RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 ZNF34Q8IZ26 560 aa29.45■■■□□ 2.31
PACSIN3-207ENST00000530513 RPGRQ92834 1020 aaKnown RBP29.45■■■□□ 2.31
PACSIN3-207ENST00000530513 PSMD1Q99460 953 aa29.45■■■□□ 2.31
PACSIN3-207ENST00000530513 PASKQ96RG2 1323 aa29.45■■■□□ 2.3
PACSIN3-207ENST00000530513 FZD9O00144 591 aa29.44■■■□□ 2.3
PACSIN3-207ENST00000530513 GIGYF2Q6Y7W6 1299 aaKnown RBP29.44■■■□□ 2.3
PACSIN3-207ENST00000530513 C3orf67Q6ZVT6 689 aa29.44■■■□□ 2.3
PACSIN3-207ENST00000530513 RNF123Q5XPI4 1314 aa29.44■■■□□ 2.3
PACSIN3-207ENST00000530513 HOXA10P31260 410 aaPredicted RBP29.43■■■□□ 2.3
PACSIN3-207ENST00000530513 RIPK4P57078 832 aa29.43■■■□□ 2.3
PACSIN3-207ENST00000530513 PDIA6Q15084 440 aa29.43■■■□□ 2.3
PACSIN3-207ENST00000530513 MKRN1Q9UHC7 482 aaKnown RBP29.43■■■□□ 2.3
PACSIN3-207ENST00000530513 HACL1Q9UJ83 578 aa29.43■■■□□ 2.3
PACSIN3-207ENST00000530513 PROSER3Q2NL68 480 aa29.42■■■□□ 2.3
PACSIN3-207ENST00000530513 EAPPQ56P03 285 aaPredicted RBP29.42■■■□□ 2.3
PACSIN3-207ENST00000530513 ANXA1P04083 346 aa29.41■■■□□ 2.3
PACSIN3-207ENST00000530513 EIF2S2P20042 333 aaKnown RBP29.4■■■□□ 2.3
PACSIN3-207ENST00000530513 EPHX2P34913 555 aa29.4■■■□□ 2.3
PACSIN3-207ENST00000530513 RALBP1Q15311 655 aa29.39■■■□□ 2.3
PACSIN3-207ENST00000530513 CC2D2BQ6DHV5 1058 aa29.39■■■□□ 2.3
PACSIN3-207ENST00000530513 GPC2Q8N158 579 aa29.39■■■□□ 2.3
PACSIN3-207ENST00000530513 CNTNAP1P78357 1384 aa29.39■■■□□ 2.29
PACSIN3-207ENST00000530513 PPEF1O14829 653 aaPredicted RBP29.38■■■□□ 2.29
PACSIN3-207ENST00000530513 TMPOP42166 694 aaKnown RBP29.38■■■□□ 2.29
PACSIN3-207ENST00000530513 ITGBL1O95965 494 aaPredicted RBP29.37■■■□□ 2.29
PACSIN3-207ENST00000530513 PARP10Q53GL7 1025 aa29.37■■■□□ 2.29
PACSIN3-207ENST00000530513 TNS4Q8IZW8 715 aa29.37■■■□□ 2.29
PACSIN3-207ENST00000530513 JDP2Q8WYK2 163 aa29.37■■■□□ 2.29
PACSIN3-207ENST00000530513 RBM17Q96I25 401 aaKnown RBP29.37■■■□□ 2.29
PACSIN3-207ENST00000530513 CRAMP1Q96RY5 1269 aa29.37■■■□□ 2.29
PACSIN3-207ENST00000530513 TCERG1O14776 1098 aaKnown RBP29.36■■■□□ 2.29
PACSIN3-207ENST00000530513 PPP1R42Q7Z4L9 355 aa29.36■■■□□ 2.29
PACSIN3-207ENST00000530513 LMOD3Q0VAK6 560 aa29.35■■■□□ 2.29
PACSIN3-207ENST00000530513 BABAM1Q9NWV8 329 aa29.35■■■□□ 2.29
PACSIN3-207ENST00000530513 CLEC11AQ9Y240 323 aa29.35■■■□□ 2.29
PACSIN3-207ENST00000530513 TAF1P21675 1872 aa29.35■■■□□ 2.29
PACSIN3-207ENST00000530513 CCDC146Q8IYE0 955 aa29.34■■■□□ 2.29
PACSIN3-207ENST00000530513 NECTIN2Q92692 538 aa29.34■■■□□ 2.29
PACSIN3-207ENST00000530513 DDX60Q8IY21 1712 aaKnown RBP29.34■■■□□ 2.29
PACSIN3-207ENST00000530513 PNMA8AQ86V59 439 aaPredicted RBP29.33■■■□□ 2.29
PACSIN3-207ENST00000530513 UTP14AQ9BVJ6 771 aaKnown RBP29.33■■■□□ 2.29
PACSIN3-207ENST00000530513 GJA3Q9Y6H8 435 aa29.33■■■□□ 2.29
PACSIN3-207ENST00000530513 MYBBP1AQ9BQG0 1328 aaKnown RBP29.32■■■□□ 2.28
PACSIN3-207ENST00000530513 EIF6P56537 245 aaKnown RBP29.32■■■□□ 2.28
PACSIN3-207ENST00000530513 KRT24Q2M2I5 525 aa29.32■■■□□ 2.28
PACSIN3-207ENST00000530513 MAP1SQ66K74 1059 aaPredicted RBP29.32■■■□□ 2.28
PACSIN3-207ENST00000530513 LARGE2Q8N3Y3 721 aa29.32■■■□□ 2.28
PACSIN3-207ENST00000530513 ABCC4O15439 1325 aa29.31■■■□□ 2.28
PACSIN3-207ENST00000530513 TMEM88BA6NKF7 163 aa29.31■■■□□ 2.28
PACSIN3-207ENST00000530513 CAPN15O75808 1086 aa29.31■■■□□ 2.28
PACSIN3-207ENST00000530513 GRIPAP1Q4V328 841 aa29.31■■■□□ 2.28
PACSIN3-207ENST00000530513 NLRP3Q96P20 1036 aa29.31■■■□□ 2.28
PACSIN3-207ENST00000530513 NEUROD2Q15784 382 aa29.3■■■□□ 2.28
PACSIN3-207ENST00000530513 COPS6Q7L5N1 327 aa29.3■■■□□ 2.28
PACSIN3-207ENST00000530513 XAGE3Q8WTP9 111 aa29.3■■■□□ 2.28
PACSIN3-207ENST00000530513 LRRC37AA6NMS7 1700 aa29.3■■■□□ 2.28
PACSIN3-207ENST00000530513 SCNN1DP51172 638 aa29.29■■■□□ 2.28
PACSIN3-207ENST00000530513 AIMP1Q12904 312 aaKnown RBP29.29■■■□□ 2.28
PACSIN3-207ENST00000530513 SLC10A5Q5PT55 438 aa29.29■■■□□ 2.28
PACSIN3-207ENST00000530513 TRPM7Q96QT4 1865 aa29.28■■■□□ 2.28
PACSIN3-207ENST00000530513 NLRP10Q86W26 655 aa29.28■■■□□ 2.28
PACSIN3-207ENST00000530513 CNTROBQ8N137 903 aa29.28■■■□□ 2.28
PACSIN3-207ENST00000530513 ATP6V0A2Q9Y487 856 aa29.28■■■□□ 2.28
PACSIN3-207ENST00000530513 DDX10Q13206 875 aaKnown RBP29.27■■■□□ 2.28
PACSIN3-207ENST00000530513 DUOX1Q9NRD9 1551 aa29.26■■■□□ 2.28
PACSIN3-207ENST00000530513 PPIP5K2O43314 1243 aa29.26■■■□□ 2.27
PACSIN3-207ENST00000530513 LMOD1P29536 600 aaPredicted RBP29.26■■■□□ 2.27
PACSIN3-207ENST00000530513 VEGFBP49765 207 aa29.26■■■□□ 2.27
PACSIN3-207ENST00000530513 AOC3Q16853 763 aa29.26■■■□□ 2.27
PACSIN3-207ENST00000530513 NIM1KQ8IY84 436 aa29.26■■■□□ 2.27
PACSIN3-207ENST00000530513 TRIM35Q9UPQ4 493 aa29.26■■■□□ 2.27
PACSIN3-207ENST00000530513 CHL1O00533 1208 aa29.25■■■□□ 2.27
PACSIN3-207ENST00000530513 HCLS1P14317 486 aaPredicted RBP29.25■■■□□ 2.27
PACSIN3-207ENST00000530513 EPS15P42566 896 aa29.25■■■□□ 2.27
PACSIN3-207ENST00000530513 HSP90AB3PQ58FF7 597 aa29.25■■■□□ 2.27
PACSIN3-207ENST00000530513 DDX21Q9NR30 783 aaKnown RBP eCLIP29.25■■■□□ 2.27
PACSIN3-207ENST00000530513 THSD7BQ9C0I4 1608 aa29.24■■■□□ 2.27
PACSIN3-207ENST00000530513 FOXN1O15353 648 aa29.24■■■□□ 2.27
PACSIN3-207ENST00000530513 CHPF2Q9P2E5 772 aa29.24■■■□□ 2.27
PACSIN3-207ENST00000530513 LAS1LQ9Y4W2 734 aaKnown RBP29.24■■■□□ 2.27
PACSIN3-207ENST00000530513 ZNF428Q96B54 188 aa29.23■■■□□ 2.27
PACSIN3-207ENST00000530513 RUNDC1Q96C34 613 aa29.23■■■□□ 2.27
PACSIN3-207ENST00000530513 COL4A1P02462 1669 aa29.22■■■□□ 2.27
PACSIN3-207ENST00000530513 TCIRG1Q13488 830 aa29.22■■■□□ 2.27
PACSIN3-207ENST00000530513 WDR43Q15061 677 aaKnown RBP eCLIP29.21■■■□□ 2.27
PACSIN3-207ENST00000530513 TMX4Q9H1E5 349 aaPredicted RBP29.21■■■□□ 2.27
PACSIN3-207ENST00000530513 TRMT112Q9UI30 125 aaKnown RBP29.21■■■□□ 2.27
PACSIN3-207ENST00000530513 SH3TC1Q8TE82 1336 aa29.2■■■□□ 2.27
PACSIN3-207ENST00000530513 RASSF10A6NK89 507 aa29.2■■■□□ 2.26
PACSIN3-207ENST00000530513 FMR1Q06787 632 aaKnown RBP eCLIP29.2■■■□□ 2.26
PACSIN3-207ENST00000530513 RTFDC1Q9BY42 306 aaPredicted RBP29.2■■■□□ 2.26
PACSIN3-207ENST00000530513 HDGFL1Q5TGJ6 251 aa29.19■■■□□ 2.26
PACSIN3-207ENST00000530513 DPP8Q6V1X1 898 aaPredicted RBP29.18■■■□□ 2.26
PACSIN3-207ENST00000530513 VPS33BQ9H267 617 aa29.18■■■□□ 2.26
PACSIN3-207ENST00000530513 BBOX1O75936 387 aa29.17■■■□□ 2.26
PACSIN3-207ENST00000530513 USP50Q70EL3 339 aaPredicted RBP29.17■■■□□ 2.26
PACSIN3-207ENST00000530513 DDX46Q7L014 1031 aaKnown RBP29.17■■■□□ 2.26
PACSIN3-207ENST00000530513 SP8Q8IXZ3 490 aa29.17■■■□□ 2.26
PACSIN3-207ENST00000530513 SUPT20HQ8NEM7 779 aa29.17■■■□□ 2.26
PACSIN3-207ENST00000530513 ZNRF3Q9ULT6 936 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms