RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TMPOP42166 694 aaKnown RBP22.94■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 CRAMP1Q96RY5 1269 aa22.94■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 TAF1DQ9H5J8 278 aaPredicted RBP22.94■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 HACL1Q9UJ83 578 aa22.94■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 ZNF541Q9H0D2 1346 aa22.93■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 FZD9O00144 591 aa22.93■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 NTSR2O95665 410 aa22.93■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 SUSD4Q5VX71 490 aa22.93■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 HSP90AB3PQ58FF7 597 aa22.92■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 OLFM4Q6UX06 510 aa22.92■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 PNMA8AQ86V59 439 aaPredicted RBP22.92■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 GPC2Q8N158 579 aa22.92■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 TMX4Q9H1E5 349 aaPredicted RBP22.92■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 EIF2S2P20042 333 aaKnown RBP22.91■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 ADAMTSL1Q8N6G6 1762 aa22.91■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 POTEIP0CG38 1075 aa22.9■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 POTEJP0CG39 1038 aa22.9■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 LRP10Q7Z4F1 713 aa22.9■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 NLRP3Q96P20 1036 aa22.9■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 PASKQ96RG2 1323 aa22.89■■□□□ 1.26
CKLF-CMTM1-202ENST00000527845 PPEF1O14829 653 aaPredicted RBP22.89■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 EIF6P56537 245 aaKnown RBP22.89■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 PDIA6Q15084 440 aa22.89■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 UTP14AQ9BVJ6 771 aaKnown RBP22.89■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 EPHX2P34913 555 aa22.88■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 HSPA1AP0DMV8 641 aaKnown RBP22.87■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 HSPA1BP0DMV9 641 aaKnown RBP22.87■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 EAPPQ56P03 285 aaPredicted RBP22.87■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 SLC10A5Q5PT55 438 aa22.87■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 VPS33BQ9H267 617 aa22.87■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 RUNDC1Q96C34 613 aa22.86■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 LMOD1P29536 600 aaPredicted RBP22.85■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 LARGE2Q8N3Y3 721 aa22.85■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 CLEC11AQ9Y240 323 aa22.85■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 LAMB2P55268 1798 aa22.85■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 CNTNAP1P78357 1384 aa22.85■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 CHL1O00533 1208 aa22.84■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 HOXB7P09629 217 aa22.84■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 COL13A1Q5TAT6 717 aaPredicted RBP22.84■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 SUPT20HQ8NEM7 779 aa22.84■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 TMEM88BA6NKF7 163 aa22.83■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 COPS6Q7L5N1 327 aa22.83■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 NIM1KQ8IY84 436 aa22.83■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 ATP6V0A2Q9Y487 856 aa22.83■■□□□ 1.25
CKLF-CMTM1-202ENST00000527845 COL4A5P29400 1685 aa22.83■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 ITGBL1O95965 494 aaPredicted RBP22.82■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 ANXA1P04083 346 aa22.82■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 MKRN1Q9UHC7 482 aaKnown RBP22.82■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 TCIRG1Q13488 830 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 C3orf67Q6ZVT6 689 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 NLRP10Q86W26 655 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 GJA3Q9Y6H8 435 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 PCNTO95613 3336 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 ABCC4O15439 1325 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 SH3TC1Q8TE82 1336 aa22.81■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 PPIP5K2O43314 1243 aa22.8■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 BBOX1O75936 387 aa22.8■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 AIMP1Q12904 312 aaKnown RBP22.8■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 TNS4Q8IZW8 715 aa22.8■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 TMC4Q7Z404 712 aa22.79■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 CNTROBQ8N137 903 aa22.79■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 NECTIN2Q92692 538 aa22.79■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 TRMT112Q9UI30 125 aaKnown RBP22.79■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 TRIM35Q9UPQ4 493 aa22.79■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 TCERG1O14776 1098 aaKnown RBP22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 LTBP1Q14766 1721 aa22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 HDGFL1Q5TGJ6 251 aa22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 DDX46Q7L014 1031 aaKnown RBP22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 SP8Q8IXZ3 490 aa22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 RTFDC1Q9BY42 306 aaPredicted RBP22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 LAS1LQ9Y4W2 734 aaKnown RBP22.78■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 USP50Q70EL3 339 aaPredicted RBP22.77■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 PLBD2Q8NHP8 589 aa22.77■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 CHPF2Q9P2E5 772 aa22.77■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 DBF4Q9UBU7 674 aaPredicted RBP22.77■■□□□ 1.24
CKLF-CMTM1-202ENST00000527845 SCNN1DP51172 638 aa22.76■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 MAP1SQ66K74 1059 aaPredicted RBP22.76■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 DPP8Q6V1X1 898 aaPredicted RBP22.76■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 LRRC37AA6NMS7 1700 aa22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 DDX60Q8IY21 1712 aaKnown RBP22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 GRAPQ13588 217 aa22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 AOC3Q16853 763 aa22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 GRAPLQ8TC17 118 aaPredicted RBP22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 HYPKQ9NX55 129 aa22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 ADAMTS8Q9UP79 889 aa22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 CDHR2Q9BYE9 1310 aa22.75■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 RASSF10A6NK89 507 aa22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 HCLS1P14317 486 aaPredicted RBP22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 CALD1Q05682 793 aaKnown RBP22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 KRT24Q2M2I5 525 aa22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 ANKRD13DQ6ZTN6 518 aa22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 MPNDQ8N594 471 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms