RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
SPIDR-202ENST00000517619 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 ANXA1P04083 346 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
SPIDR-202ENST00000517619 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 PDIA6Q15084 440 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-202ENST00000517619 LRP10Q7Z4F1 713 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 PSMD1Q99460 953 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
SPIDR-202ENST00000517619 FZD9O00144 591 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 PPEF1O14829 653 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 CC2D2BQ6DHV5 1058 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 PPP1R42Q7Z4L9 355 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 SLC51AQ86UW1 340 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 JDP2Q8WYK2 163 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 RBM17Q96I25 401 aaKnown RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 TAF1P21675 1872 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 PASKQ96RG2 1323 aa12.56□□□□□ -0.4
SPIDR-202ENST00000517619 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
SPIDR-202ENST00000517619 DDX60Q8IY21 1712 aaKnown RBP12.55□□□□□ -0.4
SPIDR-202ENST00000517619 EPHX2P34913 555 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 DDX10Q13206 875 aaKnown RBP12.55□□□□□ -0.4
SPIDR-202ENST00000517619 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 GPC2Q8N158 579 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 CRAMP1Q96RY5 1269 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
SPIDR-202ENST00000517619 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
SPIDR-202ENST00000517619 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-202ENST00000517619 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
SPIDR-202ENST00000517619 AIMP1Q12904 312 aaKnown RBP12.53□□□□□ -0.4
SPIDR-202ENST00000517619 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 PNMA8AQ86V59 439 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-202ENST00000517619 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 CNTNAP1P78357 1384 aa12.53□□□□□ -0.4
SPIDR-202ENST00000517619 LRRC37AA6NMS7 1700 aa12.52□□□□□ -0.41
SPIDR-202ENST00000517619 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
SPIDR-202ENST00000517619 HSP90AB3PQ58FF7 597 aa12.52□□□□□ -0.41
SPIDR-202ENST00000517619 TNS4Q8IZW8 715 aa12.52□□□□□ -0.41
SPIDR-202ENST00000517619 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
SPIDR-202ENST00000517619 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-202ENST00000517619 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
SPIDR-202ENST00000517619 ABCC4O15439 1325 aa12.52□□□□□ -0.41
SPIDR-202ENST00000517619 TRPM7Q96QT4 1865 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 CHL1O00533 1208 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-202ENST00000517619 SCNN1DP51172 638 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 SLC10A5Q5PT55 438 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-202ENST00000517619 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
SPIDR-202ENST00000517619 CAPN15O75808 1086 aa12.5□□□□□ -0.41
SPIDR-202ENST00000517619 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-202ENST00000517619 AOC3Q16853 763 aa12.5□□□□□ -0.41
SPIDR-202ENST00000517619 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
SPIDR-202ENST00000517619 CNTROBQ8N137 903 aa12.5□□□□□ -0.41
SPIDR-202ENST00000517619 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
SPIDR-202ENST00000517619 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPIDR-202ENST00000517619 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
SPIDR-202ENST00000517619 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
SPIDR-202ENST00000517619 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
SPIDR-202ENST00000517619 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
SPIDR-202ENST00000517619 HDGFL1Q5TGJ6 251 aa12.49□□□□□ -0.41
SPIDR-202ENST00000517619 ADAMTS8Q9UP79 889 aa12.49□□□□□ -0.41
SPIDR-202ENST00000517619 EPS15P42566 896 aa12.48□□□□□ -0.41
SPIDR-202ENST00000517619 VEGFBP49765 207 aa12.48□□□□□ -0.41
SPIDR-202ENST00000517619 BBOX1O75936 387 aa12.47□□□□□ -0.41
SPIDR-202ENST00000517619 DPP8Q6V1X1 898 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-202ENST00000517619 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
SPIDR-202ENST00000517619 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
SPIDR-202ENST00000517619 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
SPIDR-202ENST00000517619 PLBD2Q8NHP8 589 aa12.47□□□□□ -0.41
SPIDR-202ENST00000517619 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-202ENST00000517619 COL4A1P02462 1669 aa12.47□□□□□ -0.41
SPIDR-202ENST00000517619 THSD7BQ9C0I4 1608 aa12.47□□□□□ -0.41
SPIDR-202ENST00000517619 RASSF10A6NK89 507 aa12.46□□□□□ -0.41
SPIDR-202ENST00000517619 FOXN1O15353 648 aa12.46□□□□□ -0.41
SPIDR-202ENST00000517619 HOXB7P09629 217 aa12.46□□□□□ -0.41
SPIDR-202ENST00000517619 GRAPQ13588 217 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms