RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 RALBP1Q15311 655 aa15.45■□□□□ 0.06
NDUFS3-204ENST00000525378 FZD9O00144 591 aa15.44■□□□□ 0.06
NDUFS3-204ENST00000525378 TMPOP42166 694 aaKnown RBP15.44■□□□□ 0.06
NDUFS3-204ENST00000525378 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
NDUFS3-204ENST00000525378 C3orf67Q6ZVT6 689 aa15.44■□□□□ 0.06
NDUFS3-204ENST00000525378 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
NDUFS3-204ENST00000525378 HSPA1AP0DMV8 641 aaKnown RBP15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 HSPA1BP0DMV9 641 aaKnown RBP15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 HOXA10P31260 410 aaPredicted RBP15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 LDHDQ86WU2 507 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 PSMD1Q99460 953 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 TAF1P21675 1872 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 LTBP1Q14766 1721 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 PASKQ96RG2 1323 aa15.43■□□□□ 0.06
NDUFS3-204ENST00000525378 TCERG1O14776 1098 aaKnown RBP15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 EAPPQ56P03 285 aaPredicted RBP15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 PPP1R42Q7Z4L9 355 aa15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 MKRN1Q9UHC7 482 aaKnown RBP15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 HACL1Q9UJ83 578 aa15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 PCNTO95613 3336 aa15.42■□□□□ 0.06
NDUFS3-204ENST00000525378 EPHX2P34913 555 aa15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 PARP10Q53GL7 1025 aa15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 CC2D2BQ6DHV5 1058 aa15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 CRAMP1Q96RY5 1269 aa15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 BABAM1Q9NWV8 329 aa15.41■□□□□ 0.06
NDUFS3-204ENST00000525378 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
NDUFS3-204ENST00000525378 ITGBL1O95965 494 aaPredicted RBP15.4■□□□□ 0.06
NDUFS3-204ENST00000525378 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
NDUFS3-204ENST00000525378 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
NDUFS3-204ENST00000525378 MYBBP1AQ9BQG0 1328 aaKnown RBP15.4■□□□□ 0.06
NDUFS3-204ENST00000525378 LMOD3Q0VAK6 560 aa15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 GPC2Q8N158 579 aa15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 NLRP3Q96P20 1036 aa15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 UTP14AQ9BVJ6 771 aaKnown RBP15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
NDUFS3-204ENST00000525378 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
NDUFS3-204ENST00000525378 LARGE2Q8N3Y3 721 aa15.38■□□□□ 0.05
NDUFS3-204ENST00000525378 XAGE3Q8WTP9 111 aa15.38■□□□□ 0.05
NDUFS3-204ENST00000525378 TRIM35Q9UPQ4 493 aa15.38■□□□□ 0.05
NDUFS3-204ENST00000525378 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
NDUFS3-204ENST00000525378 CNTNAP1P78357 1384 aa15.37■□□□□ 0.05
NDUFS3-204ENST00000525378 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
NDUFS3-204ENST00000525378 CHL1O00533 1208 aa15.37■□□□□ 0.05
NDUFS3-204ENST00000525378 EIF6P56537 245 aaKnown RBP15.37■□□□□ 0.05
NDUFS3-204ENST00000525378 MAP1SQ66K74 1059 aaPredicted RBP15.37■□□□□ 0.05
NDUFS3-204ENST00000525378 ABCC4O15439 1325 aa15.37■□□□□ 0.05
NDUFS3-204ENST00000525378 TRPM7Q96QT4 1865 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 PNMA8AQ86V59 439 aaPredicted RBP15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 NLRP10Q86W26 655 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 TNS4Q8IZW8 715 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 LAS1LQ9Y4W2 734 aaKnown RBP15.36■□□□□ 0.05
NDUFS3-204ENST00000525378 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 EPS15P42566 896 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 SCNN1DP51172 638 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 TCIRG1Q13488 830 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 AOC3Q16853 763 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
NDUFS3-204ENST00000525378 PPIP5K2O43314 1243 aa15.34■□□□□ 0.05
NDUFS3-204ENST00000525378 NIM1KQ8IY84 436 aa15.34■□□□□ 0.05
NDUFS3-204ENST00000525378 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
NDUFS3-204ENST00000525378 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
NDUFS3-204ENST00000525378 CAPN15O75808 1086 aa15.33■□□□□ 0.04
NDUFS3-204ENST00000525378 VEGFBP49765 207 aa15.33■□□□□ 0.04
NDUFS3-204ENST00000525378 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
NDUFS3-204ENST00000525378 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
NDUFS3-204ENST00000525378 LRRC37AA6NMS7 1700 aa15.32■□□□□ 0.04
NDUFS3-204ENST00000525378 LMOD1P29536 600 aaPredicted RBP15.32■□□□□ 0.04
NDUFS3-204ENST00000525378 FMR1Q06787 632 aaKnown RBP eCLIP15.32■□□□□ 0.04
NDUFS3-204ENST00000525378 SP8Q8IXZ3 490 aa15.32■□□□□ 0.04
NDUFS3-204ENST00000525378 RTFDC1Q9BY42 306 aaPredicted RBP15.32■□□□□ 0.04
NDUFS3-204ENST00000525378 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
NDUFS3-204ENST00000525378 FOXN1O15353 648 aa15.31■□□□□ 0.04
NDUFS3-204ENST00000525378 BBOX1O75936 387 aa15.31■□□□□ 0.04
NDUFS3-204ENST00000525378 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
NDUFS3-204ENST00000525378 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
NDUFS3-204ENST00000525378 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
NDUFS3-204ENST00000525378 COL4A1P02462 1669 aa15.31■□□□□ 0.04
NDUFS3-204ENST00000525378 CXCL9Q07325 125 aa15.3■□□□□ 0.04
NDUFS3-204ENST00000525378 GRAPQ13588 217 aa15.3■□□□□ 0.04
NDUFS3-204ENST00000525378 DPP8Q6V1X1 898 aaPredicted RBP15.3■□□□□ 0.04
NDUFS3-204ENST00000525378 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
NDUFS3-204ENST00000525378 MPNDQ8N594 471 aa15.3■□□□□ 0.04
NDUFS3-204ENST00000525378 PLBD2Q8NHP8 589 aa15.3■□□□□ 0.04
NDUFS3-204ENST00000525378 GRAPLQ8TC17 118 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms