RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 CDC42BPAQ5VT25 1732 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 ZGPATQ8N5A5 531 aaKnown RBP9.41□□□□□ -0.9
CTNND1-230ENST00000532245 WDR17Q8IZU2 1322 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 HAND2P61296 217 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 G2E3Q7L622 706 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 ZHX3Q9H4I2 956 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 NUCB2P80303 420 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 SPATA31A3Q5VYP0 1347 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 SIK1P57059 783 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 NAA16Q6N069 864 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-230ENST00000532245 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 ABCA9Q8IUA7 1624 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 TSPY2A6NKD2 308 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 KCNQ3O43525 872 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-230ENST00000532245 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 EVI5LQ96CN4 794 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 BICC1Q9H694 974 aaKnown RBP9.4□□□□□ -0.9
CTNND1-230ENST00000532245 ASAP1Q9ULH1 1129 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 SPATA31E1Q6ZUB1 1445 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 CDKL5O76039 1030 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 ITGA6P23229 1130 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 TXLNAP40222 546 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.9
CTNND1-230ENST00000532245 PDCP20941 246 aa9.4□□□□□ -0.91
CTNND1-230ENST00000532245 RNF41Q9H4P4 317 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-230ENST00000532245 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.91
CTNND1-230ENST00000532245 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-230ENST00000532245 STK38Q15208 465 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 USP6P35125 1406 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 MCM2P49736 904 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 EIF6P56537 245 aaKnown RBP9.39□□□□□ -0.91
CTNND1-230ENST00000532245 SKAP1Q86WV1 359 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 CTCFLQ8NI51 663 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-230ENST00000532245 DDX11Q96FC9 970 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 PLXNC1O60486 1568 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 INSRP06213 1382 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 IFIT3O14879 490 aaKnown RBP9.39□□□□□ -0.91
CTNND1-230ENST00000532245 PDE4BQ07343 736 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 SDF4Q9BRK5 362 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-230ENST00000532245 ARHGAP31Q2M1Z3 1444 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 GOLGA6L3A6NEY3 463 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 GGA1Q9UJY5 639 aa9.39□□□□□ -0.91
CTNND1-230ENST00000532245 SSBP05455 408 aaKnown RBP eCLIP9.38□□□□□ -0.911e-7■■■■■ 26.8
CTNND1-230ENST00000532245 TFCP2Q12800 502 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 KIF1BO60333 1816 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 PDE8AO60658 829 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 SLC9C2Q5TAH2 1124 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 SLC4A4Q9Y6R1 1079 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 TPM1P09493 284 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 USPL1Q5W0Q7 1092 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 IL17REQ8NFR9 667 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 TNNQ9UQP3 1299 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 USP16Q9Y5T5 823 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 TPM3P06753 285 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 EIF4A1P60842 406 aaKnown RBP9.38□□□□□ -0.91
CTNND1-230ENST00000532245 ATP8B2P98198 1209 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 CCDC191Q8NCU4 936 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 UPF3BQ9BZI7 483 aaKnown RBP9.38□□□□□ -0.91
CTNND1-230ENST00000532245 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
CTNND1-230ENST00000532245 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 NOL7Q9UMY1 257 aaKnown RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 LDHBP07195 334 aaKnown RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 CRKLP46109 303 aaKnown RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 ZNF396Q96N95 335 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 PTPRMP28827 1452 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 MYOM2P54296 1465 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 ERBB3P21860 1342 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 TAF5LO75529 589 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 PDE6BP35913 854 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
CTNND1-230ENST00000532245 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 MFSD6Q6ZSS7 791 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 C2CD5Q86YS7 1000 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 EPS15P42566 896 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 CCDC144CPQ8IYA2 1237 aa9.37□□□□□ -0.91
CTNND1-230ENST00000532245 CHL1O00533 1208 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 FIBPO43427 364 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 ALDH1B1P30837 517 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 CUL5Q93034 780 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 TET3O43151 1660 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 USP19O94966 1318 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 TSPY3P0CV98 308 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 TSPY8P0CW00 308 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 CATIPQ7Z7H3 387 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 KLHDC4Q8TBB5 520 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 BABAM1Q9NWV8 329 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms