RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PASKQ96RG2 1323 aa24.3■■□□□ 1.48
SSSCA1-206ENST00000531405 FZD9O00144 591 aa24.29■■□□□ 1.48
SSSCA1-206ENST00000531405 HACL1Q9UJ83 578 aa24.29■■□□□ 1.48
SSSCA1-206ENST00000531405 LTBP1Q14766 1721 aa24.29■■□□□ 1.48
SSSCA1-206ENST00000531405 C3orf67Q6ZVT6 689 aa24.28■■□□□ 1.48
SSSCA1-206ENST00000531405 ZNF34Q8IZ26 560 aa24.28■■□□□ 1.48
SSSCA1-206ENST00000531405 TNS4Q8IZW8 715 aa24.28■■□□□ 1.48
SSSCA1-206ENST00000531405 PSMD1Q99460 953 aa24.28■■□□□ 1.48
SSSCA1-206ENST00000531405 CAPN15O75808 1086 aa24.27■■□□□ 1.48
SSSCA1-206ENST00000531405 NTSR2O95665 410 aa24.27■■□□□ 1.48
SSSCA1-206ENST00000531405 EPHX2P34913 555 aa24.27■■□□□ 1.48
SSSCA1-206ENST00000531405 GIGYF2Q6Y7W6 1299 aaKnown RBP24.27■■□□□ 1.48
SSSCA1-206ENST00000531405 CLEC11AQ9Y240 323 aa24.27■■□□□ 1.48
SSSCA1-206ENST00000531405 TAF1P21675 1872 aa24.27■■□□□ 1.48
SSSCA1-206ENST00000531405 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
SSSCA1-206ENST00000531405 ANXA1P04083 346 aa24.26■■□□□ 1.47
SSSCA1-206ENST00000531405 EIF2S2P20042 333 aaKnown RBP24.26■■□□□ 1.47
SSSCA1-206ENST00000531405 HOXA10P31260 410 aaPredicted RBP24.26■■□□□ 1.47
SSSCA1-206ENST00000531405 RIPK4P57078 832 aa24.26■■□□□ 1.47
SSSCA1-206ENST00000531405 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
SSSCA1-206ENST00000531405 ITGBL1O95965 494 aaPredicted RBP24.25■■□□□ 1.47
SSSCA1-206ENST00000531405 PDIA6Q15084 440 aa24.25■■□□□ 1.47
SSSCA1-206ENST00000531405 PROSER3Q2NL68 480 aa24.25■■□□□ 1.47
SSSCA1-206ENST00000531405 LRP10Q7Z4F1 713 aa24.25■■□□□ 1.47
SSSCA1-206ENST00000531405 JDP2Q8WYK2 163 aa24.25■■□□□ 1.47
SSSCA1-206ENST00000531405 CNTNAP1P78357 1384 aa24.25■■□□□ 1.47
SSSCA1-206ENST00000531405 GPC2Q8N158 579 aa24.24■■□□□ 1.47
SSSCA1-206ENST00000531405 PPEF1O14829 653 aaPredicted RBP24.23■■□□□ 1.47
SSSCA1-206ENST00000531405 CC2D2BQ6DHV5 1058 aa24.23■■□□□ 1.47
SSSCA1-206ENST00000531405 RBM17Q96I25 401 aaKnown RBP24.23■■□□□ 1.47
SSSCA1-206ENST00000531405 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
SSSCA1-206ENST00000531405 MAP1SQ66K74 1059 aaPredicted RBP24.22■■□□□ 1.47
SSSCA1-206ENST00000531405 PPP1R42Q7Z4L9 355 aa24.22■■□□□ 1.47
SSSCA1-206ENST00000531405 NECTIN2Q92692 538 aa24.22■■□□□ 1.47
SSSCA1-206ENST00000531405 CRAMP1Q96RY5 1269 aa24.22■■□□□ 1.47
SSSCA1-206ENST00000531405 TMEM88BA6NKF7 163 aa24.21■■□□□ 1.47
SSSCA1-206ENST00000531405 TMPOP42166 694 aaKnown RBP24.21■■□□□ 1.47
SSSCA1-206ENST00000531405 TRPM7Q96QT4 1865 aa24.21■■□□□ 1.47
SSSCA1-206ENST00000531405 EIF6P56537 245 aaKnown RBP24.2■■□□□ 1.46
SSSCA1-206ENST00000531405 PARP10Q53GL7 1025 aa24.2■■□□□ 1.46
SSSCA1-206ENST00000531405 PNMA8AQ86V59 439 aaPredicted RBP24.2■■□□□ 1.46
SSSCA1-206ENST00000531405 LARGE2Q8N3Y3 721 aa24.2■■□□□ 1.46
SSSCA1-206ENST00000531405 RALBP1Q15311 655 aa24.19■■□□□ 1.46
SSSCA1-206ENST00000531405 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
SSSCA1-206ENST00000531405 CNTROBQ8N137 903 aa24.19■■□□□ 1.46
SSSCA1-206ENST00000531405 UTP14AQ9BVJ6 771 aaKnown RBP24.19■■□□□ 1.46
SSSCA1-206ENST00000531405 VEGFBP49765 207 aa24.18■■□□□ 1.46
SSSCA1-206ENST00000531405 NLRP3Q96P20 1036 aa24.18■■□□□ 1.46
SSSCA1-206ENST00000531405 DDX60Q8IY21 1712 aaKnown RBP24.18■■□□□ 1.46
SSSCA1-206ENST00000531405 AIMP1Q12904 312 aaKnown RBP24.17■■□□□ 1.46
SSSCA1-206ENST00000531405 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
SSSCA1-206ENST00000531405 KRT24Q2M2I5 525 aa24.17■■□□□ 1.46
SSSCA1-206ENST00000531405 ABCC4O15439 1325 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 FOXN1O15353 648 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 SCNN1DP51172 638 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 LMOD3Q0VAK6 560 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 GRIPAP1Q4V328 841 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 COPS6Q7L5N1 327 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 XAGE3Q8WTP9 111 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 BABAM1Q9NWV8 329 aa24.16■■□□□ 1.46
SSSCA1-206ENST00000531405 LMOD1P29536 600 aaPredicted RBP24.15■■□□□ 1.46
SSSCA1-206ENST00000531405 EPS15P42566 896 aa24.15■■□□□ 1.46
SSSCA1-206ENST00000531405 AOC3Q16853 763 aa24.15■■□□□ 1.46
SSSCA1-206ENST00000531405 SLC10A5Q5PT55 438 aa24.15■■□□□ 1.46
SSSCA1-206ENST00000531405 ZNF428Q96B54 188 aa24.15■■□□□ 1.46
SSSCA1-206ENST00000531405 PPIP5K2O43314 1243 aa24.14■■□□□ 1.45
SSSCA1-206ENST00000531405 HCLS1P14317 486 aaPredicted RBP24.14■■□□□ 1.45
SSSCA1-206ENST00000531405 NIM1KQ8IY84 436 aa24.14■■□□□ 1.45
SSSCA1-206ENST00000531405 ATP6V0A2Q9Y487 856 aa24.14■■□□□ 1.45
SSSCA1-206ENST00000531405 NLRP10Q86W26 655 aa24.13■■□□□ 1.45
SSSCA1-206ENST00000531405 LAS1LQ9Y4W2 734 aaKnown RBP24.13■■□□□ 1.45
SSSCA1-206ENST00000531405 FMR1Q06787 632 aaKnown RBP eCLIP24.12■■□□□ 1.45
SSSCA1-206ENST00000531405 DDX10Q13206 875 aaKnown RBP24.12■■□□□ 1.45
SSSCA1-206ENST00000531405 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
SSSCA1-206ENST00000531405 LRRC37AA6NMS7 1700 aa24.11■■□□□ 1.45
SSSCA1-206ENST00000531405 HSP90AB3PQ58FF7 597 aa24.11■■□□□ 1.45
SSSCA1-206ENST00000531405 TMX4Q9H1E5 349 aaPredicted RBP24.11■■□□□ 1.45
SSSCA1-206ENST00000531405 RASSF10A6NK89 507 aa24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 CHL1O00533 1208 aa24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 TCIRG1Q13488 830 aa24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 DDX21Q9NR30 783 aaKnown RBP eCLIP24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 CHPF2Q9P2E5 772 aa24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 TRMT112Q9UI30 125 aaKnown RBP24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 TRIM35Q9UPQ4 493 aa24.1■■□□□ 1.45
SSSCA1-206ENST00000531405 DEFB115Q30KQ5 88 aa24.09■■□□□ 1.45
SSSCA1-206ENST00000531405 ABT1Q9ULW3 272 aaKnown RBP24.09■■□□□ 1.45
SSSCA1-206ENST00000531405 DUOX1Q9NRD9 1551 aa24.08■■□□□ 1.45
SSSCA1-206ENST00000531405 AIDAQ96BJ3 306 aa24.08■■□□□ 1.45
SSSCA1-206ENST00000531405 SH3TC1Q8TE82 1336 aa24.08■■□□□ 1.44
SSSCA1-206ENST00000531405 CXCL9Q07325 125 aa24.07■■□□□ 1.44
SSSCA1-206ENST00000531405 DPP8Q6V1X1 898 aaPredicted RBP24.07■■□□□ 1.44
SSSCA1-206ENST00000531405 USP50Q70EL3 339 aaPredicted RBP24.07■■□□□ 1.44
SSSCA1-206ENST00000531405 SP8Q8IXZ3 490 aa24.07■■□□□ 1.44
SSSCA1-206ENST00000531405 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
SSSCA1-206ENST00000531405 RTFDC1Q9BY42 306 aaPredicted RBP24.07■■□□□ 1.44
SSSCA1-206ENST00000531405 THSD7BQ9C0I4 1608 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 COL4A1P02462 1669 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 TRAF5O00463 557 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 BBOX1O75936 387 aa24.06■■□□□ 1.44
SSSCA1-206ENST00000531405 WDR43Q15061 677 aaKnown RBP eCLIP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms