RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TCP11L2Q8N4U5 519 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 ZNF784Q8NCA9 323 aaPredicted RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 PDGFDQ9GZP0 370 aaPredicted RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 STRN4Q9NRL3 753 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 PCDHGC3Q9UN70 934 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 TRAK1Q9UPV9 953 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 THRAP3Q9Y2W1 955 aaKnown RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 DNMT3AQ9Y6K1 912 aaPredicted RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 USP19O94966 1318 aa8.91□□□□□ -0.98
PABPC1-207ENST00000518716 ZIC2O95409 532 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-207ENST00000518716 PTPRNQ16849 979 aa8.91□□□□□ -0.98
PABPC1-207ENST00000518716 ZNF385CQ66K41 422 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-207ENST00000518716 NUDT16Q96DE0 195 aaKnown RBP8.91□□□□□ -0.98
PABPC1-207ENST00000518716 ITPKCQ96DU7 683 aa8.91□□□□□ -0.98
PABPC1-207ENST00000518716 DNMT3LQ9UJW3 386 aa8.91□□□□□ -0.98
PABPC1-207ENST00000518716 CASZ1Q86V15 1759 aa8.91□□□□□ -0.98
PABPC1-207ENST00000518716 PHRF1Q9P1Y6 1649 aaKnown RBP8.91□□□□□ -0.98
PABPC1-207ENST00000518716 PTF1AQ7RTS3 328 aa8.9□□□□□ -0.98
PABPC1-207ENST00000518716 USP35Q9P2H5 1018 aa8.9□□□□□ -0.98
PABPC1-207ENST00000518716 RGPD3A6NKT7 1758 aaPredicted RBP8.9□□□□□ -0.98
PABPC1-207ENST00000518716 RGPD4Q7Z3J3 1758 aa8.9□□□□□ -0.98
PABPC1-207ENST00000518716 BCL9O00512 1426 aa8.89□□□□□ -0.99
PABPC1-207ENST00000518716 PARP4Q9UKK3 1724 aaKnown RBP8.89□□□□□ -0.99
PABPC1-207ENST00000518716 IGHA1P01876 353 aa8.89□□□□□ -0.99
PABPC1-207ENST00000518716 IRS1P35568 1242 aa8.89□□□□□ -0.99
PABPC1-207ENST00000518716 EVA1CP58658 441 aa8.89□□□□□ -0.99
PABPC1-207ENST00000518716 KCNH2Q12809 1159 aa8.89□□□□□ -0.99
PABPC1-207ENST00000518716 GPIHBP1Q8IV16 184 aa8.89□□□□□ -0.99
PABPC1-207ENST00000518716 PPP1R1BQ9UD71 204 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-207ENST00000518716 ACEP12821 1306 aa8.88□□□□□ -0.99
PABPC1-207ENST00000518716 NRKQ7Z2Y5 1582 aa8.88□□□□□ -0.99
PABPC1-207ENST00000518716 C6orf229H3BNL8 230 aa8.88□□□□□ -0.99
PABPC1-207ENST00000518716 NR3C2P08235 984 aa8.88□□□□□ -0.99
PABPC1-207ENST00000518716 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
PABPC1-207ENST00000518716 SBF2Q86WG5 1849 aa8.88□□□□□ -0.99
PABPC1-207ENST00000518716 COL5A2P05997 1499 aaPredicted RBP8.88□□□□□ -0.99
PABPC1-207ENST00000518716 GCP02774 474 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 FDX1P10109 184 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 BMP2P12643 396 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 MAP2K5Q13163 448 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 RNFT1Q5M7Z0 435 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 CDK15Q96Q40 435 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 SYT17Q9BSW7 474 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 CDK19Q9BWU1 502 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
PABPC1-207ENST00000518716 OVOS2A0A0G2JMS6 1433 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 OVOS2A0A0J9YW53 1432 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 OVOS2Q6IE36 1432 aa8.87□□□□□ -0.99
PABPC1-207ENST00000518716 TOPAZ1Q8N9V7 1692 aa8.86□□□□□ -0.99
PABPC1-207ENST00000518716 C1QTNF8P60827 252 aa8.86□□□□□ -0.99
PABPC1-207ENST00000518716 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
PABPC1-207ENST00000518716 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
PABPC1-207ENST00000518716 CRB1P82279 1406 aa8.86□□□□□ -0.99
PABPC1-207ENST00000518716 ITSN1Q15811 1721 aa8.85□□□□□ -0.99
PABPC1-207ENST00000518716 ZBTB7AO95365 584 aa8.85□□□□□ -0.99
PABPC1-207ENST00000518716 ABTB2Q8N961 1025 aa8.85□□□□□ -0.99
PABPC1-207ENST00000518716 MARCH10Q8NA82 808 aaPredicted RBP8.85□□□□□ -0.99
PABPC1-207ENST00000518716 FAM174AQ8TBP5 190 aa8.85□□□□□ -0.99
PABPC1-207ENST00000518716 ARHGEF28Q8N1W1 1705 aaKnown RBP8.85□□□□□ -0.99
PABPC1-207ENST00000518716 AATKQ6ZMQ8 1374 aa8.85□□□□□ -0.99
PABPC1-207ENST00000518716 MYOM1P52179 1685 aa8.85□□□□□ -0.99
PABPC1-207ENST00000518716 ARHGEF15O94989 841 aa8.84□□□□□ -0.99
PABPC1-207ENST00000518716 MEIOBQ8N635 442 aa8.84□□□□□ -0.99
PABPC1-207ENST00000518716 FHDC1Q9C0D6 1143 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-207ENST00000518716 FAM217BQ9NTX9 383 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-207ENST00000518716 MAP3K5Q99683 1374 aa8.84□□□□□ -0.99
PABPC1-207ENST00000518716 CHD4Q14839 1912 aa8.84□□□□□ -1
PABPC1-207ENST00000518716 COL18A1P39060 1754 aa8.84□□□□□ -1
PABPC1-207ENST00000518716 LRRC37A3O60309 1634 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 IRF6O14896 467 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 ARID5BQ14865 1188 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 SLC15A2Q16348 729 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 NLRP13Q86W25 1043 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 MTFR1LQ9H019 292 aa8.83□□□□□ -1
PABPC1-207ENST00000518716 BRD4O60885 1362 aaPredicted RBP8.83□□□□□ -1
PABPC1-207ENST00000518716 SLIT3O75094 1523 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 SLURP2P0DP57 97 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 GRM5P41594 1212 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 FOXK2Q01167 660 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 DDB1Q16531 1140 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 TXNRD1Q16881 649 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 FOXJ1Q92949 421 aa8.82□□□□□ -1
PABPC1-207ENST00000518716 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
PABPC1-207ENST00000518716 UPP2O95045 317 aa8.81□□□□□ -1
PABPC1-207ENST00000518716 PTSQ03393 145 aa8.81□□□□□ -1
PABPC1-207ENST00000518716 NR5A1Q13285 461 aa8.81□□□□□ -1
PABPC1-207ENST00000518716 PRR7Q8TB68 274 aa8.81□□□□□ -1
PABPC1-207ENST00000518716 NANOS1Q8WY41 292 aaKnown RBP8.81□□□□□ -1
PABPC1-207ENST00000518716 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
PABPC1-207ENST00000518716 GOLGB1Q14789 3259 aaKnown RBP8.81□□□□□ -1
PABPC1-207ENST00000518716 WDR17Q8IZU2 1322 aa8.8□□□□□ -1
PABPC1-207ENST00000518716 CEP350Q5VT06 3117 aa8.8□□□□□ -1
PABPC1-207ENST00000518716 KANK3Q6NY19 840 aa8.8□□□□□ -1
PABPC1-207ENST00000518716 ARHGEF25Q86VW2 580 aa8.8□□□□□ -1
PABPC1-207ENST00000518716 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
PABPC1-207ENST00000518716 STK32BQ9NY57 414 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms