 aa23.03■■□□□ 1.28
RECQL4-207ENST00000534538 GRAPQ13588 217 aa23.03■■□□□ 1.28
RECQL4-207ENST00000534538 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms