RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 EIF2S2P20042 333 aaKnown RBP21.87■■□□□ 1.09
SRGAP3-209ENST00000490889 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
SRGAP3-209ENST00000490889 TMPOP42166 694 aaKnown RBP21.87■■□□□ 1.09
SRGAP3-209ENST00000490889 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
SRGAP3-209ENST00000490889 FZD9O00144 591 aa21.86■■□□□ 1.09
SRGAP3-209ENST00000490889 LDHDQ86WU2 507 aa21.86■■□□□ 1.09
SRGAP3-209ENST00000490889 PSMD1Q99460 953 aa21.86■■□□□ 1.09
SRGAP3-209ENST00000490889 PASKQ96RG2 1323 aa21.85■■□□□ 1.09
SRGAP3-209ENST00000490889 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
SRGAP3-209ENST00000490889 RNF123Q5XPI4 1314 aa21.84■■□□□ 1.09
SRGAP3-209ENST00000490889 HSPA1AP0DMV8 641 aaKnown RBP21.84■■□□□ 1.09
SRGAP3-209ENST00000490889 HSPA1BP0DMV9 641 aaKnown RBP21.84■■□□□ 1.09
SRGAP3-209ENST00000490889 CCDC146Q8IYE0 955 aa21.84■■□□□ 1.09
SRGAP3-209ENST00000490889 CREBZFQ9NS37 354 aa21.84■■□□□ 1.09
SRGAP3-209ENST00000490889 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
SRGAP3-209ENST00000490889 BABAM1Q9NWV8 329 aa21.83■■□□□ 1.09
SRGAP3-209ENST00000490889 HACL1Q9UJ83 578 aa21.83■■□□□ 1.09
SRGAP3-209ENST00000490889 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 KRT24Q2M2I5 525 aa21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 EAPPQ56P03 285 aaPredicted RBP21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 CC2D2BQ6DHV5 1058 aa21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 MKRN1Q9UHC7 482 aaKnown RBP21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 LTBP1Q14766 1721 aa21.82■■□□□ 1.08
SRGAP3-209ENST00000490889 TCERG1O14776 1098 aaKnown RBP21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 PPEF1O14829 653 aaPredicted RBP21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 ITGBL1O95965 494 aaPredicted RBP21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 EPHX2P34913 555 aa21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 PPP1R42Q7Z4L9 355 aa21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 RBM17Q96I25 401 aaKnown RBP21.81■■□□□ 1.08
SRGAP3-209ENST00000490889 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
SRGAP3-209ENST00000490889 LAMB2P55268 1798 aa21.8■■□□□ 1.08
SRGAP3-209ENST00000490889 LMOD3Q0VAK6 560 aa21.8■■□□□ 1.08
SRGAP3-209ENST00000490889 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
SRGAP3-209ENST00000490889 GPC2Q8N158 579 aa21.8■■□□□ 1.08
SRGAP3-209ENST00000490889 SLC10A5Q5PT55 438 aa21.79■■□□□ 1.08
SRGAP3-209ENST00000490889 COPS6Q7L5N1 327 aa21.79■■□□□ 1.08
SRGAP3-209ENST00000490889 XAGE3Q8WTP9 111 aa21.79■■□□□ 1.08
SRGAP3-209ENST00000490889 JDP2Q8WYK2 163 aa21.79■■□□□ 1.08
SRGAP3-209ENST00000490889 UTP14AQ9BVJ6 771 aaKnown RBP21.79■■□□□ 1.08
SRGAP3-209ENST00000490889 TRIM35Q9UPQ4 493 aa21.79■■□□□ 1.08
SRGAP3-209ENST00000490889 CHL1O00533 1208 aa21.78■■□□□ 1.08
SRGAP3-209ENST00000490889 AIMP1Q12904 312 aaKnown RBP21.78■■□□□ 1.08
SRGAP3-209ENST00000490889 NLRP3Q96P20 1036 aa21.78■■□□□ 1.08
SRGAP3-209ENST00000490889 CNTNAP1P78357 1384 aa21.77■■□□□ 1.08
SRGAP3-209ENST00000490889 CLEC11AQ9Y240 323 aa21.77■■□□□ 1.08
SRGAP3-209ENST00000490889 GJA3Q9Y6H8 435 aa21.77■■□□□ 1.08
SRGAP3-209ENST00000490889 ABCC4O15439 1325 aa21.77■■□□□ 1.07
SRGAP3-209ENST00000490889 MAP1SQ66K74 1059 aaPredicted RBP21.76■■□□□ 1.07
SRGAP3-209ENST00000490889 NLRP10Q86W26 655 aa21.76■■□□□ 1.07
SRGAP3-209ENST00000490889 LARGE2Q8N3Y3 721 aa21.76■■□□□ 1.07
SRGAP3-209ENST00000490889 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 SCNN1DP51172 638 aa21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 EIF6P56537 245 aaKnown RBP21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 GRIPAP1Q4V328 841 aa21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 PNMA8AQ86V59 439 aaPredicted RBP21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 RUNDC1Q96C34 613 aa21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 DDX21Q9NR30 783 aaKnown RBP eCLIP21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 ATP6V0A2Q9Y487 856 aa21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 LAS1LQ9Y4W2 734 aaKnown RBP21.75■■□□□ 1.07
SRGAP3-209ENST00000490889 TNS4Q8IZW8 715 aa21.74■■□□□ 1.07
SRGAP3-209ENST00000490889 CNTROBQ8N137 903 aa21.74■■□□□ 1.07
SRGAP3-209ENST00000490889 ZNF428Q96B54 188 aa21.74■■□□□ 1.07
SRGAP3-209ENST00000490889 CHPF2Q9P2E5 772 aa21.74■■□□□ 1.07
SRGAP3-209ENST00000490889 ADAMTS8Q9UP79 889 aa21.74■■□□□ 1.07
SRGAP3-209ENST00000490889 TMEM88BA6NKF7 163 aa21.73■■□□□ 1.07
SRGAP3-209ENST00000490889 TCIRG1Q13488 830 aa21.73■■□□□ 1.07
SRGAP3-209ENST00000490889 AOC3Q16853 763 aa21.73■■□□□ 1.07
SRGAP3-209ENST00000490889 HSP90AB3PQ58FF7 597 aa21.73■■□□□ 1.07
SRGAP3-209ENST00000490889 PPIP5K2O43314 1243 aa21.72■■□□□ 1.07
SRGAP3-209ENST00000490889 EPS15P42566 896 aa21.72■■□□□ 1.07
SRGAP3-209ENST00000490889 WDR43Q15061 677 aaKnown RBP eCLIP21.72■■□□□ 1.07
SRGAP3-209ENST00000490889 TAF1P21675 1872 aa21.72■■□□□ 1.07
SRGAP3-209ENST00000490889 VEGFBP49765 207 aa21.71■■□□□ 1.07
SRGAP3-209ENST00000490889 NIM1KQ8IY84 436 aa21.71■■□□□ 1.07
SRGAP3-209ENST00000490889 TRMT112Q9UI30 125 aaKnown RBP21.71■■□□□ 1.07
SRGAP3-209ENST00000490889 DDX60Q8IY21 1712 aaKnown RBP21.71■■□□□ 1.07
SRGAP3-209ENST00000490889 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
SRGAP3-209ENST00000490889 RTFDC1Q9BY42 306 aaPredicted RBP21.7■■□□□ 1.06
SRGAP3-209ENST00000490889 CAPN15O75808 1086 aa21.69■■□□□ 1.06
SRGAP3-209ENST00000490889 LMOD1P29536 600 aaPredicted RBP21.69■■□□□ 1.06
SRGAP3-209ENST00000490889 FMR1Q06787 632 aaKnown RBP eCLIP21.69■■□□□ 1.06
SRGAP3-209ENST00000490889 SH3TC1Q8TE82 1336 aa21.69■■□□□ 1.06
SRGAP3-209ENST00000490889 FOXN1O15353 648 aa21.68■■□□□ 1.06
SRGAP3-209ENST00000490889 BBOX1O75936 387 aa21.68■■□□□ 1.06
SRGAP3-209ENST00000490889 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
SRGAP3-209ENST00000490889 DUOX1Q9NRD9 1551 aa21.68■■□□□ 1.06
SRGAP3-209ENST00000490889 COL4A1P02462 1669 aa21.68■■□□□ 1.06
SRGAP3-209ENST00000490889 HOXB7P09629 217 aa21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 CXCL9Q07325 125 aa21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 GRAPQ13588 217 aa21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 PLBD2Q8NHP8 589 aa21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 ISCA1Q9BUE6 129 aa21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 TMX4Q9H1E5 349 aaPredicted RBP21.67■■□□□ 1.06
SRGAP3-209ENST00000490889 LRRC37AA6NMS7 1700 aa21.66■■□□□ 1.06
SRGAP3-209ENST00000490889 RASSF10A6NK89 507 aa21.66■■□□□ 1.06
SRGAP3-209ENST00000490889 DPP8Q6V1X1 898 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms